| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is rmlA1 [H]
Identifier: 114331855
GI number: 114331855
Start: 1994543
End: 1995430
Strand: Reverse
Name: rmlA1 [H]
Synonym: Neut_1880
Alternate gene names: 114331855
Gene position: 1995430-1994543 (Counterclockwise)
Preceding gene: 114331860
Following gene: 114331854
Centisome position: 74.99
GC content: 50.9
Gene sequence:
>888_bases ATGACAAATAGAAAAGGTATTATTCTTGCTGGCGGTTCCGGTACGCGGCTGCACCCGGCCACGCTTGCGCTGAGCAAACA ATTATTGCCGGTATTTGATAAACCGATGATCTATTACCCGCTCAGCACCCTGATGCTGGCAGGTATTCGCGACATACTCA TCATCAGCACGCCGCAGGATACCCCCCGTTTTCAGCAATTGCTGGGCAGTGGTGAGCAATGGGGATTGAATCTGCAATAT GCGGTACAGCCTGCACCGGATGGTCTCGCACAAGCTTTTCTGATCGGAGAAGCGTTTATTGGCAATCACCCTTCTGCACT GGTGCTGGGTGACAATATTTTCTACGGCCATGATTTGCAGCAATTACTGGCCAATGCCATGGCGCGCACGGAGGGAGCCA GTGTGTTTGCTTACCATGTGCTTGATCCTGAGCGCTATGGCGTGGTTGAGTTTGATGCATGCGGGAAGGCGCTGTTACTG GAAGAAAAACCCAGGCAGCCTAAATCCAACTATGCAGTAACCGGTCTGTATTTCTACGATGACCGGGTTACCAATTTTGC TAAAACGCTTAAGCCCTCGGCACGTGGAGAGCTGGAAATTACCGACCTGAATCGCCTATATCTGGAACAAGATCAGTTAA GTGTGGAAATCATGGGCCGGGGTTACGCCTGGCTGGATACAGGAACACATGCAACTCTGCTCGATGCCAGCCAGTTCATC GCCACTCTGGAAAACCGACAAGGACTTAAAGTGGCCTGCCCGGAGGAAATCGCTTACCGGCAACGATGGATTGATGCGGC ACAGCTGGAAATGCTGGCCCAGCCACTGGCCAAAAATGGTTATGGCCAGTATCTGCTTAAAATACTTAGGGAAAACGTAT TTAGATGA
Upstream 100 bases:
>100_bases GTATAACAGTCCGTATTTTATGGACTAGTTCTATCTGCAAGAATTCACATGTTCCTTGATTCTTCAATTTCATTTTTCTG CGGATTGCCAGAAAATCATT
Downstream 100 bases:
>100_bases AAACAAGCTTTGCTTGCGCGGCGGCAGCAGTGATTGCTTAATCTGGTATTTATTCAGATCTGATAAGGTGTTGATATGAA GGTTCTTGTTACTGGAGGAG
Product: glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: G1P-TT 1; dTDP-glucose pyrophosphorylase 1; dTDP-glucose synthase 1 [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTNRKGIILAGGSGTRLHPATLALSKQLLPVFDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGSGEQWGLNLQY AVQPAPDGLAQAFLIGEAFIGNHPSALVLGDNIFYGHDLQQLLANAMARTEGASVFAYHVLDPERYGVVEFDACGKALLL EEKPRQPKSNYAVTGLYFYDDRVTNFAKTLKPSARGELEITDLNRLYLEQDQLSVEIMGRGYAWLDTGTHATLLDASQFI ATLENRQGLKVACPEEIAYRQRWIDAAQLEMLAQPLAKNGYGQYLLKILRENVFR
Sequences:
>Translated_295_residues MTNRKGIILAGGSGTRLHPATLALSKQLLPVFDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGSGEQWGLNLQY AVQPAPDGLAQAFLIGEAFIGNHPSALVLGDNIFYGHDLQQLLANAMARTEGASVFAYHVLDPERYGVVEFDACGKALLL EEKPRQPKSNYAVTGLYFYDDRVTNFAKTLKPSARGELEITDLNRLYLEQDQLSVEIMGRGYAWLDTGTHATLLDASQFI ATLENRQGLKVACPEEIAYRQRWIDAAQLEMLAQPLAKNGYGQYLLKILRENVFR >Mature_294_residues TNRKGIILAGGSGTRLHPATLALSKQLLPVFDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGSGEQWGLNLQYA VQPAPDGLAQAFLIGEAFIGNHPSALVLGDNIFYGHDLQQLLANAMARTEGASVFAYHVLDPERYGVVEFDACGKALLLE EKPRQPKSNYAVTGLYFYDDRVTNFAKTLKPSARGELEITDLNRLYLEQDQLSVEIMGRGYAWLDTGTHATLLDASQFIA TLENRQGLKVACPEEIAYRQRWIDAAQLEMLAQPLAKNGYGQYLLKILRENVFR
Specific function: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis [H]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788351, Length=292, Percent_Identity=74.3150684931507, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1790224, Length=286, Percent_Identity=64.6853146853147, Blast_Score=397, Evalue=1e-112, Organism=Caenorhabditis elegans, GI133931050, Length=191, Percent_Identity=25.130890052356, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320148, Length=252, Percent_Identity=26.984126984127, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI21355443, Length=249, Percent_Identity=23.2931726907631, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24644084, Length=249, Percent_Identity=23.2931726907631, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005907 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.24 [H]
Molecular weight: Translated: 32849; Mature: 32718
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRKGIILAGGSGTRLHPATLALSKQLLPVFDKPMIYYPLSTLMLAGIRDILIISTPQD CCCCCEEEEECCCCCEECHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCEEEEEECCCC TPRFQQLLGSGEQWGLNLQYAVQPAPDGLAQAFLIGEAFIGNHPSALVLGDNIFYGHDLQ CHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCEEECCCHH QLLANAMARTEGASVFAYHVLDPERYGVVEFDACGKALLLEEKPRQPKSNYAVTGLYFYD HHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCEEEEEEEEEC DRVTNFAKTLKPSARGELEITDLNRLYLEQDQLSVEIMGRGYAWLDTGTHATLLDASQFI CHHHHHHHHCCCCCCCCEEEEECHHEEEECCCEEEEEEECCEEEEECCCCEEEHHHHHHH ATLENRQGLKVACPEEIAYRQRWIDAAQLEMLAQPLAKNGYGQYLLKILRENVFR HHHHCCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TNRKGIILAGGSGTRLHPATLALSKQLLPVFDKPMIYYPLSTLMLAGIRDILIISTPQD CCCCEEEEECCCCCEECHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCEEEEEECCCC TPRFQQLLGSGEQWGLNLQYAVQPAPDGLAQAFLIGEAFIGNHPSALVLGDNIFYGHDLQ CHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCEEECCCHH QLLANAMARTEGASVFAYHVLDPERYGVVEFDACGKALLLEEKPRQPKSNYAVTGLYFYD HHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCEEEEEEEEEC DRVTNFAKTLKPSARGELEITDLNRLYLEQDQLSVEIMGRGYAWLDTGTHATLLDASQFI CHHHHHHHHCCCCCCCCEEEEECHHEEEECCCEEEEEEECCEEEEECCCCEEEHHHHHHH ATLENRQGLKVACPEEIAYRQRWIDAAQLEMLAQPLAKNGYGQYLLKILRENVFR HHHHCCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7517391; 9097040; 9278503; 7517390 [H]