| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797393
Identifier: 114797393
GI number: 114797393
Start: 739198
End: 740850
Strand: Reverse
Name: 114797393
Synonym: HNE_0726
Alternate gene names: NA
Gene position: 740850-739198 (Counterclockwise)
Preceding gene: 114800096
Following gene: 114797948
Centisome position: 20.0
GC content: 62.73
Gene sequence:
>1653_bases GTGCCGGAACATCCGCATGGGAAGAGACCTCGCCCGCTTGGTTTACAAGTTGGAAAAAAACCTATCGGTACAGCCTTGGC TTTGCAACCACGCCCGGCTGCTGCTAGCGGTCGCGTTCCATTATCGGCAGGTTTGTATGAGTATGCGCCGCGTGGGGACA GTTCAGTGACAGATGAAACCGGAAAAGACGCCGGAGATATGGGCGCCTCTGACAGCCCACCAGACGCTGTGGACGCGACC GTTAGCGTGACGTCTCCCGTCAGCGGCGTCAGCGAAGCGATTACCGCAGGCGCGTCCTTTCTGGTTACAGCCACCAACTG GCGCGCCCGGAAGCTGCGCCGGGGCGTCAAGATCGAGCTGCCCGCCTATCTCGGCGTCCAATGCAGCTGGTTCATGGCGT TCGGGCTTCAGCTTGTCCTGTTCCCCTATCTGATCACCGGGCGTAGCCACCTCCATCTCGACGGTCTGGCGCTGGGCCTC GCAAACATGGCGCTGTCGGCCCCTTCAGTGGTGTTCCTGCTGATCGGCGGGGTTGTGGCAGAGCGCGCCGATGGTCGCCG CCTGCTGATCCTGCTGCACCTTCTGGCGGCGGTGCCCTCGATGTTCCTGGCCTTGGCCGTCTCGCGCGGTGATCTCAGCT ATCCGGCAATGATCTTCTACGCGGTCAGCATCGGCACCATTGGCGCCTTCATGATGCCCGCGCGCGACGCCATCGTGAAC GAAGTGGTGGAACGGCGCATGCGCGTCGGCTCCGGCGTGACCCTGCAGCTGGGCGTAACACTTGCCACCATGGCGCAGTT CCTGGCCCAGATCGGCGGCCTGATCCTTGCCGGATATGCTGACAAGGCGACCCGTATGCCGACCTGGCTCGGCGGCTTTT CGGTTGGCCCGATTTCGGCCGAGACGCTTTTGATTGCTCAGGGCGGAGCGCTTGCTTTGGGCGCGGGCTTTGCCCTTTTC ATGGCGCGCGGGAAGCAGATCCGCACGGGCCGCAAGGGAATCGGCGCGGCTTTCGGGGACATTCTGGACGGGGTCAAGGC TGTGCGCAGCGATGGCAAGCTCTCGGCCATGACGATGCTCATGTTCGGCGTCGGCGTCTTCGTGATCGGCTCCTTCCTGG TGGTGCTGCCGATCATCAACCGCGATGTCTATCATTTCGGCTCATCCGGCATTCGAGACATGTTCGTCACCTTCTGGATG GGCGCCTTCGCCTCTTCTGTGGTGCTGGCGATCTTCCGGCGGATCAAGCGCCAGGGGCGCCTTCTGCTGATTGCCCAGTT CATTGCCTCAGCCGCCATGATCCCGATGCTTTGGGTGGTGCCGCACTGGGCGTTCCTGATGATCGTGTTTATCTGGGGCA ATGCCGCCGGCATCTCGATCGCGATGAGCCGATCAATCGTGCAGGATGCCGCGCCCAAGGAAAAGCTCGCCCGCGTGCTC TCTATCTACCAGCTGGGCTTCATGGCCGGCGCGCCGTTTGGGGCCGCCCTGATGGGCCTCCTGGTCGACATGTTCGGCCC GCAGAAGATTGCCGTGGTGCCGGCGGGGGGCATGATCGCGCTGATCCTCTGGATGATCTTCTTCACACCGGTCTGGAATA TGAAGGGCTCAGCCTGGCTGGCACACAACGAAGGCGGCAAGCAGGCAGGATGA
Upstream 100 bases:
>100_bases CGAAGAATTTCACCTCGCCCGGAACCGGGTTCGGCCAGGGATGCAGCGTCAGATGGAGAAACATGGCTGCCAGGGCGAGG GCGAGCCCCCAGCTGACCGC
Downstream 100 bases:
>100_bases CAACGGGCTGAAACTCGCCTAGCGGTGAGCCCATGAGCCAGATGCCCCGCGCCACCGTGCTGACCGGTAATATTGCCGAC AATTGGAGAACCCTGGACGC
Product: major facilitator family protein
Products: NA
Alternate protein names: Transporter Facilitator Family; Facilitator Family Protein
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MPEHPHGKRPRPLGLQVGKKPIGTALALQPRPAAASGRVPLSAGLYEYAPRGDSSVTDETGKDAGDMGASDSPPDAVDAT VSVTSPVSGVSEAITAGASFLVTATNWRARKLRRGVKIELPAYLGVQCSWFMAFGLQLVLFPYLITGRSHLHLDGLALGL ANMALSAPSVVFLLIGGVVAERADGRRLLILLHLLAAVPSMFLALAVSRGDLSYPAMIFYAVSIGTIGAFMMPARDAIVN EVVERRMRVGSGVTLQLGVTLATMAQFLAQIGGLILAGYADKATRMPTWLGGFSVGPISAETLLIAQGGALALGAGFALF MARGKQIRTGRKGIGAAFGDILDGVKAVRSDGKLSAMTMLMFGVGVFVIGSFLVVLPIINRDVYHFGSSGIRDMFVTFWM GAFASSVVLAIFRRIKRQGRLLLIAQFIASAAMIPMLWVVPHWAFLMIVFIWGNAAGISIAMSRSIVQDAAPKEKLARVL SIYQLGFMAGAPFGAALMGLLVDMFGPQKIAVVPAGGMIALILWMIFFTPVWNMKGSAWLAHNEGGKQAG
Sequences:
>Translated_550_residues MPEHPHGKRPRPLGLQVGKKPIGTALALQPRPAAASGRVPLSAGLYEYAPRGDSSVTDETGKDAGDMGASDSPPDAVDAT VSVTSPVSGVSEAITAGASFLVTATNWRARKLRRGVKIELPAYLGVQCSWFMAFGLQLVLFPYLITGRSHLHLDGLALGL ANMALSAPSVVFLLIGGVVAERADGRRLLILLHLLAAVPSMFLALAVSRGDLSYPAMIFYAVSIGTIGAFMMPARDAIVN EVVERRMRVGSGVTLQLGVTLATMAQFLAQIGGLILAGYADKATRMPTWLGGFSVGPISAETLLIAQGGALALGAGFALF MARGKQIRTGRKGIGAAFGDILDGVKAVRSDGKLSAMTMLMFGVGVFVIGSFLVVLPIINRDVYHFGSSGIRDMFVTFWM GAFASSVVLAIFRRIKRQGRLLLIAQFIASAAMIPMLWVVPHWAFLMIVFIWGNAAGISIAMSRSIVQDAAPKEKLARVL SIYQLGFMAGAPFGAALMGLLVDMFGPQKIAVVPAGGMIALILWMIFFTPVWNMKGSAWLAHNEGGKQAG >Mature_549_residues PEHPHGKRPRPLGLQVGKKPIGTALALQPRPAAASGRVPLSAGLYEYAPRGDSSVTDETGKDAGDMGASDSPPDAVDATV SVTSPVSGVSEAITAGASFLVTATNWRARKLRRGVKIELPAYLGVQCSWFMAFGLQLVLFPYLITGRSHLHLDGLALGLA NMALSAPSVVFLLIGGVVAERADGRRLLILLHLLAAVPSMFLALAVSRGDLSYPAMIFYAVSIGTIGAFMMPARDAIVNE VVERRMRVGSGVTLQLGVTLATMAQFLAQIGGLILAGYADKATRMPTWLGGFSVGPISAETLLIAQGGALALGAGFALFM ARGKQIRTGRKGIGAAFGDILDGVKAVRSDGKLSAMTMLMFGVGVFVIGSFLVVLPIINRDVYHFGSSGIRDMFVTFWMG AFASSVVLAIFRRIKRQGRLLLIAQFIASAAMIPMLWVVPHWAFLMIVFIWGNAAGISIAMSRSIVQDAAPKEKLARVLS IYQLGFMAGAPFGAALMGLLVDMFGPQKIAVVPAGGMIALILWMIFFTPVWNMKGSAWLAHNEGGKQAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58172; Mature: 58041
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEHPHGKRPRPLGLQVGKKPIGTALALQPRPAAASGRVPLSAGLYEYAPRGDSSVTDET CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC GKDAGDMGASDSPPDAVDATVSVTSPVSGVSEAITAGASFLVTATNWRARKLRRGVKIEL CCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEE PAYLGVQCSWFMAFGLQLVLFPYLITGRSHLHLDGLALGLANMALSAPSVVFLLIGGVVA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHH ERADGRRLLILLHLLAAVPSMFLALAVSRGDLSYPAMIFYAVSIGTIGAFMMPARDAIVN HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EVVERRMRVGSGVTLQLGVTLATMAQFLAQIGGLILAGYADKATRMPTWLGGFSVGPISA HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCC ETLLIAQGGALALGAGFALFMARGKQIRTGRKGIGAAFGDILDGVKAVRSDGKLSAMTML CEEEEECCCCEEHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH MFGVGVFVIGSFLVVLPIINRDVYHFGSSGIRDMFVTFWMGAFASSVVLAIFRRIKRQGR HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LLLIAQFIASAAMIPMLWVVPHWAFLMIVFIWGNAAGISIAMSRSIVQDAAPKEKLARVL EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH SIYQLGFMAGAPFGAALMGLLVDMFGPQKIAVVPAGGMIALILWMIFFTPVWNMKGSAWL HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEE AHNEGGKQAG EECCCCCCCC >Mature Secondary Structure PEHPHGKRPRPLGLQVGKKPIGTALALQPRPAAASGRVPLSAGLYEYAPRGDSSVTDET CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC GKDAGDMGASDSPPDAVDATVSVTSPVSGVSEAITAGASFLVTATNWRARKLRRGVKIEL CCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEE PAYLGVQCSWFMAFGLQLVLFPYLITGRSHLHLDGLALGLANMALSAPSVVFLLIGGVVA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHH ERADGRRLLILLHLLAAVPSMFLALAVSRGDLSYPAMIFYAVSIGTIGAFMMPARDAIVN HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EVVERRMRVGSGVTLQLGVTLATMAQFLAQIGGLILAGYADKATRMPTWLGGFSVGPISA HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCC ETLLIAQGGALALGAGFALFMARGKQIRTGRKGIGAAFGDILDGVKAVRSDGKLSAMTML CEEEEECCCCEEHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH MFGVGVFVIGSFLVVLPIINRDVYHFGSSGIRDMFVTFWMGAFASSVVLAIFRRIKRQGR HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LLLIAQFIASAAMIPMLWVVPHWAFLMIVFIWGNAAGISIAMSRSIVQDAAPKEKLARVL EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH SIYQLGFMAGAPFGAALMGLLVDMFGPQKIAVVPAGGMIALILWMIFFTPVWNMKGSAWL HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEE AHNEGGKQAG EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA