Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797380

Identifier: 114797380

GI number: 114797380

Start: 1723237

End: 1723896

Strand: Reverse

Name: 114797380

Synonym: HNE_1677

Alternate gene names: NA

Gene position: 1723896-1723237 (Counterclockwise)

Preceding gene: 114800241

Following gene: 114798244

Centisome position: 46.53

GC content: 63.94

Gene sequence:

>660_bases
ATGGCCAACGAAGCGCATAAAGAACCGACGATGGAGGAAATCCTCGCATCGATCCGCAAGATCATCGCGGATGACGGCCC
TGCCCCGACTGCGGGCCAGCCGGTCATGCGGGACGCAGCGCCGGAGAGCGCCGGCAGCCGCCCGAACTTCTCCTATGATA
ACGACGCCGATGACCTCGGCATGTTCGAGGGTGACGAGCCCGATCTGGCAGACGACATCGCCGATGAAATCGCCGAAGAG
TTCACGACCGAGATCAAGGGCCCGGAATTCTCCTTCGAAGCGATTCTCGGCGCATCGAAGGCGCGTGAGGCCGAGCCCGC
CCCAGCGCCACTGCCCGAACCCGAGCCTGAACCCTATCGCCCAGCCGCCCAACCTGTGGCCCGCGCCTTTCAACCCGCAC
CCGAACCGGAGCCCAAGATGCCCGCCGCCCCGCGCTATGCGAATGAGCCGCTGACTGACGCAAATACGGCCGAATCGGCC
GCTGGTGCGCTGGGCAAGCTGATCTCCAAGATGGACATGGGCAGCGACAACACGCTGGAAGGCCTGGTGCGCGAACTGCT
CAAGCCGATGGTCAAGGAATGGCTCGATGCCAACCTCGCCCGTATCGTCGAAGAGAAGGTAGAAGCCGAAGTACAGCGGA
TTGCCCGCATGGCGCGCTAG

Upstream 100 bases:

>100_bases
TACACCGGGGCCCTGAGCGTTAACGATGTCAAACGCTTGTTAACCCCACCACCCTATCGGTGGTATTCAGAGATTGTGAT
TCCACCAGCGAGGGGCTGAG

Downstream 100 bases:

>100_bases
CCTCATCCCTCAAACTTGCTATAGGGAACGGCGCGCCTTCACAGGCGCGCTTTTTCTTTTTGCCCTGCCCGTAAAGCCCA
TAAGAACCGATGCTTGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLGMFEGDEPDLADDIADEIAEE
FTTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYRPAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESA
AGALGKLISKMDMGSDNTLEGLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR

Sequences:

>Translated_219_residues
MANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLGMFEGDEPDLADDIADEIAEE
FTTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYRPAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESA
AGALGKLISKMDMGSDNTLEGLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR
>Mature_218_residues
ANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLGMFEGDEPDLADDIADEIAEEF
TTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYRPAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESAA
GALGKLISKMDMGSDNTLEGLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR

Specific function: Unknown

COG id: COG3827

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23648; Mature: 23516

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLG
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCC
MFEGDEPDLADDIADEIAEEFTTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESAAGALGKLISKMDMGSDNTLE
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
GLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLG
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCC
MFEGDEPDLADDIADEIAEEFTTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESAAGALGKLISKMDMGSDNTLE
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
GLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA