Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563701

GI number:

Start: 3029453

End: 3033265

Strand: Direct

Name: Not Available

Synonym: Sfri_2533

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563700

Following gene: 114563702

Centisome position: NA

GC content: NA

Gene sequence:

>3813_bases
ATGCTTACTTTAATTCAATCTAATCAGATGGAAGTGTTATCTGAACAACTGGCCAAACTGTTGGCTATTCGTTTAGATAA
CGTCAGTTTATTAGCCAGTGAGCATGTGTTAGTTCAAAGCCCCGGGATGTCGACTTGGCTGCGTTTAGAAATCGCTAAAC
ACAATGGTATCGCCGCCGCATTATCGTTCCCGTTACCCTCGAGTTTTACTTGGCAGTTATGCCACGACTTGCTGCCCGAT
GTACCAAAAGATAACGCCTTTACTAAAGCGGCGATGACCTGGAAGTTAATGGACTTATTACCAAGTCTGCTAGATAACCC
AGATTTTAGCCCACTCAAACAGTACTTATCGCCTCAAGTTGATACCACAACTGATATTGCTGCTACAGATATTCTTGATA
CCGATGTAGACGCGAATACTAATACTGATATTGAAACTGAAACTAATATTCATACAGCAAACAGCCACGCCATATCGCAG
CTTAATCAGTCACATGATGCGATTAAACTATTTCAGTTGTGTGGCCGCATTGCCGACATTTTTGACCAATACTTAGTCTA
TCGCCCTGAGTGGATTTTAGCGTGGGAGCAAAACCAGCCGTTATCAAGCATCGACAACCGCCTAGCATTAGATGAAAACC
AGCAATGGCAACCGATCCTGTGGCGAACATTAATCGACTATAATCAACATCATTTGCACGCCAGCCATTATCATCGCGCC
AATTTACATGCCGATTTAATTGCAACCTTGGCCAATCCAGATACCGATTTATCGATGTTGCCCGCTCGATTATACGTGTT
TGGTATTTCGTCCATGCCCCCACAAACCCTCGATGTGCTGTACCATTTAGCCAGTCGTATCGATTTGATAATGTTGTCTC
TCAGCCCTTGCCAGCATTATTGGGGCGATATTATTGAGCCGAAAACTCGTGCCCGCATGGCACTGCAATATGCCAACAAA
AAACAACTCGACCAAGACTGGGAAGACAAGCTAGAAGTAGGTAACCCTATATTGGCCAATAATGGTCAAATGGGCCGCGA
ACTGCTGGATTTATTACTGTCTCTGCCGCCAGAACACACCGATTTTGGTTACGACTGTTATGTTGAGCCCGAGCCGAATA
ATCTGCTGCACGGGGTGCAATACGATATCTTACAAATGGAAACACTCGGTCAGCCATTAGGGCCAAACTCTAGTGTGTAC
CAAGACATTCATGCTCGCCGCACCTTATTACCAAGTGATGACTCAATTACCTTACGCAGTTGCCACAGTGCCCTGCGCGA
AGTTGAAACCTTACATGATCACCTTTTAGAGCTGTTATCAAACAACAGCGACTTAAGCCCTAAAGACATCGTGATCATGA
TGCCCGATGTCGCAGCGTATGCTCCGTATATTGATGCGGTATTTGGCACCGCCAACAGTCAATACTTTGCCGACAAAAAT
CCGCAAAAAGGCGATTACTACATTCCCTACGCCATTGCCGACAGGGGCGCAGCGCAAGAGTCGCCGCTGATTAATAGTTT
TTTAAGCCTGTTAAATATCAATCAAAGTCGCTTTGGGCTTACTGATATTATCGGTATTTTAGAAGTGCCTGCTATTTTGC
GTCGCTTCCAACTCGATGATGACGAATTGTCATTAATCCGCCGCTGGCTAGACGATGCGAATGTCCGTTGGGGCCGCAGT
GAACAAACTCGCAGCCAACTAGGCGTGCAGCCTTTTACGCAAAATTCATGGGCATTTGGCATTAAGCGTTTAATACTGGG
CTACGCCTTTAACGACGATGCCGATATTTATCGCGAAACCTTGATGGTACAAGGCATTGAAGGTCAGTCATCACAAGCAT
TAGGTAAGTTGCTCAACTTTTTAGAAACCATCGACACCTATTTCAACTTATTTGCCAATGACTACAGCACCGCAGAGCGC
CTTGAACAATTACAACAGCTACTCGCCGATTGCTACGACACCACTGATGACGAGCGTGAACAAATTCAAGCCATTCGAGA
TGCATTGGTCACCCTAGACACTGAGCTTGAAAGTGCCGGTCATCAAGGCCAAGTTGATATTGAAGTCCTAAAGCAGTGGT
TTAATCAGCGCTTAACTGAATCTCGGGTTGGCCAGCGTTACCTTGCTGGTAGCGTGAATTTTTGTACCTTAATGCCAATG
CGCTCAATCCCCTTTAAAGTGGTGTGCTTGCTGGGAATGAATGACGGCGTCTATCCGCGGGTACAACATCCTGTCGGGTT
TGATTTAATGGCGCATTTTGGCCCTAAAAAAGGCGACCGCTCGCGCCGATTAGACGACCGCTACCTATTTTTAGAAGCAT
TACTGTCGGCCAGAGAGCAGCTTTACATCAGTTATATTGGCCACAGTGAGCGCGATAATGCTGAGCGCATTGCCTCAATG
CTAGTGTCAGAATTGGTCGAGTATTGCCAACTCAGCTACCTACCGCAATCCTTACAGCAACAGCTTGAACAACAAGCCGA
AATCAACCTTGATGATGCCGATAAAGCCGTACTGGCACAGCTGATTCAAGCACAACCTTTGCAGCCTTTTGACGCTAAAC
TTTTCCGAGAAACACCACTATCTGCGCATAGTGTGAATAAGCTGCAACATAGCTTTAATGCCCAATGGTGCCCGCCACCA
GCCAATGCGACCATTAACAATCACATTTTTTTTGAGCAAGCATTACCTTTGTCGGCCGAACAGGCAGATGAAGTGTTTGC
CCATACTCATATTAATAGCGAAGGCATTAAAGTGGTCGAACTCGAATTGTCGGCATTAATCCGTTTTTATCGTAATCCAG
CGCAATTCTTTTTCAACCGCAGTTTAAAAGTCGATTTATCACTGGATATTCAAGCCGATGACAATGACGAACCGTTTAGC
TTAAATGCACTCGAACGTTACTTATTGCAATCACGCATGCTCGACAATGCCATTGAACATCAACTCGACAGCCCAGATTT
CGAATTACTCAGCAAACTCAAAACCAGCGGTGAATTGCCCATGGCGCCGTTCGACGACTTGTTAATTAATCAATATTTAC
GCGATATATCGCCGTTGATTAATCGGGTGCAGTTTTTACAAGATCAACAAGCCATGCACACGCTGAATGTGGATCTTAAC
TTTGATCTACCGATGCAGGATTTTCCAGCGTATGCTCTATCTGTGCAGGGTTTACCAGAACAAGCAGATACAACCCATTC
GTCCATCGTGCGAGTCAATCTTGTCGGCCGTATTGACGACATTCTGCCTAAAGGCTTAGTCAATTACCGCCCCGGCACTG
CCCACGGACGAGATTTTATTCGGGTGTATTTACGTCATTTATGCATCAACGCCATGGCCAATTCGTCCACCTCAGGCATG
GGTAAAAATCAATTCAGTTACTTACTCGACATTGGCCATTTTCATGCCTTTGCGCCTATTACTGCTGAACAAGCACAGGC
ACAACTCATGCGCTTTATCAGTGGTTTTATTCAGGGGCAAACTCAACCCTTGTGCTTTATGCCTAAAACGGCTTTCGCCT
ATGTTGAAACCGATGGCGACCATGAAGAAAAGCTGCTTAAAGCCCAGCAAAAATGGGATGATGGCCAAAACCAGTTCGGC
GAAGGACACGACCCACATAACCAGCGTTTATTCCATTTCCCAGAAGACTTTAGCGAAGCTAGGTTTGGTGCATTAGCCAT
CCATTTGCTGCAACCCATGTTAAGCCAGTATCACAAAGATAAATTGGCAGAATTAGACACTTTTGTCAGTGGCACCGCGG
TCGATATTCAAGCGCAACTCATCGCCAACGCAGCTAAACTAGGAGCGCATTAA

Upstream 100 bases:

>100_bases
TGTGCACAACATCAGCAATCATCCTGATTATTAACGGTTTTGATTGATGATTTAAGGCAGAGTCCATAGAATGAATTAAT
CTCAAATTAGCGGGTCGCCC

Downstream 100 bases:

>100_bases
TGGACGCTATTACCGTGACACCGCTTAATGCCCTCACCTTACCGTTTAGCGGTTCCAGCTTAATTGAAGCCAGTGCTGGT
ACAGGGAAAACCTATACTAT

Product: exodeoxyribonuclease V, gamma subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1270_residues
MLTLIQSNQMEVLSEQLAKLLAIRLDNVSLLASEHVLVQSPGMSTWLRLEIAKHNGIAAALSFPLPSSFTWQLCHDLLPD
VPKDNAFTKAAMTWKLMDLLPSLLDNPDFSPLKQYLSPQVDTTTDIAATDILDTDVDANTNTDIETETNIHTANSHAISQ
LNQSHDAIKLFQLCGRIADIFDQYLVYRPEWILAWEQNQPLSSIDNRLALDENQQWQPILWRTLIDYNQHHLHASHYHRA
NLHADLIATLANPDTDLSMLPARLYVFGISSMPPQTLDVLYHLASRIDLIMLSLSPCQHYWGDIIEPKTRARMALQYANK
KQLDQDWEDKLEVGNPILANNGQMGRELLDLLLSLPPEHTDFGYDCYVEPEPNNLLHGVQYDILQMETLGQPLGPNSSVY
QDIHARRTLLPSDDSITLRSCHSALREVETLHDHLLELLSNNSDLSPKDIVIMMPDVAAYAPYIDAVFGTANSQYFADKN
PQKGDYYIPYAIADRGAAQESPLINSFLSLLNINQSRFGLTDIIGILEVPAILRRFQLDDDELSLIRRWLDDANVRWGRS
EQTRSQLGVQPFTQNSWAFGIKRLILGYAFNDDADIYRETLMVQGIEGQSSQALGKLLNFLETIDTYFNLFANDYSTAER
LEQLQQLLADCYDTTDDEREQIQAIRDALVTLDTELESAGHQGQVDIEVLKQWFNQRLTESRVGQRYLAGSVNFCTLMPM
RSIPFKVVCLLGMNDGVYPRVQHPVGFDLMAHFGPKKGDRSRRLDDRYLFLEALLSAREQLYISYIGHSERDNAERIASM
LVSELVEYCQLSYLPQSLQQQLEQQAEINLDDADKAVLAQLIQAQPLQPFDAKLFRETPLSAHSVNKLQHSFNAQWCPPP
ANATINNHIFFEQALPLSAEQADEVFAHTHINSEGIKVVELELSALIRFYRNPAQFFFNRSLKVDLSLDIQADDNDEPFS
LNALERYLLQSRMLDNAIEHQLDSPDFELLSKLKTSGELPMAPFDDLLINQYLRDISPLINRVQFLQDQQAMHTLNVDLN
FDLPMQDFPAYALSVQGLPEQADTTHSSIVRVNLVGRIDDILPKGLVNYRPGTAHGRDFIRVYLRHLCINAMANSSTSGM
GKNQFSYLLDIGHFHAFAPITAEQAQAQLMRFISGFIQGQTQPLCFMPKTAFAYVETDGDHEEKLLKAQQKWDDGQNQFG
EGHDPHNQRLFHFPEDFSEARFGALAIHLLQPMLSQYHKDKLAELDTFVSGTAVDIQAQLIANAAKLGAH

Sequences:
NA

Specific function: NA

COG id: COG1330

COG function: function code L; Exonuclease V gamma subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA