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The map label for this gene is tapB [H]

Identifier: 114332093

GI number: 114332093

Start: 2256673

End: 2259054

Strand: Reverse

Name: tapB [H]

Synonym: Neut_2128

Alternate gene names: 114332093

Gene position: 2259054-2256673 (Counterclockwise)

Preceding gene: 114332094

Following gene: 114332092

Centisome position: 84.89

GC content: 49.03

Gene sequence:

>2382_bases
ATGAGTACATCTCAGGTTTTTCAAGCTGGTTCGGGCATTGTCCCCGCAGCGGGAATTTCACTCAATTCCGCCAATCGTCT
GCGTTCCGTGATTGACAGGATTCACGCAGCAGGGAATATCGACGAAATCATGTTTGAGGTGAGCCGGGATATCTGCGAGG
TGTTTAATGCAGATCGTCTGACAATTTATACCGTAAGTGGTGATAGAGCCAGCCTTGTTTCGCGTATTAAAACCGGGCTG
GACTCCTGCCAGGATCTGAAATTGCCAATTAATGAACAGAGTATTGCCGGCTTCGTGGCTTTACACAGAAAAACTGTCAA
TTTCAGAGATGTTTATGATCGGAATGAACTCAGGAGACAGGGGGAATATCTGCGGTTTTTGCAGGAAGTGGATAAACGAA
CAGGGTACCGGACCAAACAGATGCTCGTGGTGCCGATCCCGAGTGCTGGTGATAATGATTTGCTGGGTGTAGTACAGCTC
ATTAACAATAAGTCTGGCGAGCCTTTTTCACAGAAGACAGTTGATAGTTTGGGTGAAATTTGCCAGGTGCTGGCGGCTGC
CTTTAAGCAGCACCGGATGCAGCAGCTGTTGGGCAAGACCCGTTATGATCAGCTGATCGTCAATGCTGTGATCAGCACCA
GTGAGTTTGAGCTGGCGACCAGACGGGCACGCGAAACAGGCCGTGATCTGGAAGATGTGTTGATTGATGAATTTGGTATC
AGCGTCATACAGATAGGCGAAGCTTTGGCCAGCTTCTTCGGTGTGAAATATGAAGGTTACAGGGCGGATCGGATCAGGCC
GCTGGATCTGCTGAAAAATCTCAAACGGGAGTTTGTCGAAAGCAATAGCTGGTTGCCGATAGATGATGGAAATGATGGAT
TGGTAGTGCTGACGCTGGATCCCGAGCGTATCAAGGCCTTGCGTATCGTCAATCAGATTTTTCCAAAGCGTAAAATCATC
TATACGGTTTGTACCCAGCGTGAATTCAAGGCTACGCTGGATGTATTTTATGGTGCCACAGAAGCTGAAAATCTGGGGGG
CAGCATTGACGATATGCTCTCCAATCTGGAAGAGGTCGTGGAAGAAACCAGGGAAGCTGAAACAGATGAAGCCTCGGCCG
CTGCAGACAACGAGCTGGTCAAACTGGTGAATCGCATTATCATGGACGCCTATAAAATGGGGGTTTCAGATATCCATATT
GAACCCTTGCCCGGAAAGGGAAAAACCAGTGTCCGCTTCCGCAAGGACGGTGCACTGATGCCTTACATCGAAATTCCCGC
CAGTTACCGCAATCCGTTAGTGACACGTCTCAAGATCATGTGTGATCTGGATATCTCAGAAAAACGTAAACCGCAGGATG
GCAAGATTAAGTTCCGGAAATTTGCGCCGCTCGATATTGAGCTGCGGGTTGCAACCATTCCTTCAGCCGGTGGCGTGGAA
GATGTCGTGATGCGTATTTTGGCGGCGGGTGAGCCGATTCCACTGGAAAAAATGGGATTTACTCCTGCCAATCTGGAGCA
ATTGAAATCAATTATCAGTAAACCCTACGGATTATTTTTTGTTTGCGGGCCGACTGGTTCTGGTAAAACAACAACACTAC
ATTCCATTCTCAAATATCTGAACCGGCCGGAAACCAAAATCTGGACGGCGGAAGATCCGGTTGAAATCACGCAAAAAGGA
TTGCGTCAGGTACAAATCAACACCAAGGCCGGTCTGACCTTTGCCACCATCATGAAATCTTTTCTGCGAGCAGATCCGGA
TATCATCATGGTAGGCGAGATGCGTGATAAGGAAACGACCGGGATCGGTATCGAAGCCTCGCTTACCGGGCATCTGGTAT
TTGCCACGTTACATACCAACAGTGCGCCGGAATCCATCATCCGCTTGCTGGATATGGGGATGGATCCATTCAATTTTTCA
GATGCATTACTGGGGATTCTGGCGCAACGTCTGGCCAGGCGGTTGTGTAAATGCAAAAAAGCACACGCGGCCAGCCGGGA
GGAAATTCGTGCGTTACTGACAGAGTATTGTGAGGAACTGAAAAACATTGAGCACTTCAAGGCTGATCCTGATGCAGCCT
ATCGTGAAATTGAAGCCCGCTGGATCCAACAATATGGGGATGAAAAAGGGCAGATTACGTTGTATCAGCCGGCCGGTTGT
GAGCATTGCACGGGAACCGGTTATGCGGGCCGGGTCGGTTTGCACGAGCTACTGACAGCTACTGATGCACTCAAAAAAAA
TGTACAGGAACACGCGCGTGTTGCTGAAATGCTGGCTACCGCGCTGGGTGACGGCATGCGTACCCTGAAACAGGACGGGA
TAGAAAAAGTGCTGCAGGGAATTACCGATATTCATCAGGTACGTGCGGTATGTATCAAATAA

Upstream 100 bases:

>100_bases
GGCGGAAGTGGCCATGCGCGAGATTCTTGCGGGCGTTACGCGTTTCAGCCCCCGCAGATTGATGAGTAATCAGATATTTG
AATTTTAGGATAGTGTAAAC

Downstream 100 bases:

>100_bases
AGGATATCTCTAATATCCTGCCAGATGTTTATAAAAACATCTGATCGGTTGTATGGTTGAATACCAGCATGGTTTTCCTT
TAATTCCTTCTTTTGCTCTA

Product: putative GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 793; Mature: 792

Protein sequence:

>793_residues
MSTSQVFQAGSGIVPAAGISLNSANRLRSVIDRIHAAGNIDEIMFEVSRDICEVFNADRLTIYTVSGDRASLVSRIKTGL
DSCQDLKLPINEQSIAGFVALHRKTVNFRDVYDRNELRRQGEYLRFLQEVDKRTGYRTKQMLVVPIPSAGDNDLLGVVQL
INNKSGEPFSQKTVDSLGEICQVLAAAFKQHRMQQLLGKTRYDQLIVNAVISTSEFELATRRARETGRDLEDVLIDEFGI
SVIQIGEALASFFGVKYEGYRADRIRPLDLLKNLKREFVESNSWLPIDDGNDGLVVLTLDPERIKALRIVNQIFPKRKII
YTVCTQREFKATLDVFYGATEAENLGGSIDDMLSNLEEVVEETREAETDEASAAADNELVKLVNRIIMDAYKMGVSDIHI
EPLPGKGKTSVRFRKDGALMPYIEIPASYRNPLVTRLKIMCDLDISEKRKPQDGKIKFRKFAPLDIELRVATIPSAGGVE
DVVMRILAAGEPIPLEKMGFTPANLEQLKSIISKPYGLFFVCGPTGSGKTTTLHSILKYLNRPETKIWTAEDPVEITQKG
LRQVQINTKAGLTFATIMKSFLRADPDIIMVGEMRDKETTGIGIEASLTGHLVFATLHTNSAPESIIRLLDMGMDPFNFS
DALLGILAQRLARRLCKCKKAHAASREEIRALLTEYCEELKNIEHFKADPDAAYREIEARWIQQYGDEKGQITLYQPAGC
EHCTGTGYAGRVGLHELLTATDALKKNVQEHARVAEMLATALGDGMRTLKQDGIEKVLQGITDIHQVRAVCIK

Sequences:

>Translated_793_residues
MSTSQVFQAGSGIVPAAGISLNSANRLRSVIDRIHAAGNIDEIMFEVSRDICEVFNADRLTIYTVSGDRASLVSRIKTGL
DSCQDLKLPINEQSIAGFVALHRKTVNFRDVYDRNELRRQGEYLRFLQEVDKRTGYRTKQMLVVPIPSAGDNDLLGVVQL
INNKSGEPFSQKTVDSLGEICQVLAAAFKQHRMQQLLGKTRYDQLIVNAVISTSEFELATRRARETGRDLEDVLIDEFGI
SVIQIGEALASFFGVKYEGYRADRIRPLDLLKNLKREFVESNSWLPIDDGNDGLVVLTLDPERIKALRIVNQIFPKRKII
YTVCTQREFKATLDVFYGATEAENLGGSIDDMLSNLEEVVEETREAETDEASAAADNELVKLVNRIIMDAYKMGVSDIHI
EPLPGKGKTSVRFRKDGALMPYIEIPASYRNPLVTRLKIMCDLDISEKRKPQDGKIKFRKFAPLDIELRVATIPSAGGVE
DVVMRILAAGEPIPLEKMGFTPANLEQLKSIISKPYGLFFVCGPTGSGKTTTLHSILKYLNRPETKIWTAEDPVEITQKG
LRQVQINTKAGLTFATIMKSFLRADPDIIMVGEMRDKETTGIGIEASLTGHLVFATLHTNSAPESIIRLLDMGMDPFNFS
DALLGILAQRLARRLCKCKKAHAASREEIRALLTEYCEELKNIEHFKADPDAAYREIEARWIQQYGDEKGQITLYQPAGC
EHCTGTGYAGRVGLHELLTATDALKKNVQEHARVAEMLATALGDGMRTLKQDGIEKVLQGITDIHQVRAVCIK
>Mature_792_residues
STSQVFQAGSGIVPAAGISLNSANRLRSVIDRIHAAGNIDEIMFEVSRDICEVFNADRLTIYTVSGDRASLVSRIKTGLD
SCQDLKLPINEQSIAGFVALHRKTVNFRDVYDRNELRRQGEYLRFLQEVDKRTGYRTKQMLVVPIPSAGDNDLLGVVQLI
NNKSGEPFSQKTVDSLGEICQVLAAAFKQHRMQQLLGKTRYDQLIVNAVISTSEFELATRRARETGRDLEDVLIDEFGIS
VIQIGEALASFFGVKYEGYRADRIRPLDLLKNLKREFVESNSWLPIDDGNDGLVVLTLDPERIKALRIVNQIFPKRKIIY
TVCTQREFKATLDVFYGATEAENLGGSIDDMLSNLEEVVEETREAETDEASAAADNELVKLVNRIIMDAYKMGVSDIHIE
PLPGKGKTSVRFRKDGALMPYIEIPASYRNPLVTRLKIMCDLDISEKRKPQDGKIKFRKFAPLDIELRVATIPSAGGVED
VVMRILAAGEPIPLEKMGFTPANLEQLKSIISKPYGLFFVCGPTGSGKTTTLHSILKYLNRPETKIWTAEDPVEITQKGL
RQVQINTKAGLTFATIMKSFLRADPDIIMVGEMRDKETTGIGIEASLTGHLVFATLHTNSAPESIIRLLDMGMDPFNFSD
ALLGILAQRLARRLCKCKKAHAASREEIRALLTEYCEELKNIEHFKADPDAAYREIEARWIQQYGDEKGQITLYQPAGCE
HCTGTGYAGRVGLHELLTATDALKKNVQEHARVAEMLATALGDGMRTLKQDGIEKVLQGITDIHQVRAVCIK

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=477, Percent_Identity=37.7358490566038, Blast_Score=291, Evalue=2e-79,
Organism=Escherichia coli, GI1786296, Length=404, Percent_Identity=37.6237623762376, Blast_Score=251, Evalue=9e-68,
Organism=Escherichia coli, GI87082188, Length=210, Percent_Identity=36.1904761904762, Blast_Score=108, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013374
- InterPro:   IPR007831
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 88354; Mature: 88223

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSQVFQAGSGIVPAAGISLNSANRLRSVIDRIHAAGNIDEIMFEVSRDICEVFNADRL
CCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCE
TIYTVSGDRASLVSRIKTGLDSCQDLKLPINEQSIAGFVALHRKTVNFRDVYDRNELRRQ
EEEEECCCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GEYLRFLQEVDKRTGYRTKQMLVVPIPSAGDNDLLGVVQLINNKSGEPFSQKTVDSLGEI
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
CQVLAAAFKQHRMQQLLGKTRYDQLIVNAVISTSEFELATRRARETGRDLEDVLIDEFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCH
SVIQIGEALASFFGVKYEGYRADRIRPLDLLKNLKREFVESNSWLPIDDGNDGLVVLTLD
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEC
PERIKALRIVNQIFPKRKIIYTVCTQREFKATLDVFYGATEAENLGGSIDDMLSNLEEVV
HHHHHHHHHHHHHCCCHHEEEHHHCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHH
EETREAETDEASAAADNELVKLVNRIIMDAYKMGVSDIHIEPLPGKGKTSVRFRKDGALM
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCC
PYIEIPASYRNPLVTRLKIMCDLDISEKRKPQDGKIKFRKFAPLDIELRVATIPSAGGVE
CEEECCCHHCCHHHHHHHHHCCCCCHHCCCCCCCCEEEEEECCCEEEEEEEECCCCCCHH
DVVMRILAAGEPIPLEKMGFTPANLEQLKSIISKPYGLFFVCGPTGSGKTTTLHSILKYL
HHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
NRPETKIWTAEDPVEITQKGLRQVQINTKAGLTFATIMKSFLRADPDIIMVGEMRDKETT
CCCCCEEECCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC
GIGIEASLTGHLVFATLHTNSAPESIIRLLDMGMDPFNFSDALLGILAQRLARRLCKCKK
CCCEEEEECCEEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AHAASREEIRALLTEYCEELKNIEHFKADPDAAYREIEARWIQQYGDEKGQITLYQPAGC
HHCCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
EHCTGTGYAGRVGLHELLTATDALKKNVQEHARVAEMLATALGDGMRTLKQDGIEKVLQG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITDIHQVRAVCIK
HHHHHHHHHHHCC
>Mature Secondary Structure 
STSQVFQAGSGIVPAAGISLNSANRLRSVIDRIHAAGNIDEIMFEVSRDICEVFNADRL
CCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCE
TIYTVSGDRASLVSRIKTGLDSCQDLKLPINEQSIAGFVALHRKTVNFRDVYDRNELRRQ
EEEEECCCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GEYLRFLQEVDKRTGYRTKQMLVVPIPSAGDNDLLGVVQLINNKSGEPFSQKTVDSLGEI
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
CQVLAAAFKQHRMQQLLGKTRYDQLIVNAVISTSEFELATRRARETGRDLEDVLIDEFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCH
SVIQIGEALASFFGVKYEGYRADRIRPLDLLKNLKREFVESNSWLPIDDGNDGLVVLTLD
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEC
PERIKALRIVNQIFPKRKIIYTVCTQREFKATLDVFYGATEAENLGGSIDDMLSNLEEVV
HHHHHHHHHHHHHCCCHHEEEHHHCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHH
EETREAETDEASAAADNELVKLVNRIIMDAYKMGVSDIHIEPLPGKGKTSVRFRKDGALM
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCC
PYIEIPASYRNPLVTRLKIMCDLDISEKRKPQDGKIKFRKFAPLDIELRVATIPSAGGVE
CEEECCCHHCCHHHHHHHHHCCCCCHHCCCCCCCCEEEEEECCCEEEEEEEECCCCCCHH
DVVMRILAAGEPIPLEKMGFTPANLEQLKSIISKPYGLFFVCGPTGSGKTTTLHSILKYL
HHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
NRPETKIWTAEDPVEITQKGLRQVQINTKAGLTFATIMKSFLRADPDIIMVGEMRDKETT
CCCCCEEECCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC
GIGIEASLTGHLVFATLHTNSAPESIIRLLDMGMDPFNFSDALLGILAQRLARRLCKCKK
CCCEEEEECCEEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AHAASREEIRALLTEYCEELKNIEHFKADPDAAYREIEARWIQQYGDEKGQITLYQPAGC
HHCCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
EHCTGTGYAGRVGLHELLTATDALKKNVQEHARVAEMLATALGDGMRTLKQDGIEKVLQG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITDIHQVRAVCIK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]