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The map label for this gene is pilA [H]

Identifier: 114331818

GI number: 114331818

Start: 1952523

End: 1952930

Strand: Reverse

Name: pilA [H]

Synonym: Neut_1842

Alternate gene names: 114331818

Gene position: 1952930-1952523 (Counterclockwise)

Preceding gene: 114331819

Following gene: 114331817

Centisome position: 73.39

GC content: 45.1

Gene sequence:

>408_bases
ATGCAACACAATCAACAAGGTTTTACTTTGATCGAATTGATGATCGTCGTCGCGATCATCGGCATCTTGGCGGCCGTGGC
GATTCCGGCTTATTCTGATTATCAGGCTAAAGCCAAGGTAACAGCCGGTCTTACTGAAATTGCAGCAGGAAAGACCGCAT
TTGAGAGTCGTGTCAATAACGGTGATACAGTTTCTGCAATTGGTGATGTTGGCCTCACAACTCCAACTAGCAACTGTAAT
ATTTCTGTTACAGATTCTACAATCGTATGCGAGCTTATCCATGCGCCATCTCAAGTTATCAGTAAAAAGATTACCCTGAC
GCGTGCGGCGGATACTGGTGTTTGGTCATGTGCAACCGATGCGAATAATAAATATGCTCCGAAGAGCTGTCCTGGTAACG
GTTCTTAA

Upstream 100 bases:

>100_bases
AAAAAACGATCGCCGTTATACTCCCCAGCAGTATTCATCAGCGCACCAAGCTGTAACCAGCGAATTCTATTTTATTTGTT
AACAAATGGAGAACCCAACC

Downstream 100 bases:

>100_bases
TCAGGTTTCCTAATTATTATCCAACAAAACCCTGCTTTGGCAGGGTTTTCTGTTTCTGGTGGTATGCAGATGACGATCTT
TTTCCGACGGATGGGTTAAA

Product: fimbrial protein pilin

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MQHNQQGFTLIELMIVVAIIGILAAVAIPAYSDYQAKAKVTAGLTEIAAGKTAFESRVNNGDTVSAIGDVGLTTPTSNCN
ISVTDSTIVCELIHAPSQVISKKITLTRAADTGVWSCATDANNKYAPKSCPGNGS

Sequences:

>Translated_135_residues
MQHNQQGFTLIELMIVVAIIGILAAVAIPAYSDYQAKAKVTAGLTEIAAGKTAFESRVNNGDTVSAIGDVGLTTPTSNCN
ISVTDSTIVCELIHAPSQVISKKITLTRAADTGVWSCATDANNKYAPKSCPGNGS
>Mature_135_residues
MQHNQQGFTLIELMIVVAIIGILAAVAIPAYSDYQAKAKVTAGLTEIAAGKTAFESRVNNGDTVSAIGDVGLTTPTSNCN
ISVTDSTIVCELIHAPSQVISKKITLTRAADTGVWSCATDANNKYAPKSCPGNGS

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 13970; Mature: 13970

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHNQQGFTLIELMIVVAIIGILAAVAIPAYSDYQAKAKVTAGLTEIAAGKTAFESRVNN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCC
GDTVSAIGDVGLTTPTSNCNISVTDSTIVCELIHAPSQVISKKITLTRAADTGVWSCATD
CCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEECC
ANNKYAPKSCPGNGS
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MQHNQQGFTLIELMIVVAIIGILAAVAIPAYSDYQAKAKVTAGLTEIAAGKTAFESRVNN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCC
GDTVSAIGDVGLTTPTSNCNISVTDSTIVCELIHAPSQVISKKITLTRAADTGVWSCATD
CCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEECC
ANNKYAPKSCPGNGS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]