Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562721

GI number:

Start: 1838889

End: 1840994

Strand: Reverse

Name: Not Available

Synonym: Sfri_1545

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562726

Following gene: 114562719

Centisome position: NA

GC content: NA

Gene sequence:

>2106_bases
TTGCTCATCAATTGTTACCCAATACAATTTTTTGCCAATGTGCAATTTGTATTAGGTAACACGGTGACTGTCATTGCTGC
GGTTTTATTGGGACCTTGGTATGCATTTCTAACCGCTATGATGGCATCAACTGGATTAATGTTGATATGGGATAGCCCAC
ATGTGTATTTGTTTTTTGGGCTTGAAGCATTATTTTTAGGTTATGCCAGACGCCGTGATATCTATGCTTTATATGCTGAT
GCAGCATATTGGTTATTTATTGGTGCACCAATGGTATATTTATATGTGGTGCTATTGATGGACATTCCCCCCTCTCACTT
AGGCTTTATTATTTCAAAGCAAGGCATCAACGGACTGATTTATACCAGTATTGCATCACTACTGATTTTAGCGATACCAA
AGTTATGGTTTTTAAAAGACAAAGTTAAAGACCGCCATCGTAGACAATTAAGTTCACAACTGACCTATTTCTTCACCTTA
ATGGTGACCTTAACGTTATTGTTTTCGGCGTTAATCTTTAATTTTTATTTTTTAGAACGTCAACAAATCATGTTAAAACA
AAACATGACTGAAGCGGTTGCCCACCTTTCGACCTCAGCACAGAATTACATTGAAAACCATAAAACCGTCATTCAAAATA
CTGCAAGCCAATTAGACTTAGTTGCAGATACGCCTGAAAAATGGCAAGACATTTTATCGAGTTCACATCAAAACTATTCT
GGTTTTATCAGCATGTTGATTGCTAATCCGACAGCCAATATTGTCGCTGCTAGTCCAGTATCAAGACTCATGACAAAGCA
AATATCTGAACAAAGCGTCAACATTAAAGACAGAGATTATTTTATTGAGTCATTCTATAATCAGCGCCTATTCGTATCAT
CTGTCTTTCTCGGTCGCGGATTTGGAAATGACGCAATTATTGCTATGAGTGCGCCCTTTTATCTCGATGAGCAACACACA
CAAGTTGCAGGAATCGTAGAAGGGTCACTTGATCTGACCCACTTTGCACATATTGACCAAGTTAATGAATATACCGACGA
TGAATCTATAGTGATGGTTGATGAACAAAATCAAATAATTTACGCATCAACAAAACTCAACTTGAAACCACTCTCACAAT
TTAATTTTGCAATAAATAAAGGCGTATATCGAGCCAATCTTGAATTAATCAATATTCATAATACGACCTCAATTGTGCCT
GAATACATGTATGCTCACCGGGAACTCGATAATGGTTGGACCGTGTATATTTTAAAAGAATTTTCGCCGTTACTAAAACT
CGCTGAAGAACAAATGTTCAGTAGCTTTATCATGCTGTTGATTGCATTGTTGTGTACCTTCTATATTTCAAAGAAGCTCA
GCGCGTTGCTAACGGTGCCATTAGAAGCTGTCGCCAATCAATTCAGTCAGTCATATTCAGATCCAGCAAAAACATCGGCA
ATTGACGATAGCTCACCAAGAGAGGTATTCAGTCTGTACCAACGGTTAGCAGCCAGTAAACAACAACTCATCGCGCATCA
AGTCGAATTAGAAGAAACAGTTGCTCATCGTACGGCGGAATTAGAAAAGGCCAACAAAAAACTCACAGAACTGGTTGATA
GAGATCCGTTAACCGGCTTATATAATCGCCGTTATGCTGAACGTAAATTTGGTGAGTTAGTGGATTTTTGTTTGCGAAGC
GATCAGGCCATTACTGTTGTATTGCTTGATTTAGACTTCTTCAAAAAAGTGAATGACAACTATGGCCATTTAGCTGGTGA
TGAGTGCTTACGCAACGTGTCACAATTATTACAGAAATACTTTAAACGAGACATTGATATTGTGGCCCGCTACGGCGGAG
AAGAGTTTTTGCTTATTCTGCCTTTGTCCAATACCTTACATATTGAACATCATCTCAATGGTTTTAGAGAGGCACTGTCG
CAATTAGACATCATATCACCTGAAGATAAACAGTCATTTAACGTGACGGTCAGTATTGGTGCTATTACGGCAAGTGCTGA
TTATGAAGTAGAACTGGATAAATGGATTAAAGTCGCTGATGATAACCTCTATCAGGCAAAGCAACAGGGACGTAATCGAA
CAATCATTAACATCATTAATGACTAA

Upstream 100 bases:

>100_bases
AAATCTTTTTAGAATACAAATAATAAGGATATTTTTTTTGACCTTGCCACGCATTAATCAACAACATCTTTTATTCTCGA
TCATCTTGGGAGTCGTTGGA

Downstream 100 bases:

>100_bases
TATTTAGCGGTTTATTGCCTAATGGTGACTCAGGTTGATACCCTTGAGTAAACTCATCAATTCGAGTCATCATGTAAGGA
TAAAATGGATTCCATTTCTG

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>701_residues
MLINCYPIQFFANVQFVLGNTVTVIAAVLLGPWYAFLTAMMASTGLMLIWDSPHVYLFFGLEALFLGYARRRDIYALYAD
AAYWLFIGAPMVYLYVVLLMDIPPSHLGFIISKQGINGLIYTSIASLLILAIPKLWFLKDKVKDRHRRQLSSQLTYFFTL
MVTLTLLFSALIFNFYFLERQQIMLKQNMTEAVAHLSTSAQNYIENHKTVIQNTASQLDLVADTPEKWQDILSSSHQNYS
GFISMLIANPTANIVAASPVSRLMTKQISEQSVNIKDRDYFIESFYNQRLFVSSVFLGRGFGNDAIIAMSAPFYLDEQHT
QVAGIVEGSLDLTHFAHIDQVNEYTDDESIVMVDEQNQIIYASTKLNLKPLSQFNFAINKGVYRANLELINIHNTTSIVP
EYMYAHRELDNGWTVYILKEFSPLLKLAEEQMFSSFIMLLIALLCTFYISKKLSALLTVPLEAVANQFSQSYSDPAKTSA
IDDSSPREVFSLYQRLAASKQQLIAHQVELEETVAHRTAELEKANKKLTELVDRDPLTGLYNRRYAERKFGELVDFCLRS
DQAITVVLLDLDFFKKVNDNYGHLAGDECLRNVSQLLQKYFKRDIDIVARYGGEEFLLILPLSNTLHIEHHLNGFREALS
QLDIISPEDKQSFNVTVSIGAITASADYEVELDKWIKVADDNLYQAKQQGRNRTIINIIND

Sequences:
NA

Specific function: NA

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA