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The map label for this gene is atpD2

Identifier: 114331979

GI number: 114331979

Start: 2128968

End: 2130425

Strand: Direct

Name: atpD2

Synonym: Neut_2013

Alternate gene names: 114331979

Gene position: 2128968-2130425 (Clockwise)

Preceding gene: 114331978

Following gene: 114331980

Centisome position: 80.0

GC content: 51.51

Gene sequence:

>1458_bases
ATGAGTGGTATGGGTGAGAAATCAGAGCAAATATCAAAATCAGCCCGTTCAACAGATCCCCAAGAGCAAGAGTCTGTTGC
TCTTGCATCGCAGTGTGTTGGCGAGGGGCGTGTACTCAAGATTCGCGGGGGGGTAGTGGATGTCTTTTTTACAGAGCATA
TTCCACGTATCCACGACTTGGTTTATGCCGGCGATTTAGCGATGGAAGTTGCTGCTCTGTTAGATCAAGGTACCGTACGC
TGTATAGCGTTAACACCAGTGCGCGGTCTGGGTTTAGGTATGCCGGTACACGCAACCGGAGCACCGATTCAAGTGCCAGT
TGGTGAAGCGGTACTGGGACGTATGCTCAATGTCTTTGGCGAACCCATTGATGGAAAACCCGCACCAAATGCTACAATTT
CCCGTTCCATCCACCAAGCCCCGCCAGTATTAGAAGAGCGTGTGGTGCACAGCACCATCCTCGAAACCGGGATTAAAGCC
ATTGATTTACTCTCACCAATTGAGCGTGGAGGTAAAACAGGATTATTTGGTGGCGCTGGAGTGGGCAAAACGGTTTTGAT
TACTGAGCTAATTAATAACACCGCGCAACATCACAAAGGCGTCAGTCTGTTTTGTGGGATTGGAGAGCGCTCGCGTGAAG
CAGAAGAGCTGTACCGAGAAATGGGCGAAGCTGGCGTGCGCGATAAAACCGTGATGCTATTTGGGCAGATGAGTGAAGCT
CCCGGCGTACGTTTTTTAGTCGGTAAAACAGCACTGACCATGGCTGAGTATTTTCGCGATGATCTAGGGCAGGATGTGTT
GCTGCTTATCGATAACGTGTTTCGCTTTGTGCAGGCGGGCTCTGAAGTTTCAGGTTTATTAGGACGGATGCCATCGCGGG
TGGGTTATCAGCCGACCTTGGCCACTGAGTTGGCTTCGTTGCAAGAGCGTATTACCTCGACCCGTAAAGGTGCGATTACC
TCGATTCAAGCGGTGTACGTGCCGGCAGATGACTTTACTGACCCCGCCGCGGCGCATATTTTCTCGCATCTGTCGGCTTC
AGTAGTGTTGTCGCGTAAGCGTGCCAGTGAGGGCTTGTATCCGGCGGTTGACCCGTTAGCCTCCACCTCAGTGATGTTAA
CCCCAGCGGTGGTGGGTCAGCGCCATTATGATATTGCCCGCGCTGTACGCCGCACCCTTGCTGAATATGAAGAGCTGCGT
GACATTATTGCCATGTTAGGTTTAGAGGAGTTATCCGCAGCAGATCGCACGGTGGTGGCTCGAGCACGCCGTCTTGAGCG
TTTTTTAACCCAGCCGTTCTTTTCTGCTGAGTCTTTTAGCGGTGAGATAGGCGCACGGGTCTCGGTTGCCGAGACCTTAG
CCGGGTGTGAAAGAATCTTGCAGCAAACCAAATTTGCCGATGATGAAATAGATTATTACATGATTGGTGCTTTGCCCGAG
CAGAAGACTGCAGTATGA

Upstream 100 bases:

>100_bases
ATGCCCATGCGAAATTCAGCAGCGATAACATGTGCGACCATATGGGATACAGCACTTAAACAATAATAAGCGGACAGCAA
TAGTATTTATTAAGGGTAAG

Downstream 100 bases:

>100_bases
GCCAGGCTGAAGTGATGCATGTTAATCTACATTTGCCAACTCGCTTGCTGTTTGGCTGTGAAGCTAAGCAAGTATTTGCT
GAAGCTGAAAACGGTGCTTT

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta 2; F-ATPase subunit beta 2

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSGMGEKSEQISKSARSTDPQEQESVALASQCVGEGRVLKIRGGVVDVFFTEHIPRIHDLVYAGDLAMEVAALLDQGTVR
CIALTPVRGLGLGMPVHATGAPIQVPVGEAVLGRMLNVFGEPIDGKPAPNATISRSIHQAPPVLEERVVHSTILETGIKA
IDLLSPIERGGKTGLFGGAGVGKTVLITELINNTAQHHKGVSLFCGIGERSREAEELYREMGEAGVRDKTVMLFGQMSEA
PGVRFLVGKTALTMAEYFRDDLGQDVLLLIDNVFRFVQAGSEVSGLLGRMPSRVGYQPTLATELASLQERITSTRKGAIT
SIQAVYVPADDFTDPAAAHIFSHLSASVVLSRKRASEGLYPAVDPLASTSVMLTPAVVGQRHYDIARAVRRTLAEYEELR
DIIAMLGLEELSAADRTVVARARRLERFLTQPFFSAESFSGEIGARVSVAETLAGCERILQQTKFADDEIDYYMIGALPE
QKTAV

Sequences:

>Translated_485_residues
MSGMGEKSEQISKSARSTDPQEQESVALASQCVGEGRVLKIRGGVVDVFFTEHIPRIHDLVYAGDLAMEVAALLDQGTVR
CIALTPVRGLGLGMPVHATGAPIQVPVGEAVLGRMLNVFGEPIDGKPAPNATISRSIHQAPPVLEERVVHSTILETGIKA
IDLLSPIERGGKTGLFGGAGVGKTVLITELINNTAQHHKGVSLFCGIGERSREAEELYREMGEAGVRDKTVMLFGQMSEA
PGVRFLVGKTALTMAEYFRDDLGQDVLLLIDNVFRFVQAGSEVSGLLGRMPSRVGYQPTLATELASLQERITSTRKGAIT
SIQAVYVPADDFTDPAAAHIFSHLSASVVLSRKRASEGLYPAVDPLASTSVMLTPAVVGQRHYDIARAVRRTLAEYEELR
DIIAMLGLEELSAADRTVVARARRLERFLTQPFFSAESFSGEIGARVSVAETLAGCERILQQTKFADDEIDYYMIGALPE
QKTAV
>Mature_484_residues
SGMGEKSEQISKSARSTDPQEQESVALASQCVGEGRVLKIRGGVVDVFFTEHIPRIHDLVYAGDLAMEVAALLDQGTVRC
IALTPVRGLGLGMPVHATGAPIQVPVGEAVLGRMLNVFGEPIDGKPAPNATISRSIHQAPPVLEERVVHSTILETGIKAI
DLLSPIERGGKTGLFGGAGVGKTVLITELINNTAQHHKGVSLFCGIGERSREAEELYREMGEAGVRDKTVMLFGQMSEAP
GVRFLVGKTALTMAEYFRDDLGQDVLLLIDNVFRFVQAGSEVSGLLGRMPSRVGYQPTLATELASLQERITSTRKGAITS
IQAVYVPADDFTDPAAAHIFSHLSASVVLSRKRASEGLYPAVDPLASTSVMLTPAVVGQRHYDIARAVRRTLAEYEELRD
IIAMLGLEELSAADRTVVARARRLERFLTQPFFSAESFSGEIGARVSVAETLAGCERILQQTKFADDEIDYYMIGALPEQ
KTAV

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI32189394, Length=455, Percent_Identity=52.967032967033, Blast_Score=465, Evalue=1e-131,
Organism=Homo sapiens, GI50345984, Length=351, Percent_Identity=27.3504273504274, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI4757810, Length=351, Percent_Identity=27.3504273504274, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI19913424, Length=368, Percent_Identity=26.9021739130435, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI19913428, Length=352, Percent_Identity=25.8522727272727, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI19913426, Length=373, Percent_Identity=24.9329758713137, Blast_Score=107, Evalue=2e-23,
Organism=Escherichia coli, GI1790170, Length=450, Percent_Identity=53.5555555555556, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1788251, Length=362, Percent_Identity=32.0441988950276, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1790172, Length=397, Percent_Identity=27.2040302267003, Blast_Score=125, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI25144756, Length=464, Percent_Identity=53.6637931034483, Blast_Score=471, Evalue=1e-133,
Organism=Caenorhabditis elegans, GI71988080, Length=408, Percent_Identity=27.2058823529412, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71988063, Length=408, Percent_Identity=27.2058823529412, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17565854, Length=315, Percent_Identity=29.2063492063492, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17570191, Length=357, Percent_Identity=25.4901960784314, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17510931, Length=350, Percent_Identity=25.7142857142857, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71988074, Length=326, Percent_Identity=26.9938650306748, Blast_Score=100, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6322581, Length=453, Percent_Identity=53.6423841059603, Blast_Score=467, Evalue=1e-132,
Organism=Saccharomyces cerevisiae, GI6319370, Length=415, Percent_Identity=28.1927710843373, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6319603, Length=355, Percent_Identity=27.3239436619718, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6320016, Length=243, Percent_Identity=28.8065843621399, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24638766, Length=456, Percent_Identity=52.6315789473684, Blast_Score=468, Evalue=1e-132,
Organism=Drosophila melanogaster, GI28574560, Length=453, Percent_Identity=54.083885209713, Blast_Score=467, Evalue=1e-132,
Organism=Drosophila melanogaster, GI24658560, Length=407, Percent_Identity=27.2727272727273, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24583992, Length=368, Percent_Identity=26.9021739130435, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583988, Length=325, Percent_Identity=28.9230769230769, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583986, Length=325, Percent_Identity=28.9230769230769, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583984, Length=325, Percent_Identity=28.9230769230769, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI20129479, Length=314, Percent_Identity=28.6624203821656, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281361666, Length=353, Percent_Identity=25.4957507082153, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24646341, Length=353, Percent_Identity=25.4957507082153, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI17136796, Length=353, Percent_Identity=25.4957507082153, Blast_Score=109, Evalue=5e-24,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): ATPB2_NITEC (Q0AEJ6)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_748201.1
- ProteinModelPortal:   Q0AEJ6
- SMR:   Q0AEJ6
- STRING:   Q0AEJ6
- GeneID:   4273260
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_2013
- NMPDR:   fig|335283.3.peg.2474
- eggNOG:   COG0055
- HOGENOM:   HBG565875
- OMA:   AVHTFSH
- ProtClustDB:   PRK12597
- BioCyc:   NEUT335283:NEUT_2013-MONOMER
- HAMAP:   MF_01347
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100
- PANTHER:   PTHR15184:SF8
- SMART:   SM00382
- TIGRFAMs:   TIGR01039

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N; SSF47917 ATPase_a/b_C; SSF50615 ATPase_a/b_N

EC number: =3.6.3.14

Molecular weight: Translated: 52243; Mature: 52111

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMGEKSEQISKSARSTDPQEQESVALASQCVGEGRVLKIRGGVVDVFFTEHIPRIHDL
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCEEEEHHHHCCHHHHHH
VYAGDLAMEVAALLDQGTVRCIALTPVRGLGLGMPVHATGAPIQVPVGEAVLGRMLNVFG
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHC
EPIDGKPAPNATISRSIHQAPPVLEERVVHSTILETGIKAIDLLSPIERGGKTGLFGGAG
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VGKTVLITELINNTAQHHKGVSLFCGIGERSREAEELYREMGEAGVRDKTVMLFGQMSEA
CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC
PGVRFLVGKTALTMAEYFRDDLGQDVLLLIDNVFRFVQAGSEVSGLLGRMPSRVGYQPTL
CCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCCHH
ATELASLQERITSTRKGAITSIQAVYVPADDFTDPAAAHIFSHLSASVVLSRKRASEGLY
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PAVDPLASTSVMLTPAVVGQRHYDIARAVRRTLAEYEELRDIIAMLGLEELSAADRTVVA
CCCCCHHCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RARRLERFLTQPFFSAESFSGEIGARVSVAETLAGCERILQQTKFADDEIDYYMIGALPE
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
QKTAV
CCCCC
>Mature Secondary Structure 
SGMGEKSEQISKSARSTDPQEQESVALASQCVGEGRVLKIRGGVVDVFFTEHIPRIHDL
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCEEEEHHHHCCHHHHHH
VYAGDLAMEVAALLDQGTVRCIALTPVRGLGLGMPVHATGAPIQVPVGEAVLGRMLNVFG
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHC
EPIDGKPAPNATISRSIHQAPPVLEERVVHSTILETGIKAIDLLSPIERGGKTGLFGGAG
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VGKTVLITELINNTAQHHKGVSLFCGIGERSREAEELYREMGEAGVRDKTVMLFGQMSEA
CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC
PGVRFLVGKTALTMAEYFRDDLGQDVLLLIDNVFRFVQAGSEVSGLLGRMPSRVGYQPTL
CCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCCHH
ATELASLQERITSTRKGAITSIQAVYVPADDFTDPAAAHIFSHLSASVVLSRKRASEGLY
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PAVDPLASTSVMLTPAVVGQRHYDIARAVRRTLAEYEELRDIIAMLGLEELSAADRTVVA
CCCCCHHCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RARRLERFLTQPFFSAESFSGEIGARVSVAETLAGCERILQQTKFADDEIDYYMIGALPE
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
QKTAV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA