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The map label for this gene is 114332178

Identifier: 114332178

GI number: 114332178

Start: 2346917

End: 2347288

Strand: Direct

Name: 114332178

Synonym: Neut_2217

Alternate gene names: NA

Gene position: 2346917-2347288 (Clockwise)

Preceding gene: 114332177

Following gene: 114332179

Centisome position: 88.19

GC content: 43.55

Gene sequence:

>372_bases
ATGACACTTGATCTGAAAACCAATCCGCCCCCTGCCACCCTGTTTTCGAAAGATGCAAAAGATATTGCTGAGTTGCTTAA
TAAGGACACAAGCAAAAACAAATCAACTCAAATCCGGCGCTTTTATGATGAACTGGTCGGTTGGCAGGAACGCATCGGAA
CAGATGAACAAAAATTCAAGGATTATGAAGCGTTTATCCACATGCTTAATGCCAAGGCTGCCTATGCACAGGGCCGCAAA
CTGGTCACCCAGGAATTCGTTGAGTGGTTGAACAGTTGCATCAAACAGGTAACAGATACGCGTACATTGAATCATTTCCG
GCTGCACTTTGAAGCCATGCTCGGATTTCTTAAGTTCTTCAAAAGAGATTAA

Upstream 100 bases:

>100_bases
TATCGCCAGCGACAATGACGACAAGCTTGCCGCCCGGCAATCAAACCGGGCAGCCATTTATTATCAACACCTACTATCGA
CAACATACGGAGATCACAAA

Downstream 100 bases:

>100_bases
TTGTGCCCGTGACATCAACTTTCCAATTATTTGTCGCCTAAAGGAATCCATCATGCAACTGACTCAAATCCAGAAAATCA
TCGGTACCATTGTTCTTCAA

Product: CRISPR-associated Csm2 family protein

Products: NA

Alternate protein names: Crispr-Associated Protein Csm2 Family; CRISPR-Associated Csm2 Family Protein

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTLDLKTNPPPATLFSKDAKDIAELLNKDTSKNKSTQIRRFYDELVGWQERIGTDEQKFKDYEAFIHMLNAKAAYAQGRK
LVTQEFVEWLNSCIKQVTDTRTLNHFRLHFEAMLGFLKFFKRD

Sequences:

>Translated_123_residues
MTLDLKTNPPPATLFSKDAKDIAELLNKDTSKNKSTQIRRFYDELVGWQERIGTDEQKFKDYEAFIHMLNAKAAYAQGRK
LVTQEFVEWLNSCIKQVTDTRTLNHFRLHFEAMLGFLKFFKRD
>Mature_122_residues
TLDLKTNPPPATLFSKDAKDIAELLNKDTSKNKSTQIRRFYDELVGWQERIGTDEQKFKDYEAFIHMLNAKAAYAQGRKL
VTQEFVEWLNSCIKQVTDTRTLNHFRLHFEAMLGFLKFFKRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14494; Mature: 14363

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDLKTNPPPATLFSKDAKDIAELLNKDTSKNKSTQIRRFYDELVGWQERIGTDEQKFK
CCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
DYEAFIHMLNAKAAYAQGRKLVTQEFVEWLNSCIKQVTDTRTLNHFRLHFEAMLGFLKFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRD
HCC
>Mature Secondary Structure 
TLDLKTNPPPATLFSKDAKDIAELLNKDTSKNKSTQIRRFYDELVGWQERIGTDEQKFK
CCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
DYEAFIHMLNAKAAYAQGRKLVTQEFVEWLNSCIKQVTDTRTLNHFRLHFEAMLGFLKFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRD
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA