Click here to switch to the map view.

The map label for this gene is yfgL [H]

Identifier: 114332130

GI number: 114332130

Start: 2294781

End: 2296010

Strand: Reverse

Name: yfgL [H]

Synonym: Neut_2165

Alternate gene names: 114332130

Gene position: 2296010-2294781 (Counterclockwise)

Preceding gene: 114332131

Following gene: 114332129

Centisome position: 86.28

GC content: 50.24

Gene sequence:

>1230_bases
GTGGCTGGAAATATTCTGTTATTAATCCTTGATTATGTTTTTCATGCAGGCAGCCGGACACTGCGTGTCTGTATCCTTTC
TTTACTGATCTTGCTAAGCGGTTGCGCAAATTTGAGTGACCTGGGAGGGGGACATTTAACTGATCTTTTCAGTAGTGAAG
AAGATGAGGTTGAAATCGATGAAGCCGAGATTGTTGCGCTACAGACATTGGCCCCGATCAACCCGCTCTGGCAGGTCAAG
CTGGCAGAAAGTAAAACTGCAGTTTTTTTGCCGGTCTACGATAACGGAGCCCTTTACGTTGCTGATGAAGATGGGCGTTT
GGTCAAACTCGACCCGGTGACAGGTCGCGAGATCTGGCGTGTAGAGACTAAATCCCAGCTTTCTGGAGGAGTCGGTGCTG
GCGGAGGAATGATTCTGCTCGGAACCTACAAGGGTGAAGTGCTGGCATTTGATGAGGCGGGTAACGCCTTGTGGCAATCC
CGGGTTCCTGGTGAAGTCTTGAGCCCGCCAAAGACAGACAGTGGCATTGTAGTCGTGCGTACCGGTGATAGTAAATTATT
TGGTCTGAATGCAACGGATGGAAAACGTATCTGGAGCTATCAAAGTGTCACACCGCCGCTGACAGTCAGAAGTTTTGTCG
GAGTATCAATTACCCGGGGTGCTGTCTTTGCCGGATTTCCCGGCGGGAAATTAATTGCGCTGGATTTGCTTACCGGTAAT
GTAGGCTGGGAAGAAACTGTTTCACAACCGCATGGTGTTACCGAGCTGGAACGTATGACTGATATCAGCAGTCTGCCGAT
TGTCGATGAAAACCAGGTGTGCGCAGTGGCTTATCGCGGACGTGCTGCCTGCTTCGAAATTTCCAGTGGTAATCAGATTT
GGGCGAGAGATGCGTCAAGCAGCATGGGGATGGTGATTGATAACCATCACGTATACATCAGCGAAGAACATGGAATCGTC
GCTGCTTACGACAAAAGTAGTGGTACGGCCGTCTGGAAGCGTGGAAAGCTGGGCAGCCGGAAGCTCTCTGGCTTGATGAT
CGTCAGAGGTAACCGGCTGGTGGTCGGGGATGATCAAGGGTTTGTTACTCTGATCAACCGTCAGGATGGCTCCCTGCTTG
CCCGTTCACCCACGGATGGAGGCATAATTTTGTCGCGTGCTGAATATCTACCGGATGGCTTTGTAGTACAAACACTCAAA
GGCGGTGTTTTCGCTTTTTCCTTGCAATAA

Upstream 100 bases:

>100_bases
CACGTGCAGCCTATCAGAAGGCACTGGACAGCCTGGATACGCAGGGTGCCTACCGGAATGTGGTACAGATGAAACTGGAT
GCATTGAGAGAACATTAATA

Downstream 100 bases:

>100_bases
CCGGATTTTTCTATGCTTTCCGGGTAAAGCATTTTTCATATCTCCTTTATCATGAAACCCACTCTCGTACTGGTTGGGCG
TCCGAATGTCGGAAAATCGA

Product: Pyrrolo-quinoline quinone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MAGNILLLILDYVFHAGSRTLRVCILSLLILLSGCANLSDLGGGHLTDLFSSEEDEVEIDEAEIVALQTLAPINPLWQVK
LAESKTAVFLPVYDNGALYVADEDGRLVKLDPVTGREIWRVETKSQLSGGVGAGGGMILLGTYKGEVLAFDEAGNALWQS
RVPGEVLSPPKTDSGIVVVRTGDSKLFGLNATDGKRIWSYQSVTPPLTVRSFVGVSITRGAVFAGFPGGKLIALDLLTGN
VGWEETVSQPHGVTELERMTDISSLPIVDENQVCAVAYRGRAACFEISSGNQIWARDASSSMGMVIDNHHVYISEEHGIV
AAYDKSSGTAVWKRGKLGSRKLSGLMIVRGNRLVVGDDQGFVTLINRQDGSLLARSPTDGGIILSRAEYLPDGFVVQTLK
GGVFAFSLQ

Sequences:

>Translated_409_residues
MAGNILLLILDYVFHAGSRTLRVCILSLLILLSGCANLSDLGGGHLTDLFSSEEDEVEIDEAEIVALQTLAPINPLWQVK
LAESKTAVFLPVYDNGALYVADEDGRLVKLDPVTGREIWRVETKSQLSGGVGAGGGMILLGTYKGEVLAFDEAGNALWQS
RVPGEVLSPPKTDSGIVVVRTGDSKLFGLNATDGKRIWSYQSVTPPLTVRSFVGVSITRGAVFAGFPGGKLIALDLLTGN
VGWEETVSQPHGVTELERMTDISSLPIVDENQVCAVAYRGRAACFEISSGNQIWARDASSSMGMVIDNHHVYISEEHGIV
AAYDKSSGTAVWKRGKLGSRKLSGLMIVRGNRLVVGDDQGFVTLINRQDGSLLARSPTDGGIILSRAEYLPDGFVVQTLK
GGVFAFSLQ
>Mature_408_residues
AGNILLLILDYVFHAGSRTLRVCILSLLILLSGCANLSDLGGGHLTDLFSSEEDEVEIDEAEIVALQTLAPINPLWQVKL
AESKTAVFLPVYDNGALYVADEDGRLVKLDPVTGREIWRVETKSQLSGGVGAGGGMILLGTYKGEVLAFDEAGNALWQSR
VPGEVLSPPKTDSGIVVVRTGDSKLFGLNATDGKRIWSYQSVTPPLTVRSFVGVSITRGAVFAGFPGGKLIALDLLTGNV
GWEETVSQPHGVTELERMTDISSLPIVDENQVCAVAYRGRAACFEISSGNQIWARDASSSMGMVIDNHHVYISEEHGIVA
AYDKSSGTAVWKRGKLGSRKLSGLMIVRGNRLVVGDDQGFVTLINRQDGSLLARSPTDGGIILSRAEYLPDGFVVQTLKG
GVFAFSLQ

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=393, Percent_Identity=28.2442748091603, Blast_Score=168, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 43737; Mature: 43606

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNILLLILDYVFHAGSRTLRVCILSLLILLSGCANLSDLGGGHLTDLFSSEEDEVEID
CCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEC
EAEIVALQTLAPINPLWQVKLAESKTAVFLPVYDNGALYVADEDGRLVKLDPVTGREIWR
CEEEEEEEECCCCCCEEEEEEECCCEEEEEEEECCCEEEEECCCCCEEEECCCCCCEEEE
VETKSQLSGGVGAGGGMILLGTYKGEVLAFDEAGNALWQSRVPGEVLSPPKTDSGIVVVR
EECHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHCCCCCHHCCCCCCCCCEEEEE
TGDSKLFGLNATDGKRIWSYQSVTPPLTVRSFVGVSITRGAVFAGFPGGKLIALDLLTGN
ECCCEEEEECCCCCCEEEEECCCCCCEEEHHHCCEEEECCEEEEECCCCCEEEEEEEECC
VGWEETVSQPHGVTELERMTDISSLPIVDENQVCAVAYRGRAACFEISSGNQIWARDASS
CCCHHHHCCCCCCHHHHHHHCCCCCCEECCCCEEEEEECCCEEEEEECCCCEEEEECCCC
SMGMVIDNHHVYISEEHGIVAAYDKSSGTAVWKRGKLGSRKLSGLMIVRGNRLVVGDDQG
CCCEEEECCEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCEEEEECCCC
FVTLINRQDGSLLARSPTDGGIILSRAEYLPDGFVVQTLKGGVFAFSLQ
EEEEEECCCCCEEEECCCCCCEEEEEHHHCCCCEEEEEECCCEEEEEEC
>Mature Secondary Structure 
AGNILLLILDYVFHAGSRTLRVCILSLLILLSGCANLSDLGGGHLTDLFSSEEDEVEID
CCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEC
EAEIVALQTLAPINPLWQVKLAESKTAVFLPVYDNGALYVADEDGRLVKLDPVTGREIWR
CEEEEEEEECCCCCCEEEEEEECCCEEEEEEEECCCEEEEECCCCCEEEECCCCCCEEEE
VETKSQLSGGVGAGGGMILLGTYKGEVLAFDEAGNALWQSRVPGEVLSPPKTDSGIVVVR
EECHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHCCCCCHHCCCCCCCCCEEEEE
TGDSKLFGLNATDGKRIWSYQSVTPPLTVRSFVGVSITRGAVFAGFPGGKLIALDLLTGN
ECCCEEEEECCCCCCEEEEECCCCCCEEEHHHCCEEEECCEEEEECCCCCEEEEEEEECC
VGWEETVSQPHGVTELERMTDISSLPIVDENQVCAVAYRGRAACFEISSGNQIWARDASS
CCCHHHHCCCCCCHHHHHHHCCCCCCEECCCCEEEEEECCCEEEEEECCCCEEEEECCCC
SMGMVIDNHHVYISEEHGIVAAYDKSSGTAVWKRGKLGSRKLSGLMIVRGNRLVVGDDQG
CCCEEEECCEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCEEEEECCCC
FVTLINRQDGSLLARSPTDGGIILSRAEYLPDGFVVQTLKGGVFAFSLQ
EEEEEECCCCCEEEECCCCCCEEEEEHHHCCCCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]