| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is yfgM [C]
Identifier: 114332131
GI number: 114332131
Start: 2296013
End: 2296651
Strand: Reverse
Name: yfgM [C]
Synonym: Neut_2166
Alternate gene names: 114332131
Gene position: 2296651-2296013 (Counterclockwise)
Preceding gene: 114332132
Following gene: 114332130
Centisome position: 86.31
GC content: 49.77
Gene sequence:
>639_bases ATGTCTGCATACAACTTTGAAGAACAGGAAAAAATAGATCGGCTGAAGGCCTGGTGGTCTGCTAATGGCGCAACGTTATT GCTTACTATAGTTGTTTTTGCAGCAGTAGTGGTGGGTACCCGGCTATGGAATCATTACAAGGGCGAGCAGGCTAGACAGG CGGCTGATTTATATACCGTTCTCCAGCAACAGGTCGAAAAGGGAAGTGAGTTTGAAAAGATAACAGATGCAGCGCAGCTG CTCATCCAAGGTTTTCCCGGGAGTGGTTATGCCTCGCGTGCAGCGCTGATTGCTGCCCATTCTGCAGTGCAGGCAGGTAA TAACCAGTCTGCCAGAGATATGCTGCAATGGGTGCTTGATCATACCGAAGAACCCGAAGTGAAAGATCTTGCCCGGATAC GACTGGCAAATGTGCTAGTGGATGAGGGTAAATATGATCAGGCACTGTCACTGTTGAACGCACAGCATGGTGCTTCTTTT ACCGGGCTCTATGCAGATTTGCGGGGAGATGCGCTGGCTGCTTCCGGGAAAATAGATGAAGCACGTGCAGCCTATCAGAA GGCACTGGACAGCCTGGATACGCAGGGTGCCTACCGGAATGTGGTACAGATGAAACTGGATGCATTGAGAGAACATTAA
Upstream 100 bases:
>100_bases ATCAAGTCATTACGTGAGGCAGTGGAGCAAGTCAAAATTGATTTGACGAAAGTCGCCGTGTTTCTGGAAAATATTTAATG AAGATGGAAGGTAAGAAATA
Downstream 100 bases:
>100_bases TAGTGGCTGGAAATATTCTGTTATTAATCCTTGATTATGTTTTTCATGCAGGCAGCCGGACACTGCGTGTCTGTATCCTT TCTTTACTGATCTTGCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSAYNFEEQEKIDRLKAWWSANGATLLLTIVVFAAVVVGTRLWNHYKGEQARQAADLYTVLQQQVEKGSEFEKITDAAQL LIQGFPGSGYASRAALIAAHSAVQAGNNQSARDMLQWVLDHTEEPEVKDLARIRLANVLVDEGKYDQALSLLNAQHGASF TGLYADLRGDALAASGKIDEARAAYQKALDSLDTQGAYRNVVQMKLDALREH
Sequences:
>Translated_212_residues MSAYNFEEQEKIDRLKAWWSANGATLLLTIVVFAAVVVGTRLWNHYKGEQARQAADLYTVLQQQVEKGSEFEKITDAAQL LIQGFPGSGYASRAALIAAHSAVQAGNNQSARDMLQWVLDHTEEPEVKDLARIRLANVLVDEGKYDQALSLLNAQHGASF TGLYADLRGDALAASGKIDEARAAYQKALDSLDTQGAYRNVVQMKLDALREH >Mature_211_residues SAYNFEEQEKIDRLKAWWSANGATLLLTIVVFAAVVVGTRLWNHYKGEQARQAADLYTVLQQQVEKGSEFEKITDAAQLL IQGFPGSGYASRAALIAAHSAVQAGNNQSARDMLQWVLDHTEEPEVKDLARIRLANVLVDEGKYDQALSLLNAQHGASFT GLYADLRGDALAASGKIDEARAAYQKALDSLDTQGAYRNVVQMKLDALREH
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=202, Percent_Identity=28.2178217821782, Blast_Score=68, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 23321; Mature: 23190
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYNFEEQEKIDRLKAWWSANGATLLLTIVVFAAVVVGTRLWNHYKGEQARQAADLYTV CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LQQQVEKGSEFEKITDAAQLLIQGFPGSGYASRAALIAAHSAVQAGNNQSARDMLQWVLD HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC HTEEPEVKDLARIRLANVLVDEGKYDQALSLLNAQHGASFTGLYADLRGDALAASGKIDE CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCHH ARAAYQKALDSLDTQGAYRNVVQMKLDALREH HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAYNFEEQEKIDRLKAWWSANGATLLLTIVVFAAVVVGTRLWNHYKGEQARQAADLYTV CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LQQQVEKGSEFEKITDAAQLLIQGFPGSGYASRAALIAAHSAVQAGNNQSARDMLQWVLD HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC HTEEPEVKDLARIRLANVLVDEGKYDQALSLLNAQHGASFTGLYADLRGDALAASGKIDE CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCHH ARAAYQKALDSLDTQGAYRNVVQMKLDALREH HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]