| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797380
Identifier: 114797380
GI number: 114797380
Start: 1723237
End: 1723896
Strand: Reverse
Name: 114797380
Synonym: HNE_1677
Alternate gene names: NA
Gene position: 1723896-1723237 (Counterclockwise)
Preceding gene: 114800241
Following gene: 114798244
Centisome position: 46.53
GC content: 63.94
Gene sequence:
>660_bases ATGGCCAACGAAGCGCATAAAGAACCGACGATGGAGGAAATCCTCGCATCGATCCGCAAGATCATCGCGGATGACGGCCC TGCCCCGACTGCGGGCCAGCCGGTCATGCGGGACGCAGCGCCGGAGAGCGCCGGCAGCCGCCCGAACTTCTCCTATGATA ACGACGCCGATGACCTCGGCATGTTCGAGGGTGACGAGCCCGATCTGGCAGACGACATCGCCGATGAAATCGCCGAAGAG TTCACGACCGAGATCAAGGGCCCGGAATTCTCCTTCGAAGCGATTCTCGGCGCATCGAAGGCGCGTGAGGCCGAGCCCGC CCCAGCGCCACTGCCCGAACCCGAGCCTGAACCCTATCGCCCAGCCGCCCAACCTGTGGCCCGCGCCTTTCAACCCGCAC CCGAACCGGAGCCCAAGATGCCCGCCGCCCCGCGCTATGCGAATGAGCCGCTGACTGACGCAAATACGGCCGAATCGGCC GCTGGTGCGCTGGGCAAGCTGATCTCCAAGATGGACATGGGCAGCGACAACACGCTGGAAGGCCTGGTGCGCGAACTGCT CAAGCCGATGGTCAAGGAATGGCTCGATGCCAACCTCGCCCGTATCGTCGAAGAGAAGGTAGAAGCCGAAGTACAGCGGA TTGCCCGCATGGCGCGCTAG
Upstream 100 bases:
>100_bases TACACCGGGGCCCTGAGCGTTAACGATGTCAAACGCTTGTTAACCCCACCACCCTATCGGTGGTATTCAGAGATTGTGAT TCCACCAGCGAGGGGCTGAG
Downstream 100 bases:
>100_bases CCTCATCCCTCAAACTTGCTATAGGGAACGGCGCGCCTTCACAGGCGCGCTTTTTCTTTTTGCCCTGCCCGTAAAGCCCA TAAGAACCGATGCTTGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLGMFEGDEPDLADDIADEIAEE FTTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYRPAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESA AGALGKLISKMDMGSDNTLEGLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR
Sequences:
>Translated_219_residues MANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLGMFEGDEPDLADDIADEIAEE FTTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYRPAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESA AGALGKLISKMDMGSDNTLEGLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR >Mature_218_residues ANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLGMFEGDEPDLADDIADEIAEEF TTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYRPAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESAA GALGKLISKMDMGSDNTLEGLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR
Specific function: Unknown
COG id: COG3827
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23648; Mature: 23516
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLG CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCC MFEGDEPDLADDIADEIAEEFTTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYR CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESAAGALGKLISKMDMGSDNTLE CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH GLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure ANEAHKEPTMEEILASIRKIIADDGPAPTAGQPVMRDAAPESAGSRPNFSYDNDADDLG CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCC MFEGDEPDLADDIADEIAEEFTTEIKGPEFSFEAILGASKAREAEPAPAPLPEPEPEPYR CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PAAQPVARAFQPAPEPEPKMPAAPRYANEPLTDANTAESAAGALGKLISKMDMGSDNTLE CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH GLVRELLKPMVKEWLDANLARIVEEKVEAEVQRIARMAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA