| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is pkn3 [H]
Identifier: 114797276
GI number: 114797276
Start: 1268227
End: 1270851
Strand: Direct
Name: pkn3 [H]
Synonym: HNE_1246
Alternate gene names: 114797276
Gene position: 1268227-1270851 (Clockwise)
Preceding gene: 114799288
Following gene: 114798527
Centisome position: 34.23
GC content: 68.5
Gene sequence:
>2625_bases GTGGAGCTGGAGCGCCGGCCGCTGGAGGTGCTGAGCCTGCTGCTGCGCCATGCCGGGGAGGTGGTGACGAAGGAGGAGCT GCTCGACACGGTCTGGCAGGGGCGGATCACGGTCGAGAATGTGCTGGCCAATGCCGTGGCCAAGCTGCGCAAGGGGCTGG GCGAAGCGCTGGCCGAACACATCCGCACCCAGGCGCGCATCGGTTACCGCTTTACCGGGCCGGTGGAGCGGATCGCGGTG GGGCGGGCGCTGGTCAACCGGCTGGACCTGCGCGCCGGGCAGCCCGTGCCGGGGCGCAGCCATTTCATGCTGAAGGAACA GCTTTCCGGAACCAGGGGCAGCGAAGTGTGGCTGGCCCGGCATGACAAGACCGGGGAGCTGCGGGTTTACAAGTTCAGCC CGGATGGCGCGCGGCTGGCCTCGCTGAAGCGGGAGGCGACGCTGGCGCGGGTGCTGCGCGAGAGCCTGGGCGAGCGGGAC GATATTGCGCGGGTGATCGACTGGAATTTCGAGACGGCGCCGTTCTTTCTGGAATGCGCGTATGGCGGGGAGAACCTGCT GGCATGGTCGCAGGGCGAGGGGCGGCTGGCGGCGATGTCGCAAGGGGCGCGGCTGGAGCTGGCGTTGCAGGCGATTGATG TGGTGGGCGCCGCGCATGAGGCGGGGGTGCTGCACAAGGATCTGAAGCCGGCCAACTTTCTGGTGGCGCCGTGCCGGGAC GGGGGCTGGCAGGTGCGCGTGACCGACTTTGGCGCGGGCGGGCTGGTGGAGCTGGGGCGGCTGGAAGACCTGGGCATCAC GCCGATGGGGATGACGATTGAGGAAGGCGGCTCGGGCAGTTCCAGCCTCGGTACGCCGCTTTATATCGCGCCCGAGATCA TCTCCGGGCAGGCGCCTTCGGCGCGGTGTGATGTCTATGCGCTGGGCGTGATGCTGTATCAGATCCTGGCCGGGGACATG AAGAAGCCGCTGGCAACGGGTTGGGACGCGGACATCGATGATCCGCTGTTGCGCGAGGATATTGCCGAGGCGACGCATGG CGATCCGTTGCAGCGGATTGCGTCTGCCGGGGAGCTGGCGGCGCGGCTGAGGGCGCTGGACGTGCGGCGGGAAGATCGCG CGCGGGCGCAGGCGCTGGCGGCAGACGCCGAGGCGGCGCGGGCGGAGCTGGAGCGGGTGAAGACGCGGCGGCCCTGGGTG GCGGCGACCTTTGCGGCGCTGGTGATCGGGTTTGGCGCGAGCGTGTGGCTGTACATGCAGGCGGAAGGCGCGCGGGGGCT GGCGGAGACGCAGGCGGCGCGGGCCGAGGCGACGGGCGGGTTCCTGCGCGACCTGCTGGTGAATGCTGACCCCTACCGGC CGGGCGGGGCGGGGGATGTGACGGTGCGCGCGGCGCTGGACAAGGCGGCGGCGGATATTGGCGCGCGGTTTGAAGATGAT CCGGCTACGGAAGCCTCGATCCAGCAGACGGCGGGCGAGATCTATTCGAGCCTGGCGGTATATGATGCGGCCGCCGAGCG GAAAGGGCGGGCGGCGGACCTGTTTGCGCGGCTGTATGGGGAAAGCGACCGGCGCACATTGCTGGCGCGGTATCTGCAGG CCGAAGCGCTGGCCAATGCGTCCCGGATTGCGGACGCCGGGGCGGTGCTGGACATGGCGGACAAGGCGGCGATGGGGCAG ACCGCTGGCGACGCGAAGCTGGCCTTTGCGGCGGCGCAGACGCGCGGGCGGTATTATCTCGTGCAGGCGAACATGGAGGA ATCCGCGCCGTTTCTGGAGGCGGCGGTGCGGCTTCTGCCGGAGGCGATGCCTGAAGATGTGGAGGCGGGCTATCGGCTGA AGATGGACCTTTCCCAGATTTACAGCCGCGTGGGCCGGCATGAAGACGCGATTGACCTGCTGGCGGGGTTGCAGGCGCCC TCCTACGCTGAAGCGGGGGTGAGCGAGGCGACGCGGGCGCGGGCGAGCATGTTTCTGGGGGCATCGCTGTTTTATGCGGG CAAGTATGATGAGGCTGAGCCGGTTCTGATAGAGTCCATCCGCCTGCTGACGGATGTGTTCGGAGAAGAAGCGGCGCAGG TGGTGGAGGCGCAGAGCGCGCTGGCCAATCTTTATGCGACATCGGGGAACTGGGCGCCGGCGTTGCCGCTGGTGGCGGAT GTGCGCGAGAAGATGTGCGCGCTGCACGGGGAGGACCATCTGACCTGCCTGATGACGATAGGAAATCAGGCGGTGTTCCA GTGGTTCATGGATGACGCGGAGGGGGCGATTGCCAACCTTGTGCCGGTGGTGGAGACGTTTCGCGCGCAGCTGGGGCCGG AGTCTCCGGCGGTGCATGTGATGGCGTATTATCTGGCGATGGCGAAGCTGGATGTGGGCGCGGCCGATGAAGCCCTGGCG TTGGCGAATACGCTGGACGCGGCCAAGCTGGCAGCGGGCAGCCCAGGCGATGGCTGGGCCGAGCGCGTGGCCGGGCTGAA GGGCATCGCGATGATCGATCAGGGGCAATGCGCGGCGGGGCTGGCGCTCCTGCGGCCTGCGGTCGAGGCGATGAAAGCCG GAGACATGCAGCCCTGGATTCTGGCGGATTATGAAGAGGCCGAGGCTGGGGCGCCCTGCCGCTGA
Upstream 100 bases:
>100_bases GGACGATTTCAAAAGCGAGGAACCCGCCCTCTACCGTTATCGCTTTGGCGCGGCGGAGTTTGACGAGGCGCGGTTTGACC TGAAGGTGGGCGGGCTGGTT
Downstream 100 bases:
>100_bases TTATCCGATGTCGGATATTCCCGTTTTTGCAAATTTCAGGATGGCGCCGGTGAGCCGGGCCAGGTCATCGTCGCTGATGC CGTAGGCGGGGGAGAGGTAG
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 874; Mature: 874
Protein sequence:
>874_residues MELERRPLEVLSLLLRHAGEVVTKEELLDTVWQGRITVENVLANAVAKLRKGLGEALAEHIRTQARIGYRFTGPVERIAV GRALVNRLDLRAGQPVPGRSHFMLKEQLSGTRGSEVWLARHDKTGELRVYKFSPDGARLASLKREATLARVLRESLGERD DIARVIDWNFETAPFFLECAYGGENLLAWSQGEGRLAAMSQGARLELALQAIDVVGAAHEAGVLHKDLKPANFLVAPCRD GGWQVRVTDFGAGGLVELGRLEDLGITPMGMTIEEGGSGSSSLGTPLYIAPEIISGQAPSARCDVYALGVMLYQILAGDM KKPLATGWDADIDDPLLREDIAEATHGDPLQRIASAGELAARLRALDVRREDRARAQALAADAEAARAELERVKTRRPWV AATFAALVIGFGASVWLYMQAEGARGLAETQAARAEATGGFLRDLLVNADPYRPGGAGDVTVRAALDKAAADIGARFEDD PATEASIQQTAGEIYSSLAVYDAAAERKGRAADLFARLYGESDRRTLLARYLQAEALANASRIADAGAVLDMADKAAMGQ TAGDAKLAFAAAQTRGRYYLVQANMEESAPFLEAAVRLLPEAMPEDVEAGYRLKMDLSQIYSRVGRHEDAIDLLAGLQAP SYAEAGVSEATRARASMFLGASLFYAGKYDEAEPVLIESIRLLTDVFGEEAAQVVEAQSALANLYATSGNWAPALPLVAD VREKMCALHGEDHLTCLMTIGNQAVFQWFMDDAEGAIANLVPVVETFRAQLGPESPAVHVMAYYLAMAKLDVGAADEALA LANTLDAAKLAAGSPGDGWAERVAGLKGIAMIDQGQCAAGLALLRPAVEAMKAGDMQPWILADYEEAEAGAPCR
Sequences:
>Translated_874_residues MELERRPLEVLSLLLRHAGEVVTKEELLDTVWQGRITVENVLANAVAKLRKGLGEALAEHIRTQARIGYRFTGPVERIAV GRALVNRLDLRAGQPVPGRSHFMLKEQLSGTRGSEVWLARHDKTGELRVYKFSPDGARLASLKREATLARVLRESLGERD DIARVIDWNFETAPFFLECAYGGENLLAWSQGEGRLAAMSQGARLELALQAIDVVGAAHEAGVLHKDLKPANFLVAPCRD GGWQVRVTDFGAGGLVELGRLEDLGITPMGMTIEEGGSGSSSLGTPLYIAPEIISGQAPSARCDVYALGVMLYQILAGDM KKPLATGWDADIDDPLLREDIAEATHGDPLQRIASAGELAARLRALDVRREDRARAQALAADAEAARAELERVKTRRPWV AATFAALVIGFGASVWLYMQAEGARGLAETQAARAEATGGFLRDLLVNADPYRPGGAGDVTVRAALDKAAADIGARFEDD PATEASIQQTAGEIYSSLAVYDAAAERKGRAADLFARLYGESDRRTLLARYLQAEALANASRIADAGAVLDMADKAAMGQ TAGDAKLAFAAAQTRGRYYLVQANMEESAPFLEAAVRLLPEAMPEDVEAGYRLKMDLSQIYSRVGRHEDAIDLLAGLQAP SYAEAGVSEATRARASMFLGASLFYAGKYDEAEPVLIESIRLLTDVFGEEAAQVVEAQSALANLYATSGNWAPALPLVAD VREKMCALHGEDHLTCLMTIGNQAVFQWFMDDAEGAIANLVPVVETFRAQLGPESPAVHVMAYYLAMAKLDVGAADEALA LANTLDAAKLAAGSPGDGWAERVAGLKGIAMIDQGQCAAGLALLRPAVEAMKAGDMQPWILADYEEAEAGAPCR >Mature_874_residues MELERRPLEVLSLLLRHAGEVVTKEELLDTVWQGRITVENVLANAVAKLRKGLGEALAEHIRTQARIGYRFTGPVERIAV GRALVNRLDLRAGQPVPGRSHFMLKEQLSGTRGSEVWLARHDKTGELRVYKFSPDGARLASLKREATLARVLRESLGERD DIARVIDWNFETAPFFLECAYGGENLLAWSQGEGRLAAMSQGARLELALQAIDVVGAAHEAGVLHKDLKPANFLVAPCRD GGWQVRVTDFGAGGLVELGRLEDLGITPMGMTIEEGGSGSSSLGTPLYIAPEIISGQAPSARCDVYALGVMLYQILAGDM KKPLATGWDADIDDPLLREDIAEATHGDPLQRIASAGELAARLRALDVRREDRARAQALAADAEAARAELERVKTRRPWV AATFAALVIGFGASVWLYMQAEGARGLAETQAARAEATGGFLRDLLVNADPYRPGGAGDVTVRAALDKAAADIGARFEDD PATEASIQQTAGEIYSSLAVYDAAAERKGRAADLFARLYGESDRRTLLARYLQAEALANASRIADAGAVLDMADKAAMGQ TAGDAKLAFAAAQTRGRYYLVQANMEESAPFLEAAVRLLPEAMPEDVEAGYRLKMDLSQIYSRVGRHEDAIDLLAGLQAP SYAEAGVSEATRARASMFLGASLFYAGKYDEAEPVLIESIRLLTDVFGEEAAQVVEAQSALANLYATSGNWAPALPLVAD VREKMCALHGEDHLTCLMTIGNQAVFQWFMDDAEGAIANLVPVVETFRAQLGPESPAVHVMAYYLAMAKLDVGAADEALA LANTLDAAKLAAGSPGDGWAERVAGLKGIAMIDQGQCAAGLALLRPAVEAMKAGDMQPWILADYEEAEAGAPCR
Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI14196445, Length=224, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=1e-12, Organism=Homo sapiens, GI134304838, Length=133, Percent_Identity=31.5789473684211, Blast_Score=73, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320698, Length=345, Percent_Identity=24.0579710144928, Blast_Score=77, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6324472, Length=149, Percent_Identity=30.2013422818792, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR002290 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 93563; Mature: 93563
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00108 PROTEIN_KINASE_ST ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELERRPLEVLSLLLRHAGEVVTKEELLDTVWQGRITVENVLANAVAKLRKGLGEALAEH CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRTQARIGYRFTGPVERIAVGRALVNRLDLRAGQPVPGRSHFMLKEQLSGTRGSEVWLAR HHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEEE HDKTGELRVYKFSPDGARLASLKREATLARVLRESLGERDDIARVIDWNFETAPFFLECA CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEE YGGENLLAWSQGEGRLAAMSQGARLELALQAIDVVGAAHEAGVLHKDLKPANFLVAPCRD CCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCC GGWQVRVTDFGAGGLVELGRLEDLGITPMGMTIEEGGSGSSSLGTPLYIAPEIISGQAPS CCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCHHHCCCCCC ARCDVYALGVMLYQILAGDMKKPLATGWDADIDDPLLREDIAEATHGDPLQRIASAGELA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH ARLRALDVRREDRARAQALAADAEAARAELERVKTRRPWVAATFAALVIGFGASVWLYMQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEE AEGARGLAETQAARAEATGGFLRDLLVNADPYRPGGAGDVTVRAALDKAAADIGARFEDD ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCC PATEASIQQTAGEIYSSLAVYDAAAERKGRAADLFARLYGESDRRTLLARYLQAEALANA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SRIADAGAVLDMADKAAMGQTAGDAKLAFAAAQTRGRYYLVQANMEESAPFLEAAVRLLP HHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH EAMPEDVEAGYRLKMDLSQIYSRVGRHEDAIDLLAGLQAPSYAEAGVSEATRARASMFLG HHCCCHHCCCCEEEECHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHH ASLFYAGKYDEAEPVLIESIRLLTDVFGEEAAQVVEAQSALANLYATSGNWAPALPLVAD HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH VREKMCALHGEDHLTCLMTIGNQAVFQWFMDDAEGAIANLVPVVETFRAQLGPESPAVHV HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHH MAYYLAMAKLDVGAADEALALANTLDAAKLAAGSPGDGWAERVAGLKGIAMIDQGQCAAG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCHHHH LALLRPAVEAMKAGDMQPWILADYEEAEAGAPCR HHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCC >Mature Secondary Structure MELERRPLEVLSLLLRHAGEVVTKEELLDTVWQGRITVENVLANAVAKLRKGLGEALAEH CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRTQARIGYRFTGPVERIAVGRALVNRLDLRAGQPVPGRSHFMLKEQLSGTRGSEVWLAR HHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEEE HDKTGELRVYKFSPDGARLASLKREATLARVLRESLGERDDIARVIDWNFETAPFFLECA CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEE YGGENLLAWSQGEGRLAAMSQGARLELALQAIDVVGAAHEAGVLHKDLKPANFLVAPCRD CCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCC GGWQVRVTDFGAGGLVELGRLEDLGITPMGMTIEEGGSGSSSLGTPLYIAPEIISGQAPS CCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCHHHCCCCCC ARCDVYALGVMLYQILAGDMKKPLATGWDADIDDPLLREDIAEATHGDPLQRIASAGELA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH ARLRALDVRREDRARAQALAADAEAARAELERVKTRRPWVAATFAALVIGFGASVWLYMQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEE AEGARGLAETQAARAEATGGFLRDLLVNADPYRPGGAGDVTVRAALDKAAADIGARFEDD ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCC PATEASIQQTAGEIYSSLAVYDAAAERKGRAADLFARLYGESDRRTLLARYLQAEALANA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SRIADAGAVLDMADKAAMGQTAGDAKLAFAAAQTRGRYYLVQANMEESAPFLEAAVRLLP HHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH EAMPEDVEAGYRLKMDLSQIYSRVGRHEDAIDLLAGLQAPSYAEAGVSEATRARASMFLG HHCCCHHCCCCEEEECHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHH ASLFYAGKYDEAEPVLIESIRLLTDVFGEEAAQVVEAQSALANLYATSGNWAPALPLVAD HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH VREKMCALHGEDHLTCLMTIGNQAVFQWFMDDAEGAIANLVPVVETFRAQLGPESPAVHV HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHH MAYYLAMAKLDVGAADEALALANTLDAAKLAAGSPGDGWAERVAGLKGIAMIDQGQCAAG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCHHHH LALLRPAVEAMKAGDMQPWILADYEEAEAGAPCR HHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA