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The map label for this gene is copB [H]

Identifier: 114797294

GI number: 114797294

Start: 1513670

End: 1514467

Strand: Reverse

Name: copB [H]

Synonym: HNE_1484

Alternate gene names: 114797294

Gene position: 1514467-1513670 (Counterclockwise)

Preceding gene: 114798342

Following gene: 114797834

Centisome position: 40.88

GC content: 58.15

Gene sequence:

>798_bases
ATGAAACGCGCGCATTTCATTGCATCATTCTTCATGCTCTCTCCGCTCGTATTCTCGTCTGCTGTTGCGCAAGAGACGCC
CGTCCCGGGCTCACAAGCCGAAGCCTATTGGGACAAGGACGACTTCAAGGCGTCCCAGGACGCTTTGAAAAGGGAGCATG
GCGGCGCAGCAACGCTGTTCGTTCTAGCTGACCGTTTTGAGTACCAGGCGAGTGATGACGCGCCTGCTCTGCTGCTTGAA
GGCCAGGGACGGTGGGGAACAGACGAGAATCGTCTATTGATCAAGTCTGAGCTTGAATACGATCTCGATGCCGGCGCATT
TGAGGAAGCCGAAGTCCAGGCGCTCTGGTCCCGGCCAATAGCACGCTATTTCGATGTGCAGGCAGGTGTTCGGCATGATT
TCGAACCGGGTCCGTCCCGCACTTACGCAGTCGCAGGCATTCAGGGGCTTGCCCCTTACTGGTTCGAGGTCGACGGCGCG
GTATTCCTGAGTGAAGAAGGCGATCTCTCTGCCCGCTTTGAAGCTGAGTATGAGGTCTCGCTGACACAGCGCCTGATACT
CCAGCCGCGTTCAGAATTGAACTTCGCGGCTGAGGACGTACCCGAGTTCGAAACGGGCGCAGGGCTTTCGACGGCCGAGA
TTGGCCTGCGCCTGCGCTATGAGATTGATCGTCAGTTCGCCCCCTATGTCGGGGTCAACTGGAAAGCCTCAACTGGCAAG
ACCGCAGACTACATCCGCGCCCGGGGGGAACACACCGAAACGCTCTCCTTCGTCACCGGCATCAGGCTCTGGTTCTGA

Upstream 100 bases:

>100_bases
CTCCCCACAAAGGGCACGAGCCTGCCGTTCCTCCGTCAGAGGAGGACATTCCGACCACGGAAACTCCAACGCCGGACAGG
CAACATGAAGGGCACCACTG

Downstream 100 bases:

>100_bases
ACCATGCTCACTCAGCATCCCAAGAGGCCGGCGGCCACTATGAAATCATCCACACCCACGGGTCGCAGGCGAGATGCGAC
AGATGATTATTGCGCATGAA

Product: copper resistance protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKRAHFIASFFMLSPLVFSSAVAQETPVPGSQAEAYWDKDDFKASQDALKREHGGAATLFVLADRFEYQASDDAPALLLE
GQGRWGTDENRLLIKSELEYDLDAGAFEEAEVQALWSRPIARYFDVQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGA
VFLSEEGDLSARFEAEYEVSLTQRLILQPRSELNFAAEDVPEFETGAGLSTAEIGLRLRYEIDRQFAPYVGVNWKASTGK
TADYIRARGEHTETLSFVTGIRLWF

Sequences:

>Translated_265_residues
MKRAHFIASFFMLSPLVFSSAVAQETPVPGSQAEAYWDKDDFKASQDALKREHGGAATLFVLADRFEYQASDDAPALLLE
GQGRWGTDENRLLIKSELEYDLDAGAFEEAEVQALWSRPIARYFDVQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGA
VFLSEEGDLSARFEAEYEVSLTQRLILQPRSELNFAAEDVPEFETGAGLSTAEIGLRLRYEIDRQFAPYVGVNWKASTGK
TADYIRARGEHTETLSFVTGIRLWF
>Mature_265_residues
MKRAHFIASFFMLSPLVFSSAVAQETPVPGSQAEAYWDKDDFKASQDALKREHGGAATLFVLADRFEYQASDDAPALLLE
GQGRWGTDENRLLIKSELEYDLDAGAFEEAEVQALWSRPIARYFDVQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGA
VFLSEEGDLSARFEAEYEVSLTQRLILQPRSELNFAAEDVPEFETGAGLSTAEIGLRLRYEIDRQFAPYVGVNWKASTGK
TADYIRARGEHTETLSFVTGIRLWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 29655; Mature: 29655

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAHFIASFFMLSPLVFSSAVAQETPVPGSQAEAYWDKDDFKASQDALKREHGGAATLF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCEEEEE
VLADRFEYQASDDAPALLLEGQGRWGTDENRLLIKSELEYDLDAGAFEEAEVQALWSRPI
EEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCHH
ARYFDVQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGAVFLSEEGDLSARFEAEYEVS
HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCCEEEECEEEHH
LTQRLILQPRSELNFAAEDVPEFETGAGLSTAEIGLRLRYEIDRQFAPYVGVNWKASTGK
HHHHHHHCCCHHCCCCHHCCCCCCCCCCCCHHHHCEEEEEEECCCCCCEECCEEECCCCC
TADYIRARGEHTETLSFVTGIRLWF
CHHHHHHCCCCHHHHHHHHHHEECC
>Mature Secondary Structure
MKRAHFIASFFMLSPLVFSSAVAQETPVPGSQAEAYWDKDDFKASQDALKREHGGAATLF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCEEEEE
VLADRFEYQASDDAPALLLEGQGRWGTDENRLLIKSELEYDLDAGAFEEAEVQALWSRPI
EEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCHH
ARYFDVQAGVRHDFEPGPSRTYAVAGIQGLAPYWFEVDGAVFLSEEGDLSARFEAEYEVS
HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCCEEEECEEEHH
LTQRLILQPRSELNFAAEDVPEFETGAGLSTAEIGLRLRYEIDRQFAPYVGVNWKASTGK
HHHHHHHCCCHHCCCCHHCCCCCCCCCCCCHHHHCEEEEEEECCCCCCEECCEEECCCCC
TADYIRARGEHTETLSFVTGIRLWF
CHHHHHHCCCCHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]