Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114562397

GI number:

Start: 1431202

End: 1437159

Strand: Reverse

Name: Not Available

Synonym: Sfri_1219

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562398

Following gene: 114562396

Centisome position: NA

GC content: NA

Gene sequence:

>5958_bases
TTGAGTTCTCAAGCCACCCCTAAAATAGCCATTGTCGGTTTAGCCAATCAGTATCCCGACGCGGATACTCCCGCTAAATT
TTGGCAAAACTTATTAGACAAAAAAGATTCACGCAGCCAAATCAGTGCGAGCAAACTCAATGCTTCACCGAGTGATTACT
TGGGTGTACAAGGCGAATCGGACCGTTTTTATTGTGATAAAGGCGGCTACATTCAAGACTTTCAATTTAACCCTCAAGGG
TATCGTATTGAGCCCGACGCATTTACAGGTTTGGATGACAGTTTCTTGTGGGCAACCGACACAGCCCGAAATGCGTTAAC
CGACGCGGGTATAGACCTTAGCAATAACGTGCTGCAACGCACCGGCATTGTCATGGGCACTTTATCGTTCCCTACAGCCA
AGTCTAACGAGTTATTTGTACCGCTCTATCACAGCGCGGTCGAAAAAGCCTTACAGATTAAACTCCAGCAGCCAAACTTT
AATCTGCAATCGTTTAATCAAGCATCGCAAAACAATACCGCAGAAAATGCCAATAACAATAATAATGTAGCGCCTAAAAC
GGTTAACTTACGTAATGGTGCCATTGCCCATAACGCCTCTAAAATTGTTGCCGATGCTTTGGGATTAGGTGGTACGCAGC
TAAGTTTAGATGCCGCCTGTGCAAGTTCGGTTTACGCATTAAAATTGGCCTGCGACTACTTGCATACCGGCAAATCAGAC
ATGATGCTGGCTGGCGCGGTGTCGGGAGCCGATCCGTTTTTTATCAATATGGGCTTTTCGATATTTCATGCTTACCCAGA
CCACGGTATTTCCGCCCCATTTGATAGTAACAGTAAAGGTTTGTTCGCTGGTGAAGGTGCAGGGGTATTAGTGCTCAAAC
GCCTTGAAGATGCCGAGCGTGATGGCGACCATATTTACGCTTTGGTCAGTGGCATTGGCTTGTCGAACGATGGTAAAGGC
CAGTTTGTGTTAAGCCCAAACAGCAAAGGCCAAGTGCAAGCATTCGAGCGCGCTTATCGTGATGCCGCCGCAATCGACCC
AGGCATAACCCCTGCCAGCATTGAAGTGATTGAATGTCATGCTACGGGGACACCATTAGGCGACAAAGTTGAATTAACCT
CGATGGAACGTTTTTTTGAAGATAAACTTCAAGGTAGCGCCACGCCATTAATTGGTTCCGCAAAATCCAATTTAGGCCAT
TTACTCACCGCAGCAGGCATGCCTGGGATCATGAAAATGATTTTTGCGATGCGTGAAGGCGTGTTGCCACCGAGTATTAA
TATCAGTGCCCCTATCGCCTCACCTAATGGCTTATTTGGTCAAGCGACTTTGCCAAATGATGTGCTGCCGTGGCCCGATA
AGGTCGGCAATAAAGCCCGCCATGCTGGCGTATCAGTATTTGGTTTTGGCGGTTGTAACGCCCATTTATTACTTGAGTCG
TATCAAGCTAAAGCCGTTACTGACAAGACGCTGAACAATCATTCTCAAAATAATAATTCTCTAAGTAATAACGCTCTGAA
CAATAACATTCAAACTCGCAGCACAGCGCTAGTTGATGCAGAAACGCCAATGCACATTACCGGCATGGCGGCGCATTTTG
GTCAATGTAGCAGTATTGATGCACTGGCGAGTAAAATCATCGCCAAACAAGCCATCTTTAGCCCGCTACCCACTCAGCGC
TGGAAAGGCTTAGACAAACATCCTGAACTATTAGCCCAATATGGCATCACAGATGTACCACAAGGCGCGTATATCGATCA
GTTCGATTTTGATTTCTTGCGCTTTAAAGTGCCACCCAATGAAGATGATCGCTTAATATCGCAACAACTACTGTTGATTA
AAGTCGCCGATGAAGCTATCGCCGATGCCAAGCTAACACCAGGCAGTAAAGTCGCGGTATTAGTCGCCATGGAAACCGAA
CTCGAACTTCATCAATTCCGCGGTCGAGTTAACTTACATAGCCAAATAGCTCAAAGCCTTAACGCTCAAGGTATTCAATT
ATCTACAGCGGAATATGACAGCCTTGAAACCATTGCGATGGACAGTGTCCTCGACGCCGCTAAGCTTAACCAATACACCA
GTTTTATTGGCAATATTATGGCATCGCGGATAGCCTCACTATGGGATTTCAACGGCCCAGCATTTACGATTTCTGCGGGC
GAACAGTCAGTTAACCGCTGTATAGATGTGGCGCAAAACCTGTTTGCGTTAGGGTCGTTACAAGAACCATTAGATGCCAT
CATTATTGCCGCTGTAGACCTGTCTGGCAGCATTGAAAATATGTTGTTCAATACCGCAAAGCTTAACGCCAAAGGATTGC
GTTCAACCGATTGGCTAGTGGGTGAAGGGGCTGGCGCGCTAGTGCTGCAACAAACCAGTGCTGTACACTCTCAGCTTGAT
AGTTACGCCAGTATCGACAGCGTTAACTTTACGCCATTGTCACAATTACCAACACAACTGCCAACACAATTACCAACTGA
GTTATCGGCAGACATTGTTGAGTTAAACCAATCGCCGGAATGCATATTAACAACTCAAGGTCGACAGTTTACCCAAAGAT
TAACTGATGCAGCTACAGCGGTCAGCTCAGCACCGTTATTGAGTAAAGCCCATGATATTCTCGGTCATACATTTGCCGCT
TCAGGCATGGCCAGTTTGCTGCACGGTTTAGTGCAAACTCGTCACATCGACAAACCGTCTATCAATGCCAGTGTATTCAC
CAGTAGCGACAATCAATACTCACAAGTTAATCTGTCGGTTTCTGCGGCGCAACAACACGCATTGCACGCTCGACTGGGCA
ATAATTTAACTCAACAACTGGCCACGGGCAGTAAGTTAAGTTTAATTAAACAAGTCAGTTTAGGTGGTCGCGATATTTAC
CAACACATTATCGACAGCCCACTTGATACCCTCGACAGTATTATTAATCAATGTGCTGATATTGCCCCTACTGTGGTCAG
TTCCACTGAAAGTAAGCAACCAACTATTGGTGATAATAGCCCTCTTAGCGTCAATAATAGCGAGAATATCGCCGAGCCTC
TTATGTCAGAAAATATGCCAAATAAAACGATTCCAAAGCAACCAAGGGTTGCCAGTATGACAAATCATACGATTCCACCA
GCACATTTAACGGCATTCCAACAAAATCAGTGGTTAGCACAACAAGCGCATTTAGCTTATTTAGCCAGCCGTGATGCAGG
CTTAAAAGTGGCAGACAGTTTATTACGGTCCCAATTGGCTGGTTTGAGCCATCAACCAACTGCGACTCAAGTCGCGTCTC
CGGCGGCTAATACTTATGCGGTTAATGCTGCGGTTCAAACAGTGGTTAAGAGTGAAGCAATTAGCCCCGCTAGGTTGATC
CAACCTAATCATGCTTGTGTGCCAGCTTACACTGCGCCTATTCCAGCGGATAAACCGTGTATTTGGAATTATGCTGATTT
AGTTGAATATGCCGAAGGCGATATCGCTAAGGTGTTTGGCCCAGATTACGCCATTATCGACAGTTACTCGCGCCGAGTTC
GCTTGCCGACCACAGATTATTTATTGGTGTCGCGTGTGACTAAACTCGATGCCACCATGAATCAATACAAACCGTGTTCA
ATGACCACAGAATACGACATCCCCGTCGATGCGCCGTATTTAGTGGATGGTCAAATTCCTTGGGCTGTAGCGGTAGAATC
GGGTCAGTGCGATTTAATGTTGATCAGTTATTTAGGTATCGACTTTGAAAACAAAGGCGAACGAGTTTATCGCTTATTAG
ATTGTACTTTGACCTTCTTAGCCGATTTACCTCGTGGCGGCGACACTCTGCGTTACGACATTAAAATCAATAACTTTGCC
AGCAATGGCGACACGTTATTATTCTTTTTCTCTTACGAGTGTTTCGTAGGCGACAAGATGATCCTAAAAATGGATGGTGG
CTGTGCAGGCTTCTTTACCGACCAAGAGCTGGCCGATGGTAAAGGGGTTATTCAAACTGAAGATGAAATAAAACATCGCC
AACAAGTGATCAACAATCCAAATAAACCAACCTTTACCCCATTACTCCACTGTAGCCAAACGGCATTTGATTATGGTCAA
ATCCATCATTTATTGACTGGTGATATTGGCAGCTGTTTTGGTGGCGACCATGTCGCGCACCAACTGCAAACTGGAATACA
AAAATCGCTTTGTTTTGCCTCAGAAAAATTCTTAATGATTGAGCGAGTGAGTCAATTACAAACACAAGGTGGCGCGTGGG
GCTTAGGCTTACTCGAAGGTCATAAACACATTGCGCCAGACCATTGGTATTTCCCTTGTCATTTCCAAGGCGACCAAGTG
ATGGCAGGCTCGTTAATGGCAGAAGGTTGTGGCCAGCTATTACAGTTCTTTATGATCCACATCGGCATGCATACTCTAGT
AGAAAATGGCCGATTCCAACCATTGGAAAATGCTTCGCAAAAAGTTCGCTGTCGTGGCCAAGTGTTACCACAAACGGCTG
AGCTGACCTATCGCATGGAAGTGACTGAAATCGGTATTCATCCCCGCCCGTATGCCAAAGCCAATATTGATATTTTACTC
AATGGAAAAGTCGTGGTCGATTTCCAAAACTTGGGTGTGATGATTAAAGAAGATGCCGAATGTACTCGTTATCCGCTTAT
CTCGTTAGACGCTAGCCCTGCAGTTGATTCAAACGCTAGCAGTAAAGTGATTGCTAACAAAGCGCCGTTAATGGCGCAAA
TTCCAGATTTAAACGCCCCGACTAACAAAGGCGTTATTCCACTAAAACACGTTGAAGCGCCCATTGTAAGCGCCGATTCA
AAGTACGCTAATCGCGTGCCTGATACCGTTCCATTTACCCCATACCATATGTTTGAGTTTGCTACTGGCGATATCGAAAA
ATGCTTTGGCCCTGACTTTAGTATTTACCGCGGACTTATCCCACCGCGCACACCTTGTGGCGACTTACAGTTAACCACTC
GCGTGGTTGAAATTAACGGTAAACGCGGCGAATTGAAAAAGCCATCATCGTGTATAGCAGAATACGAAGTGCCGGCAGAT
GCTTGGTACTTTGCTAAAAACAGCCATCAAGCGGTAATGCCTTATTCGGTGTTAATGGAAATTTCATTACAACCCAATGG
CTTTATTTCTGGCTACATGGGCACCACCCTAGGCTTTCCTGGGCAAGAGCTATTTTTCCGTAACTTAGACGGTGGCGGAC
AATTATTACGTCATGTGGATTTACGCGGTAAAACTATCGTCAATGATTCAAAGCTATTATCAACCGTCATTGCTGGCAGT
AACATTATTCAAAGCTTCACCTTTGAGTTAAGTGTCGATAACGAGCCTTTTTACACAGGTAGCGCGGTATTTGGTTACTT
TAAAGGTGATGCGCTTAAGAACCAGTTAGGCATAGATAACGGCAAAATAACTCAACCATGGCATGTTGATAACAATGTCA
TGGCAGACATCAGCGTTAACTTACTGGATAAACAGTCACGGGTATTTACTCCGCCAACTAGCCAACCGCATTATTGTTTA
GCGGGTGGCCAGCTTAACTTTATCGACAAAGCAGAAATTGTTGAAGCGGGCGGGAAATACGGTAAAGGCTATCTTGCTGC
GTCACGCACTATTGACCCTAGTGATTGGTTCTTCCAATTCCACTTCCATCAAGATCCGGTAATGCCAGGTTCATTAGGTG
TTGAAGCTGTGATCGAGTTAATGCAAACTTACGCCATCAGCACAGACCTAGGTAAAGGTTTCACTAATCCAAAGTTCGGC
CAAATATTGTCGGATATTAAATGGAAATATCGCGGTCAAATTAACCCACTGAACAAACAAATGTCACTTGATGTACATAT
CAGTGCAGTAAAAGATGAAGACGGTAAACGCATCATAATAGGCGACGCAAATCTCAGTAAAGATGGTCTGCGCATTTATG
AAGTCAAAGATATCGCCATCTGTATTGAAGAAGCTTAG

Upstream 100 bases:

>100_bases
GCCTTGACGATGCAATTAACTCATTATCTCAGCAGACGGCAATAGCCGGCGGCTCACCACTGTCTCGTTGCAGTGAAACA
TCATTAGAAGGAGAACCTCA

Downstream 100 bases:

>100_bases
GCCAAAAAGGAATAATAATGACAACTCAAGTGCACAACGAAAAGCTTTCTCCTTGGCCATGGCAAGTTAGCCAGCAACAC
GTCAGTTTTGACTCTACTGG

Product: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1985_residues
MSSQATPKIAIVGLANQYPDADTPAKFWQNLLDKKDSRSQISASKLNASPSDYLGVQGESDRFYCDKGGYIQDFQFNPQG
YRIEPDAFTGLDDSFLWATDTARNALTDAGIDLSNNVLQRTGIVMGTLSFPTAKSNELFVPLYHSAVEKALQIKLQQPNF
NLQSFNQASQNNTAENANNNNNVAPKTVNLRNGAIAHNASKIVADALGLGGTQLSLDAACASSVYALKLACDYLHTGKSD
MMLAGAVSGADPFFINMGFSIFHAYPDHGISAPFDSNSKGLFAGEGAGVLVLKRLEDAERDGDHIYALVSGIGLSNDGKG
QFVLSPNSKGQVQAFERAYRDAAAIDPGITPASIEVIECHATGTPLGDKVELTSMERFFEDKLQGSATPLIGSAKSNLGH
LLTAAGMPGIMKMIFAMREGVLPPSINISAPIASPNGLFGQATLPNDVLPWPDKVGNKARHAGVSVFGFGGCNAHLLLES
YQAKAVTDKTLNNHSQNNNSLSNNALNNNIQTRSTALVDAETPMHITGMAAHFGQCSSIDALASKIIAKQAIFSPLPTQR
WKGLDKHPELLAQYGITDVPQGAYIDQFDFDFLRFKVPPNEDDRLISQQLLLIKVADEAIADAKLTPGSKVAVLVAMETE
LELHQFRGRVNLHSQIAQSLNAQGIQLSTAEYDSLETIAMDSVLDAAKLNQYTSFIGNIMASRIASLWDFNGPAFTISAG
EQSVNRCIDVAQNLFALGSLQEPLDAIIIAAVDLSGSIENMLFNTAKLNAKGLRSTDWLVGEGAGALVLQQTSAVHSQLD
SYASIDSVNFTPLSQLPTQLPTQLPTELSADIVELNQSPECILTTQGRQFTQRLTDAATAVSSAPLLSKAHDILGHTFAA
SGMASLLHGLVQTRHIDKPSINASVFTSSDNQYSQVNLSVSAAQQHALHARLGNNLTQQLATGSKLSLIKQVSLGGRDIY
QHIIDSPLDTLDSIINQCADIAPTVVSSTESKQPTIGDNSPLSVNNSENIAEPLMSENMPNKTIPKQPRVASMTNHTIPP
AHLTAFQQNQWLAQQAHLAYLASRDAGLKVADSLLRSQLAGLSHQPTATQVASPAANTYAVNAAVQTVVKSEAISPARLI
QPNHACVPAYTAPIPADKPCIWNYADLVEYAEGDIAKVFGPDYAIIDSYSRRVRLPTTDYLLVSRVTKLDATMNQYKPCS
MTTEYDIPVDAPYLVDGQIPWAVAVESGQCDLMLISYLGIDFENKGERVYRLLDCTLTFLADLPRGGDTLRYDIKINNFA
SNGDTLLFFFSYECFVGDKMILKMDGGCAGFFTDQELADGKGVIQTEDEIKHRQQVINNPNKPTFTPLLHCSQTAFDYGQ
IHHLLTGDIGSCFGGDHVAHQLQTGIQKSLCFASEKFLMIERVSQLQTQGGAWGLGLLEGHKHIAPDHWYFPCHFQGDQV
MAGSLMAEGCGQLLQFFMIHIGMHTLVENGRFQPLENASQKVRCRGQVLPQTAELTYRMEVTEIGIHPRPYAKANIDILL
NGKVVVDFQNLGVMIKEDAECTRYPLISLDASPAVDSNASSKVIANKAPLMAQIPDLNAPTNKGVIPLKHVEAPIVSADS
KYANRVPDTVPFTPYHMFEFATGDIEKCFGPDFSIYRGLIPPRTPCGDLQLTTRVVEINGKRGELKKPSSCIAEYEVPAD
AWYFAKNSHQAVMPYSVLMEISLQPNGFISGYMGTTLGFPGQELFFRNLDGGGQLLRHVDLRGKTIVNDSKLLSTVIAGS
NIIQSFTFELSVDNEPFYTGSAVFGYFKGDALKNQLGIDNGKITQPWHVDNNVMADISVNLLDKQSRVFTPPTSQPHYCL
AGGQLNFIDKAEIVEAGGKYGKGYLAASRTIDPSDWFFQFHFHQDPVMPGSLGVEAVIELMQTYAISTDLGKGFTNPKFG
QILSDIKWKYRGQINPLNKQMSLDVHISAVKDEDGKRIIIGDANLSKDGLRIYEVKDIAICIEEA

Sequences:
NA

Specific function: NA

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA