Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114563702

GI number:

Start: 3033265

End: 3037095

Strand: Direct

Name: Not Available

Synonym: Sfri_2534

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563701

Following gene: 114563703

Centisome position: NA

GC content: NA

Gene sequence:

>3831_bases
ATGGACGCTATTACCGTGACACCGCTTAATGCCCTCACCTTACCGTTTAGCGGTTCCAGCTTAATTGAAGCCAGTGCTGG
TACAGGGAAAACCTATACTATTTCCGGTTTGTATTTACGTTTATTGTTAGGCCATGGTGGTAAAGCACCGTTAAGTTGTG
AGCAAATTTTGGTGGTAACCTTCACCAACGCCGCCACCGAAGAACTCAGAGACCGAATTCGTAAGCGGATTAACCTAGCG
TTTAAACGCTTTTTAGGCTTAGCCGTCAATGATGAGTTTATTGAACAGCTTTACCAAGACACATCGGAAGATGAACGGCC
TATTGCATTAAGACGCTTAGACTTAGCGTTAAAGTCGTTAGATGAAGCGGCTATTTTTACTATTCACGCCTTTTGCCAAC
GCGTATTGTCAGACATGGCATTTGAGTCGTCATTACTATTTGAGTCCGAATTTACCCTCGATGACAGTGAGTTTTTACAC
CATGCAGTGCGCGATTTCTGGCGTGAAGTCTGTTATCCCTTACCGCCCTTTTTAGCCCAAGCCATTAGTGATGTGTTTGC
CGAACCTGATGTGTTAGCACAAAAACTGCGACCGTTATTAGGTGCAAGCCAAGCGGTGTTGTCAAAGCAGCCTCTGGCCT
TTAAAACCTTACAACAACAGCTAAGCCAAAGTATCAGCCGCTTTACCTTATTGTGGCAAAGCCTGCACGACAGCACCCTT
GAATTATTGCAATCGCTACCATTAAACGGTCAACGTTTTGGTAAAGGCGCCGACGGCTACCCTAAACTTAGCCAACTGTT
TGATAGTATTAGTAACTGGGTGAAATTTGGCCAAGGATTACCGCCAATAAAAGCGCTGGAGCAATTGGCATTATCCGAGC
TTAAACTCAATAAAGGTGGCGTTATCCCCAGTGCGGATGAAGCGCCGTTACTTGATCATATTGAGCGCTTACTTGAGTTA
ATTAATCAGCTTATTCCGTCATTTTTAGTGCGCGCCCGAGAGGGAATTCGCCAACGCTTTGCTGGCCAAAAACAGCAACG
CAATTTAATGACACCCGATGACCTATTGCTCAGTTTAGCCATGGCGCTCAGCCAAAACCCAATCACCCTAGCCCATGCCA
TTGCTAAGCGTTTTCCGGTCGCATTAATTGATGAGTTCCAAGACACCGATCCACTACAATTCACCATTTTTAATCAGGTG
TATCAACAGCCGTTAGCATCACAACTGGACCTAACCGCAGATGCAAGGGTGAATAGCCCAGATGATGACAGTAAAAGTAA
TGATGATAATGGTAATGACAACATTGGTAATGACGCTAACAAGGGGCGCTTAAGTTTATTAATGATTGGCGATCCTAAGC
AGGCTATTTATGCTTTCCGTGGTGCCGATATTTACACTTATATTGCCGCGCGCCAACAAACACAGGCTCATTATAATCTT
GACACCAATTACCGCTCATCGACTCAATTAGTCAATGGCGTTAATCAGCTATTTAGCCAACATCAAGATCCGTTTATTAG
CCAAGCTATCCCCTATGATATTGTTAAAACCCCATCATCGGCAGCCAATAAACACCTAAGTGAAGCGACAACAAATCCTA
CAGCGTTGCGGATCCGCTTATTAGCCGAAGACGATGTTAATGGCCTCAATAAAACTACCGCAAGACAACGCTTAGCCGCT
GATGCTGCCAGTGAAATAAAGCGCTTACTCACCGAAGCGCAACAAGGATTATGTAAAGTTAATAACAGCATTGAACAGGA
AGCTAAACCGCTCATTGCCAAAGACATTGCCATATTGGTGCGCGACCGTAACGAAGCGGCCGTGATGAAAGCGGAATTAT
CAGCACGTAAAATTGGCGCGGTATTTTTAAGCCGAGACAGTGTATTTAACACCATTGAAGCCCGTGAAATGGCTATTTTA
TTGTATGCCTTAGCCACGCCTAAAGATGAACGTGCTATCCGCGCCGCACTGGCCACTGAGCTTGTCGGCTTTAATGCCCA
GCGGATCCATCAATTTAACCAAGATGAAGAACAGCGTCAGCAGGTATTAGATCAATTCACTCATTGGCATCAGTTATGGC
AACAACGCGGCGTTATGCCTGCGCTGCTTAACTTTGCCAGCGAAACCAAACTGATCCATCGTTATCTGTCGCAATCTGTC
ACGGCTGACATCAATAATGACAGTACTTATAGCAGCAATAATGACAACAATAGTGACAATAGCTTTAATGATGCTGATGA
CGACAACGCAGCAGATCTTAAAGCCTCAGGTGAAAGACGCTTAACCGACTTTAGGCATTTAGCCGAATTACTGCAGCAAA
AGGCCACTGAGCTAGATGGTAGCAGCGCCCTAATCAATTGGTACGAGCAACAACTGATTGGTAACAATGGTGGTGATGAG
CAGCAACTGCGCTTAGAAAGCGAACAGAACTTGGTGCAAATTGTCACTATTCATAAAAGTAAGGGCTTAGAATATCCGGT
CTGTTTTGTGCCGTTTGTCAGCTTAGCCCGTGGTAATAAAAAACGCCCTGCGCCAATGATGTACCATAAAAATGAGCAGC
TCATATGGGATATCGACGCCACCGACGAAGGCTGGGAACAACTTAAACAAGAAACCCTCGCTGAAGATTTACGCCTACTG
TATGTGGCGTTAACACGGCCGGTTTACGTGTGTTATTTGTATATTGCTAACCAAAGCCGTCAATTAAAGGCGGGGATCAG
CAGCCAATTACATGAAACAGGTATTGGTTATCTGTTGGGCATTACCGACAAGAAAACTGACTTTGCTCTTATTCAAGCCA
AAGTGAATGCAATTGCCACCTTACCAGCGATGAGTGTGGAATGCTTAGGCAACGATATTGACGATTCAGTGCTCGCCGAT
ATCCACGACAATAATGACCCGCTAGTGGCCAAAAAAGTCACTCGAGTACAAAGCCTTGCTTGGCGAGTGGGCAGTTATTC
TGGCTTGGTAAAACATCTTCCTCACGAGAGAGTCGCGCCCGGTGCCGACGATGAAGACTTCACCGATGAGTTAATCCAAT
TACAGTTACAAGATGAACTCACCAGCGAACCCGAACTTGATCGTTTTACCTTTGAACGTGGCGCCAATGCCGGTAGTTTT
ATGCATTTAGTGTTAGAACTGTTTGATTTTACCCAGGCAAACACCGAGCTGACACCTGCGCTAACGAAAGCCATGAAACA
ATATGGGTTTGACGAAGCCCTATGGCAACAGCCGCTAATGACGTGGTATCAGCAAATATTGGTCGCACCGCTGTTTATTG
AGCCATCGTCAGAGGACACATCACTGACATTAAGCCAATTAGGCATGAAGCAAAAAATGGTCGAAATGGAGTTTTACTTG
CCTATTTCAACCTTACAAGCATCGCAATTAAATCATATTTTGCAACAGCACGGTTATGTCGCTGGACTCGACTTTGATAC
TTTAAAAGGCATGTTAAAAGGCTTTATCGATTTAACCTTTGAGCACAAAGGCCAATTTTATATTGCCGATTATAAGTCCA
ACCATTTGGGCGATAACTATAGCGACTACACTCACTCAGCCATGGCTAAAGCCATTGATGCTCATCGTTATAATTTGCAA
TACATCTTGTATACCTTGGCGTTGCATCGTTACTTATCGCTTAGATTACCAAACTACAATTATCAGCAACATATTGGCGG
CTGCTATTACCTGTTTTTACGCGGCATGCATCCTGAGCATCCTGGCGCAGGGGTGTTTTATGACAAACCACCGCAAGCGT
TAATCGAACAACTCGACCGTTTATTTACAGGTAATACAGACAATCGTGCGCCGGAGACGTCATCATGCTAA

Upstream 100 bases:

>100_bases
ACAAAGATAAATTGGCAGAATTAGACACTTTTGTCAGTGGCACCGCGGTCGATATTCAAGCGCAACTCATCGCCAACGCA
GCTAAACTAGGAGCGCATTA

Downstream 100 bases:

>100_bases
TACTCACCCATCCAATCACTGAGTTATTGCACCTTTGGCAAGAACAGCGGCTCATTACCGCACTCGATCGTCATTTTGCT
ATAGAGCTGGCCAGTATTGA

Product: exodeoxyribonuclease V, beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1276_residues
MDAITVTPLNALTLPFSGSSLIEASAGTGKTYTISGLYLRLLLGHGGKAPLSCEQILVVTFTNAATEELRDRIRKRINLA
FKRFLGLAVNDEFIEQLYQDTSEDERPIALRRLDLALKSLDEAAIFTIHAFCQRVLSDMAFESSLLFESEFTLDDSEFLH
HAVRDFWREVCYPLPPFLAQAISDVFAEPDVLAQKLRPLLGASQAVLSKQPLAFKTLQQQLSQSISRFTLLWQSLHDSTL
ELLQSLPLNGQRFGKGADGYPKLSQLFDSISNWVKFGQGLPPIKALEQLALSELKLNKGGVIPSADEAPLLDHIERLLEL
INQLIPSFLVRAREGIRQRFAGQKQQRNLMTPDDLLLSLAMALSQNPITLAHAIAKRFPVALIDEFQDTDPLQFTIFNQV
YQQPLASQLDLTADARVNSPDDDSKSNDDNGNDNIGNDANKGRLSLLMIGDPKQAIYAFRGADIYTYIAARQQTQAHYNL
DTNYRSSTQLVNGVNQLFSQHQDPFISQAIPYDIVKTPSSAANKHLSEATTNPTALRIRLLAEDDVNGLNKTTARQRLAA
DAASEIKRLLTEAQQGLCKVNNSIEQEAKPLIAKDIAILVRDRNEAAVMKAELSARKIGAVFLSRDSVFNTIEAREMAIL
LYALATPKDERAIRAALATELVGFNAQRIHQFNQDEEQRQQVLDQFTHWHQLWQQRGVMPALLNFASETKLIHRYLSQSV
TADINNDSTYSSNNDNNSDNSFNDADDDNAADLKASGERRLTDFRHLAELLQQKATELDGSSALINWYEQQLIGNNGGDE
QQLRLESEQNLVQIVTIHKSKGLEYPVCFVPFVSLARGNKKRPAPMMYHKNEQLIWDIDATDEGWEQLKQETLAEDLRLL
YVALTRPVYVCYLYIANQSRQLKAGISSQLHETGIGYLLGITDKKTDFALIQAKVNAIATLPAMSVECLGNDIDDSVLAD
IHDNNDPLVAKKVTRVQSLAWRVGSYSGLVKHLPHERVAPGADDEDFTDELIQLQLQDELTSEPELDRFTFERGANAGSF
MHLVLELFDFTQANTELTPALTKAMKQYGFDEALWQQPLMTWYQQILVAPLFIEPSSEDTSLTLSQLGMKQKMVEMEFYL
PISTLQASQLNHILQQHGYVAGLDFDTLKGMLKGFIDLTFEHKGQFYIADYKSNHLGDNYSDYTHSAMAKAIDAHRYNLQ
YILYTLALHRYLSLRLPNYNYQQHIGGCYYLFLRGMHPEHPGAGVFYDKPPQALIEQLDRLFTGNTDNRAPETSSC

Sequences:
NA

Specific function: NA

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA