Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114562239

GI number:

Start: 1248096

End: 1250681

Strand: Reverse

Name: Not Available

Synonym: Sfri_1061

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562247

Following gene: 114562225

Centisome position: NA

GC content: NA

Gene sequence:

>2586_bases
ATGACAGTGATTGATACCAGCGATTTAGAAAAACACACCCCGATGATGCGCCAGTATTTGGGCTTAAAAGCGGCCCATCC
TGATATGTTATTGTTTTATCGAATGGGTGATTTTTATGAGCTGTTTTACGATGACGCTAAACGCGCTTCTGAAATGCTAG
GTATTTCACTGACGGCTCGTGGAAAAAGCGGCGGAGACCCGATTCCCATGGCAGGCATTCCATATCACGCCGTCGAAGGC
TATTTAGCAAAATTAGTTAACATTGGTCAGTCTGTGGCTATTTGTGAGCAAATTGGTGATCCAGCGACATCGAAAGGGCC
CGTTGAACGCCAAGTGGTGCGTATTGTGACCCCTGGCACCTTAACCGACGAAGCTTTACTGCAAGAAAAACAAGACAATT
TACTGGCGGCACTGTATCAGGGTAAAACGGGTTTTGGTTACGCGACGTTGGATATTTCATCAGGTCGTTTTGTGGTTGCT
GAATTACCCACTCGTGAAGCTTTAGAAGCCGAATTACAACGCACTAATCCAGCTGAGCTACTGTACAGTGAAGATTTTAC
TGACATGTTATTGATCAATAATATGAAAGGCATCCGTCGTCGCCCTGAGTGGGAGTTTGACTACGACACCTGTATTAATT
TACTGCTCAATCAATTTGGCACCAAAGATTTACACGGTTTTGGAATTACTGATGCACGATTAGCGTTACAAGCTGCAGGT
TGTTTAATGCAGTATGTCAAAGATACCCAAAAGATGGCGTTGCCACATATCAACTCGATTGTGCGCTTTAATCAATCAGA
ATCAATTATTTTAGATGCCGCAACCAGACGTAATTTAGAGTTAACTCAAAATTTATCTGGTGGGCGGGAGAATACTCTCG
CATGGGTATTGGATAATACTGCCACCCCTATGGGTAGCCGTATGTTACAACGTTGGATCCATGAGCCATTACGCAATCGT
CAAACAATTCAATATCGACATAGTGCGGTCAGTGAACTGATTGAACAAGATTTGTATCAAACGTTACATGAGCAACTAAA
AAGCTTAGGTGATATCGAACGTATTATGGCTCGTTTAGCACTACGTAGTGCCAGACCACGTGATTTTTCACGCTTAAAGC
AAGCACTAACGCTTCTGCCTGAAATCCAGCAAACATTAGCAATATGCCAACAACCTCGATTAAACACGTTAGTACAATTA
CTGGGTGAATTTCCTGAACAACACGATTTATTAGAACGCGCTATTGTAGACAACCCTCCCATGTTAATTCGTGATGGTGG
CGTTATCCGTACTGGCTATAATAATGAGTTAGATGAATGGCGCAAGTTGAGTGAAGGCGCCAGTGATTATTTAGTCGAAC
TTGAAGCTCGTGAGAAACAACAAACAGGGATTAATACCTTAAAAGTCGGCTATAACCGAGTTCATGGTTACTATATTGAA
GTGAGCCGTTTACAGTCAGATAGAGTGCCACTGAGCTATCAGCGCCGCCAAACACTCAAAGGCACCGAACGTTATATCAC
CCCAGAATTGAAAGAATACGAAGAGAAAGTACTGTCTAGCCAGGGCAAAGCACTCGCGCTTGAAAAACAACTGTGGGAAC
AACTGTTTGACTTGTTGTTACCTAAACTACAAGAATTACAGCAGTTTGCAACGGCTGCTGCCGAGTTAGATATATTAAGT
AACTTTGCCGAACGAGCAGAGTTATTTAATTATCAATGCCCACAAATGAGCCACGACATTGGCATTAATATTGAAGCGGG
CCGCCATCCTGTCGTTGAGCGAGTTAGCCAAGCAGCGTTTATTGCTAACCCAGTTGCATTAACACCACAGCGCCAAATGC
TTATTGTTACAGGCCCAAATATGGGCGGTAAATCAACCTATATGCGCCAAGTAGCATTGATTACATTAATGGCACATATC
GGCTGTTTCGTTCCAGCAGACCATGCTCAAATTGGTGAAATCGACCGGATTTTTACCCGTATTGGTGCATCAGATGATTT
GGCATCAGGCCGGTCAACTTTCATGGTTGAAATGACCGAAACAGCTAATATTTTACATAATGCGACTGCGAACAGTTTAG
TGTTAATGGACGAAATCGGTCGCGGCACCTCAACCTATGATGGTTTGGCACTCGCTTGGTCTGCTGCTGAATATCTTGCG
AAAAACGTCAGTGCCCTGACATTATTTGCTACTCATTATTTTGAGTTAACCCAATTGCCCGAGCTGTTACCGTCAGTAAT
TAATGTGCATTTAGATGCAATAGAACACGACGACACAATTGCCTTTATGCATTCGGTACAAGAAGGTGCTGCAAGTAAAA
GTTATGGTCTACAAGTTGCAGCCCTAGCGGGTGTTCCGGCCTCCGTCATTAAAGCGGCAAAACATAAGCTTCATCAACTG
GAAAACCGAGATATGACATTATCTCAACAGAATCCAACTCAAGTGAGTATGAACTTATTACCTCCAATTCCAGAGCCATC
ACTAGCACTGGAAAAGTTAGCCCAAATTAATCCAGACGAGTTGACGCCGAAGCAGGCTTTAGATTATTTGTATGAATTGA
AGCGATTAAGTCACACGAACACCTAG

Upstream 100 bases:

>100_bases
ATTTTTTGTTTGAATCTATTTATACGCTGGGGACAAATATTGTTAAGATTAGCCCCATAAGATTTACGTCCTACGATTGA
TTAATAGTGAAGTGTTCATA

Downstream 100 bases:

>100_bases
CGCCGAAAATAACTGCTTAAGTGTTTTTTTGAACTGTGGAAGCCTGCAAAGGCTTCCATTTCAATGACATATCAGGTGTT
ACATCGAACAAGTAACAGTC

Product: DNA mismatch repair protein MutS

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>861_residues
MTVIDTSDLEKHTPMMRQYLGLKAAHPDMLLFYRMGDFYELFYDDAKRASEMLGISLTARGKSGGDPIPMAGIPYHAVEG
YLAKLVNIGQSVAICEQIGDPATSKGPVERQVVRIVTPGTLTDEALLQEKQDNLLAALYQGKTGFGYATLDISSGRFVVA
ELPTREALEAELQRTNPAELLYSEDFTDMLLINNMKGIRRRPEWEFDYDTCINLLLNQFGTKDLHGFGITDARLALQAAG
CLMQYVKDTQKMALPHINSIVRFNQSESIILDAATRRNLELTQNLSGGRENTLAWVLDNTATPMGSRMLQRWIHEPLRNR
QTIQYRHSAVSELIEQDLYQTLHEQLKSLGDIERIMARLALRSARPRDFSRLKQALTLLPEIQQTLAICQQPRLNTLVQL
LGEFPEQHDLLERAIVDNPPMLIRDGGVIRTGYNNELDEWRKLSEGASDYLVELEAREKQQTGINTLKVGYNRVHGYYIE
VSRLQSDRVPLSYQRRQTLKGTERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLLLPKLQELQQFATAAAELDILS
NFAERAELFNYQCPQMSHDIGINIEAGRHPVVERVSQAAFIANPVALTPQRQMLIVTGPNMGGKSTYMRQVALITLMAHI
GCFVPADHAQIGEIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGLALAWSAAEYLA
KNVSALTLFATHYFELTQLPELLPSVINVHLDAIEHDDTIAFMHSVQEGAASKSYGLQVAALAGVPASVIKAAKHKLHQL
ENRDMTLSQQNPTQVSMNLLPPIPEPSLALEKLAQINPDELTPKQALDYLYELKRLSHTNT

Sequences:
NA

Specific function: NA

COG id: COG0249

COG function: function code L; Mismatch repair ATPase (MutS family)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA