| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is eryA [H]
Identifier: 114331969
GI number: 114331969
Start: 2114880
End: 2116862
Strand: Reverse
Name: eryA [H]
Synonym: Neut_2003
Alternate gene names: 114331969
Gene position: 2116862-2114880 (Counterclockwise)
Preceding gene: 114331970
Following gene: 114331968
Centisome position: 79.55
GC content: 53.05
Gene sequence:
>1983_bases ATGACCTCAAAAGCGGTTGCAATTATTGGTATCGGCTTCCGATTCCCTGGTGATCTTGGTGACGAAACAGATTTCTGGAA TGCACTGAAGCAAAAACGTGATCTTGTAACCAGTATCCCGCCCGAGCGTTGGGCGATCAGTGAGCTTCAGCATGACAAAC GTTCCGAGCCTGGTCGCAGCATTACTTATTCAGCAGGCGTTCTGTCGCGTATCGATGAATTTGACGCGAGCTTCTTTGGT ATTTCTCCGCGCGAAGCAGCCTGGATGGACCCTCAACAGCGGCTTCTGCTCGAATTATCCTGGGAGGCCATGGAAAATGC AGGTATTCCGCCTTCATCCATGTCCGGTTCCAATTGTGCAGTCTATGTGGGTATTTCCGGCCTGGATTACGGCACGCGCG GACTGGATGATCTGGCGTCGCTCTCGCCCCACATGATGACCGGCAACACGCTCAGCATTGCCGCCAATCGTCTTTCCTAT GTTTTCAATCTGCATGGCCCTTCGCTGGCGGTTGACACGGCCTGTTCATCGTCGCTGGTTGCATTGCATCATGCTTGTCA GGCCCTGCAAACTGGTGAGGCAGGCACTGCGCTGGTGGGAGGGGTTAATTTATTGTTGCATCCCTATCCCTTCGTTGGTT TTACCAAAGCATCCATGCTGTCTGCTGATGGCCGCTGTAAGGCTTTCGATGCTTCCGGTAGTGGTTATGTACGTGCCGAA GGCGGGGCAGTCTTGCTGCTCAAGCCGTTTGAACAGGCGATTGCAGAGGGCGACGATATTCAGGCGGTGATCCTGGCCAC TGGTATCAATACGGATGGCGCACGCAAGGCTGGCATTACCATTCCCAGCCGTGATGGACAATCCGAGCTCATGATGAGCG TCCTCGCCAAAACCAGTCTGTCAGCACGAGACATCGATTTTATCGAAGCGCATGGCACAGGTACGGCGGTGGGAGATCCT GTTGAAACAGCAGCAATTGGTGAAGTCTATGGCAAAAAGCGCGAAAAACCTTTGCCGATCGGATCGGTCAAGGCCAATCT TGGACACATGGAACCGGCTTCCGGCATGGCAGGAATCATCAAGGCAATTCTGGCGCTCAAGCATCATGCTCTGCCACCAC AGATTCATCTGGAAACGCCCAATCCAAATATTGATTTTCTCGGCTTGAATCTGAGGCCGGTGACCGAGTATCTGGAACTG GCGAAAAAGAATAATCGAGCTCTGATTGCCGGTGTGAATTCCTTCGGCTTTGGTGGTGCCAATGCGCATGTGCTGCTGCA GGAATATCGTTGCCGTGATCTGGCAACGACGGAACCGCTACCGGCATCCTTGCCACCTCTTTTTCTGTCAGCCCGTTCCG AAACAGCACTAAAAGAGCTGGCGGGTCGTTATGCAGATCTGTTACACGATAAATCCGGGCAGGATTTCTATGACGTGGCA CATGCTGCTGTCAATCAGCGTGATCGTATGGAAAAACGGCTCGCGCTCCATTCCGGCTCTGTTGAATCGACAATTCATTT GCTGCAGCAATATGCGTTGGATAATGTTTCAGCGGATATCTTCATTGAGGATAGCCTGCCACAAAGTGGCGATGTGGCGT TTATCTATTCAGGTAACGGCGCGCAGTGGGCTGGTATGGGGCGTGCGCTGCTGACTGAATCCTCCCGGTTTGAAGAAATT CTTACGGAAATCGATATCGCCATGCGCCCCTTGACAGATTTTTCTCTGCTTGAGACGCTGCAATCCGAAAGTGAGCTTGC CAGGCTTAGTAACACAGCTGTCGCGCAGCCTCTGCTGTTCGCTATTCAGGTTGCAGTCACACTTCTACTGAGAGAGCAGG GGGTGACACCATCCGCTGTCGCCGGCCATAGCGTGGGTGAAATCGCCGCTGCCTGGGCGGCCGGTGCGCTGGATCTTGAA CCGCCCCGGGTTTTGAGGAGGCTCCACTATCTGAGAAGATGGAGCCATGAACAAATCAAATAA
Upstream 100 bases:
>100_bases AACTGATTCAAGTTTCAATAAGGGGATGGTGATCGCAATAAATCCGAAGAACTTCCCTGAGTTAACGTGAAGCGGATTGC ATGGATATTGATCTGGAGAT
Downstream 100 bases:
>100_bases ATATTCCCCCGAAGTAAGAGCGCGCGCAGTCCGTCTGGTGCAGGAACACCGCAGTGAGTATCCCTCGCTGTGGTCGACGA TTGAATCCATTGCGCCGAAG
Product: beta-ketoacyl synthase
Products: NA
Alternate protein names: 6-deoxyerythronolide B synthase II; DEBS 2; ORF 2 [H]
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MTSKAVAIIGIGFRFPGDLGDETDFWNALKQKRDLVTSIPPERWAISELQHDKRSEPGRSITYSAGVLSRIDEFDASFFG ISPREAAWMDPQQRLLLELSWEAMENAGIPPSSMSGSNCAVYVGISGLDYGTRGLDDLASLSPHMMTGNTLSIAANRLSY VFNLHGPSLAVDTACSSSLVALHHACQALQTGEAGTALVGGVNLLLHPYPFVGFTKASMLSADGRCKAFDASGSGYVRAE GGAVLLLKPFEQAIAEGDDIQAVILATGINTDGARKAGITIPSRDGQSELMMSVLAKTSLSARDIDFIEAHGTGTAVGDP VETAAIGEVYGKKREKPLPIGSVKANLGHMEPASGMAGIIKAILALKHHALPPQIHLETPNPNIDFLGLNLRPVTEYLEL AKKNNRALIAGVNSFGFGGANAHVLLQEYRCRDLATTEPLPASLPPLFLSARSETALKELAGRYADLLHDKSGQDFYDVA HAAVNQRDRMEKRLALHSGSVESTIHLLQQYALDNVSADIFIEDSLPQSGDVAFIYSGNGAQWAGMGRALLTESSRFEEI LTEIDIAMRPLTDFSLLETLQSESELARLSNTAVAQPLLFAIQVAVTLLLREQGVTPSAVAGHSVGEIAAAWAAGALDLE PPRVLRRLHYLRRWSHEQIK
Sequences:
>Translated_660_residues MTSKAVAIIGIGFRFPGDLGDETDFWNALKQKRDLVTSIPPERWAISELQHDKRSEPGRSITYSAGVLSRIDEFDASFFG ISPREAAWMDPQQRLLLELSWEAMENAGIPPSSMSGSNCAVYVGISGLDYGTRGLDDLASLSPHMMTGNTLSIAANRLSY VFNLHGPSLAVDTACSSSLVALHHACQALQTGEAGTALVGGVNLLLHPYPFVGFTKASMLSADGRCKAFDASGSGYVRAE GGAVLLLKPFEQAIAEGDDIQAVILATGINTDGARKAGITIPSRDGQSELMMSVLAKTSLSARDIDFIEAHGTGTAVGDP VETAAIGEVYGKKREKPLPIGSVKANLGHMEPASGMAGIIKAILALKHHALPPQIHLETPNPNIDFLGLNLRPVTEYLEL AKKNNRALIAGVNSFGFGGANAHVLLQEYRCRDLATTEPLPASLPPLFLSARSETALKELAGRYADLLHDKSGQDFYDVA HAAVNQRDRMEKRLALHSGSVESTIHLLQQYALDNVSADIFIEDSLPQSGDVAFIYSGNGAQWAGMGRALLTESSRFEEI LTEIDIAMRPLTDFSLLETLQSESELARLSNTAVAQPLLFAIQVAVTLLLREQGVTPSAVAGHSVGEIAAAWAAGALDLE PPRVLRRLHYLRRWSHEQIK >Mature_659_residues TSKAVAIIGIGFRFPGDLGDETDFWNALKQKRDLVTSIPPERWAISELQHDKRSEPGRSITYSAGVLSRIDEFDASFFGI SPREAAWMDPQQRLLLELSWEAMENAGIPPSSMSGSNCAVYVGISGLDYGTRGLDDLASLSPHMMTGNTLSIAANRLSYV FNLHGPSLAVDTACSSSLVALHHACQALQTGEAGTALVGGVNLLLHPYPFVGFTKASMLSADGRCKAFDASGSGYVRAEG GAVLLLKPFEQAIAEGDDIQAVILATGINTDGARKAGITIPSRDGQSELMMSVLAKTSLSARDIDFIEAHGTGTAVGDPV ETAAIGEVYGKKREKPLPIGSVKANLGHMEPASGMAGIIKAILALKHHALPPQIHLETPNPNIDFLGLNLRPVTEYLELA KKNNRALIAGVNSFGFGGANAHVLLQEYRCRDLATTEPLPASLPPLFLSARSETALKELAGRYADLLHDKSGQDFYDVAH AAVNQRDRMEKRLALHSGSVESTIHLLQQYALDNVSADIFIEDSLPQSGDVAFIYSGNGAQWAGMGRALLTESSRFEEIL TEIDIAMRPLTDFSLLETLQSESELARLSNTAVAQPLLFAIQVAVTLLLREQGVTPSAVAGHSVGEIAAAWAAGALDLEP PRVLRRLHYLRRWSHEQIK
Specific function: Catalyzes The Condensation Reaction Of Fatty Acid Synthesis By The Addition To An Acyl Acceptor Of Two Carbons From Malonyl-Acp. Has A Preference For Short Chain Acid Substrates And May Function To Supply The Octanoic Substrates For Lipoic Acid Biosynthe
COG id: COG3321
COG function: function code Q; Polyketide synthase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI41872631, Length=644, Percent_Identity=35.8695652173913, Blast_Score=342, Evalue=7e-94, Organism=Homo sapiens, GI8923559, Length=307, Percent_Identity=29.9674267100977, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI310129082, Length=117, Percent_Identity=36.7521367521368, Blast_Score=84, Evalue=6e-16, Organism=Homo sapiens, GI310109937, Length=117, Percent_Identity=36.7521367521368, Blast_Score=84, Evalue=6e-16, Organism=Homo sapiens, GI239744023, Length=115, Percent_Identity=37.3913043478261, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI223972627, Length=150, Percent_Identity=32, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI1787337, Length=299, Percent_Identity=28.4280936454849, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1788663, Length=306, Percent_Identity=30.0653594771242, Blast_Score=111, Evalue=1e-25, Organism=Caenorhabditis elegans, GI212642053, Length=666, Percent_Identity=34.0840840840841, Blast_Score=328, Evalue=7e-90, Organism=Caenorhabditis elegans, GI17550940, Length=422, Percent_Identity=34.8341232227488, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI71983541, Length=293, Percent_Identity=27.6450511945392, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71983535, Length=270, Percent_Identity=28.8888888888889, Blast_Score=110, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320904, Length=357, Percent_Identity=27.1708683473389, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI221330659, Length=648, Percent_Identity=34.8765432098765, Blast_Score=330, Evalue=2e-90, Organism=Drosophila melanogaster, GI19920632, Length=585, Percent_Identity=36.0683760683761, Blast_Score=329, Evalue=3e-90, Organism=Drosophila melanogaster, GI24581345, Length=650, Percent_Identity=33.3846153846154, Blast_Score=307, Evalue=1e-83, Organism=Drosophila melanogaster, GI24644341, Length=361, Percent_Identity=30.4709141274238, Blast_Score=131, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR002198 - InterPro: IPR015357 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR020806 - InterPro: IPR015083 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00106 adh_short; PF00107 ADH_zinc_N; PF08990 Docking; PF09277 Erythro-docking; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF00550 PP-binding [H]
EC number: =2.3.1.94 [H]
Molecular weight: Translated: 70874; Mature: 70743
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKAVAIIGIGFRFPGDLGDETDFWNALKQKRDLVTSIPPERWAISELQHDKRSEPGRS CCCCEEEEEEECEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCE ITYSAGVLSRIDEFDASFFGISPREAAWMDPQQRLLLELSWEAMENAGIPPSSMSGSNCA EEEHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCE VYVGISGLDYGTRGLDDLASLSPHMMTGNTLSIAANRLSYVFNLHGPSLAVDTACSSSLV EEEEECCCCCCCCCHHHHHHCCCCEECCCCHHHHHHCEEEEEEECCCCEEEHHHCCHHHH ALHHACQALQTGEAGTALVGGVNLLLHPYPFVGFTKASMLSADGRCKAFDASGSGYVRAE HHHHHHHHHHCCCCCCCHHCCCEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCEEEEC GGAVLLLKPFEQAIAEGDDIQAVILATGINTDGARKAGITIPSRDGQSELMMSVLAKTSL CCEEEEECCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC SARDIDFIEAHGTGTAVGDPVETAAIGEVYGKKREKPLPIGSVKANLGHMEPASGMAGII CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHH KAILALKHHALPPQIHLETPNPNIDFLGLNLRPVTEYLELAKKNNRALIAGVNSFGFGGA HHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC NAHVLLQEYRCRDLATTEPLPASLPPLFLSARSETALKELAGRYADLLHDKSGQDFYDVA CHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH HAAVNQRDRMEKRLALHSGSVESTIHLLQQYALDNVSADIFIEDSLPQSGDVAFIYSGNG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCC AQWAGMGRALLTESSRFEEILTEIDIAMRPLTDFSLLETLQSESELARLSNTAVAQPLLF CEECCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIQVAVTLLLREQGVTPSAVAGHSVGEIAAAWAAGALDLEPPRVLRRLHYLRRWSHEQIK HHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure TSKAVAIIGIGFRFPGDLGDETDFWNALKQKRDLVTSIPPERWAISELQHDKRSEPGRS CCCEEEEEEECEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCE ITYSAGVLSRIDEFDASFFGISPREAAWMDPQQRLLLELSWEAMENAGIPPSSMSGSNCA EEEHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCE VYVGISGLDYGTRGLDDLASLSPHMMTGNTLSIAANRLSYVFNLHGPSLAVDTACSSSLV EEEEECCCCCCCCCHHHHHHCCCCEECCCCHHHHHHCEEEEEEECCCCEEEHHHCCHHHH ALHHACQALQTGEAGTALVGGVNLLLHPYPFVGFTKASMLSADGRCKAFDASGSGYVRAE HHHHHHHHHHCCCCCCCHHCCCEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCEEEEC GGAVLLLKPFEQAIAEGDDIQAVILATGINTDGARKAGITIPSRDGQSELMMSVLAKTSL CCEEEEECCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC SARDIDFIEAHGTGTAVGDPVETAAIGEVYGKKREKPLPIGSVKANLGHMEPASGMAGII CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHH KAILALKHHALPPQIHLETPNPNIDFLGLNLRPVTEYLELAKKNNRALIAGVNSFGFGGA HHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC NAHVLLQEYRCRDLATTEPLPASLPPLFLSARSETALKELAGRYADLLHDKSGQDFYDVA CHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH HAAVNQRDRMEKRLALHSGSVESTIHLLQQYALDNVSADIFIEDSLPQSGDVAFIYSGNG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCC AQWAGMGRALLTESSRFEEILTEIDIAMRPLTDFSLLETLQSESELARLSNTAVAQPLLF CEECCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIQVAVTLLLREQGVTPSAVAGHSVGEIAAAWAAGALDLEPPRVLRRLHYLRRWSHEQIK HHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2024119; 1740151 [H]