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The map label for this gene is ybhP [H]

Identifier: 114332258

GI number: 114332258

Start: 2423862

End: 2424623

Strand: Reverse

Name: ybhP [H]

Synonym: Neut_2298

Alternate gene names: 114332258

Gene position: 2424623-2423862 (Counterclockwise)

Preceding gene: 114332259

Following gene: 114332257

Centisome position: 91.12

GC content: 49.08

Gene sequence:

>762_bases
ATGCGTGAATCTAATCGGACATTACATATCGCAACTTATAACATTCACAAGGGGCTGTCGTTTTTTAATCAGCGTGTGGT
ATTGCATGAATTGCGTGACTATTTGCGTAGCCTGAATGTCGATATCATTTTTTTGCAAGAGGTGATCGGGGAGCATACGC
TGCATGCCAGCCGCTTTCAGGATTGGCCGAAAGATGCTCAGTATGAATTTTTGGCGGATGCAGTGTGGTCGGATTTTGCC
TATGGAAAGAATGCGGTTTATAACCATGGCCATCACGGCAATGCCATTCTCAGCCGCTTTCCCATATCAAGCTGGGAGAA
TGAAGATATTTCGGCACACCGATTTGAAAGTCGCGGATTGTTACATTGCGAGCTGGCCATTCCCGGATGGAAAGACGCGT
TGCACTGCATCTGTGTGCATCTGGGGCTGTTTAAGCGTGGAAGGTATCGGCAGCTGGAGGCCATAGAGCGCCGCATCCGG
CAACTGGTACCGCCTGATGCACCGCTCGTACTCGCGGGAGATTTTAATGACTGGCGTGGTGTGGCAAATCAGGCTTTGGC
CAGTCGCTTGAATCTGGTTGAGGTTTTTCAGTATACGCAGGGTAAGGCGGCGCGCAGTTTTCCATCTGTTTTGCCGTTGC
TGCGTCTGGATAGAATTTATATCCGTGGTTTTCAGGTAAAAAATGCCCGGATTTTTCATAATCGCCCCTGGTCCAGAATT
TCAGACCATGCTGCGTTGTCGGCCCAGATTATGCGTAAATGA

Upstream 100 bases:

>100_bases
TCGAAAAGATGCTTGAGGTCTCGAAATAGTATCGATGGTGAAATTGCCGGTTTTGTCTGCGGATACTGACAGGATTGCTT
CTCTGCCAGGAAACGAAGCA

Downstream 100 bases:

>100_bases
GTTTGCCTGATTTTGTCGAAGGAAACTGTATAACACTACTGCATTCCGGCACGGAATATTTCCCGGTGCTGGAATCGGCC
ATTGATTCGACCAGGCAGGA

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRESNRTLHIATYNIHKGLSFFNQRVVLHELRDYLRSLNVDIIFLQEVIGEHTLHASRFQDWPKDAQYEFLADAVWSDFA
YGKNAVYNHGHHGNAILSRFPISSWENEDISAHRFESRGLLHCELAIPGWKDALHCICVHLGLFKRGRYRQLEAIERRIR
QLVPPDAPLVLAGDFNDWRGVANQALASRLNLVEVFQYTQGKAARSFPSVLPLLRLDRIYIRGFQVKNARIFHNRPWSRI
SDHAALSAQIMRK

Sequences:

>Translated_253_residues
MRESNRTLHIATYNIHKGLSFFNQRVVLHELRDYLRSLNVDIIFLQEVIGEHTLHASRFQDWPKDAQYEFLADAVWSDFA
YGKNAVYNHGHHGNAILSRFPISSWENEDISAHRFESRGLLHCELAIPGWKDALHCICVHLGLFKRGRYRQLEAIERRIR
QLVPPDAPLVLAGDFNDWRGVANQALASRLNLVEVFQYTQGKAARSFPSVLPLLRLDRIYIRGFQVKNARIFHNRPWSRI
SDHAALSAQIMRK
>Mature_253_residues
MRESNRTLHIATYNIHKGLSFFNQRVVLHELRDYLRSLNVDIIFLQEVIGEHTLHASRFQDWPKDAQYEFLADAVWSDFA
YGKNAVYNHGHHGNAILSRFPISSWENEDISAHRFESRGLLHCELAIPGWKDALHCICVHLGLFKRGRYRQLEAIERRIR
QLVPPDAPLVLAGDFNDWRGVANQALASRLNLVEVFQYTQGKAARSFPSVLPLLRLDRIYIRGFQVKNARIFHNRPWSRI
SDHAALSAQIMRK

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=244, Percent_Identity=47.5409836065574, Blast_Score=244, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 29390; Mature: 29390

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESNRTLHIATYNIHKGLSFFNQRVVLHELRDYLRSLNVDIIFLQEVIGEHTLHASRFQ
CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHC
DWPKDAQYEFLADAVWSDFAYGKNAVYNHGHHGNAILSRFPISSWENEDISAHRFESRGL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCE
LHCELAIPGWKDALHCICVHLGLFKRGRYRQLEAIERRIRQLVPPDAPLVLAGDFNDWRG
EEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
VANQALASRLNLVEVFQYTQGKAARSFPSVLPLLRLDRIYIRGFQVKNARIFHNRPWSRI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCEEEECCCCCHHH
SDHAALSAQIMRK
HHHHHHHHHHHCC
>Mature Secondary Structure
MRESNRTLHIATYNIHKGLSFFNQRVVLHELRDYLRSLNVDIIFLQEVIGEHTLHASRFQ
CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHC
DWPKDAQYEFLADAVWSDFAYGKNAVYNHGHHGNAILSRFPISSWENEDISAHRFESRGL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCE
LHCELAIPGWKDALHCICVHLGLFKRGRYRQLEAIERRIRQLVPPDAPLVLAGDFNDWRG
EEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
VANQALASRLNLVEVFQYTQGKAARSFPSVLPLLRLDRIYIRGFQVKNARIFHNRPWSRI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCEEEECCCCCHHH
SDHAALSAQIMRK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]