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The map label for this gene is yrbG [C]

Identifier: 114797416

GI number: 114797416

Start: 3262742

End: 3263701

Strand: Direct

Name: yrbG [C]

Synonym: HNE_3087

Alternate gene names: 114797416

Gene position: 3262742-3263701 (Clockwise)

Preceding gene: 114799495

Following gene: 114799961

Centisome position: 88.06

GC content: 61.88

Gene sequence:

>960_bases
ATGTTGCTCCTCTCCCTTCTGCTCGGCTTCGTTTTACTGGTGGCCGGTGGCGAACTTCTCGTCAAAGGCGCCGTCAAGCT
CGCTGAAAAGTTCAATATTTCGCCGCTTTTGATCGGTCTGACACTGGTTGGCTTCGGCACCTCGACGCCAGAGCTTGTAA
CCAGCCTTCAGGCTGCCTTTGCCGGCTCGCCCGGCATTGCCGTCGGCAATGTGGTGGGGTCCAACATTGCCAACATCCTC
TTCATCCTCGGCGCTGCGGCGCTCATCTCTCCGGTTGTGGTCGCCAAGGAAACCTTCAAGCGAGACGGCGTGGTTCTGGC
AGCCGCCACCCTACTCTGCCTCGGCGCGGTGATGTTCGGCCAGCTTACCCGCTGGATGGGCGCACTGTTCGTGCTCAGTC
TCGCCGGCTACATCTGGTTTGCGTTCCAGCAGGAGCGCACAGCCACAAAAACGGCGGCGGCAGCCAGTGGCGTGGCAGCT
CCGGCCTCCAAGCCTTCCGCAGGCGCCATCGTGCTGGACCTTCTCTTTGTGGCTGGCGGCCTGGCTCTGACGATAGCCGG
CGCGCGCTTCCTCGTCAGCGGGGCCATTGACCTTGCCCGCATGTTCTCGATCTCGGAAACCATCATTGGCCTGACCATCG
TGGCGGTTGGCACATCGCTGCCCGAACTGATCACCTCGGTGATGGCCTCCCTGCGCAAGCAGGGTGACATCGCCTTCGGC
AACATTGTGGGCTCCAACATCTACAACATACTCGGCATTCTCGGGGTGACCGCGATCGTCAAACCGATCCCCGTTCCCGC
CGAAATCCTGCGGCTCGACATCTGGGTGATGATTGCGGCGACGGCGCTGCTGGCTTTCGCAGCCATATCGCGCTGGCGCA
TCGGGCGAACCGAAGGCGCCGTCATGCTGCTGGCCTATGCAGGTTATGTCATCTGGCTTGGACTGCACGCTGGCGCCTGA

Upstream 100 bases:

>100_bases
CTGAAGCGTGAAGAGAGAGAATATTTCCCCGGCCCCTCCTTCCCCGCGCGCGCCTGATAGGCCAGATGTGGCGCAGATAA
TTTCGCACGGAACCCAAGGT

Downstream 100 bases:

>100_bases
CATGCGCGCGCCCCACCCCATCCTTCTGGTCTGCTTCGGCGTGGTCTTTGGCTGCGGCATTGATGCATTGATGAAGTCCG
TCATGCAGGGCTCTACAAGC

Product: K+-dependent Na+/Ca+ exchanger related-protein

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLLLSLLLGFVLLVAGGELLVKGAVKLAEKFNISPLLIGLTLVGFGTSTPELVTSLQAAFAGSPGIAVGNVVGSNIANIL
FILGAAALISPVVVAKETFKRDGVVLAAATLLCLGAVMFGQLTRWMGALFVLSLAGYIWFAFQQERTATKTAAAASGVAA
PASKPSAGAIVLDLLFVAGGLALTIAGARFLVSGAIDLARMFSISETIIGLTIVAVGTSLPELITSVMASLRKQGDIAFG
NIVGSNIYNILGILGVTAIVKPIPVPAEILRLDIWVMIAATALLAFAAISRWRIGRTEGAVMLLAYAGYVIWLGLHAGA

Sequences:

>Translated_319_residues
MLLLSLLLGFVLLVAGGELLVKGAVKLAEKFNISPLLIGLTLVGFGTSTPELVTSLQAAFAGSPGIAVGNVVGSNIANIL
FILGAAALISPVVVAKETFKRDGVVLAAATLLCLGAVMFGQLTRWMGALFVLSLAGYIWFAFQQERTATKTAAAASGVAA
PASKPSAGAIVLDLLFVAGGLALTIAGARFLVSGAIDLARMFSISETIIGLTIVAVGTSLPELITSVMASLRKQGDIAFG
NIVGSNIYNILGILGVTAIVKPIPVPAEILRLDIWVMIAATALLAFAAISRWRIGRTEGAVMLLAYAGYVIWLGLHAGA
>Mature_319_residues
MLLLSLLLGFVLLVAGGELLVKGAVKLAEKFNISPLLIGLTLVGFGTSTPELVTSLQAAFAGSPGIAVGNVVGSNIANIL
FILGAAALISPVVVAKETFKRDGVVLAAATLLCLGAVMFGQLTRWMGALFVLSLAGYIWFAFQQERTATKTAAAASGVAA
PASKPSAGAIVLDLLFVAGGLALTIAGARFLVSGAIDLARMFSISETIIGLTIVAVGTSLPELITSVMASLRKQGDIAFG
NIVGSNIYNILGILGVTAIVKPIPVPAEILRLDIWVMIAATALLAFAAISRWRIGRTEGAVMLLAYAGYVIWLGLHAGA

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=300, Percent_Identity=34, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 32729; Mature: 32729

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLSLLLGFVLLVAGGELLVKGAVKLAEKFNISPLLIGLTLVGFGTSTPELVTSLQAAF
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
AGSPGIAVGNVVGSNIANILFILGAAALISPVVVAKETFKRDGVVLAAATLLCLGAVMFG
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QLTRWMGALFVLSLAGYIWFAFQQERTATKTAAAASGVAAPASKPSAGAIVLDLLFVAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
LALTIAGARFLVSGAIDLARMFSISETIIGLTIVAVGTSLPELITSVMASLRKQGDIAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEH
NIVGSNIYNILGILGVTAIVKPIPVPAEILRLDIWVMIAATALLAFAAISRWRIGRTEGA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
VMLLAYAGYVIWLGLHAGA
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLLLSLLLGFVLLVAGGELLVKGAVKLAEKFNISPLLIGLTLVGFGTSTPELVTSLQAAF
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
AGSPGIAVGNVVGSNIANILFILGAAALISPVVVAKETFKRDGVVLAAATLLCLGAVMFG
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QLTRWMGALFVLSLAGYIWFAFQQERTATKTAAAASGVAAPASKPSAGAIVLDLLFVAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
LALTIAGARFLVSGAIDLARMFSISETIIGLTIVAVGTSLPELITSVMASLRKQGDIAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEH
NIVGSNIYNILGILGVTAIVKPIPVPAEILRLDIWVMIAATALLAFAAISRWRIGRTEGA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
VMLLAYAGYVIWLGLHAGA
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]