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The map label for this gene is ppdD [C]

Identifier: 114331808

GI number: 114331808

Start: 1940647

End: 1941096

Strand: Reverse

Name: ppdD [C]

Synonym: Neut_1832

Alternate gene names: 114331808

Gene position: 1941096-1940647 (Counterclockwise)

Preceding gene: 114331809

Following gene: 114331804

Centisome position: 72.94

GC content: 50.67

Gene sequence:

>450_bases
ATGAACCTGGCTCGGATGTATACGAAAAATCACGGCTTTACGTTGATCGAGACGATGATCGTGGTGGCTATTATCGGCAT
TCTGGCAGCGATTGCCTATCCTTCCTACCAGGAGCATGTACGGCGGGGTAATCGGGTGGAGGTCAGCAGTATTCTGTTGG
AAATGGCACAATTGCTGGAACGCAATTACACTGAAGCTAATCGTTATGATCAGACTAGTGCGGGAGGCGATTTTGCATTG
CCGGTGACGCAATCACCGCGAACGGGTACGGCAAAATATACTATCCGGTTTGCAGAAGGCACTCCAACACAAAATAGTTA
TACGCTGGAGGCGGTGCCGACAGGTTCTATGGCAAGTGATACCTGCGGTACCTTGTCGTTGACTCATACAGGTGTGCGAG
GAGCAGGCGGAGTGACAGGAGCAGAAGCTATTGCCAAATGCTGGCAGTAA

Upstream 100 bases:

>100_bases
GGCAGTGGAGAAAGTGACGATCAGCAACGGCGCTCCGCCGCCGCGCCGATCCTGGAAACAGATACAGTAAACAGATACAG
TAAACAGGAGGACCAGTTAA

Downstream 100 bases:

>100_bases
ATAAGCTATCAGGCTGCACCCGATCGGGTGCGATGATGTTCAGTCAGGTTTTCAATACGCAGGTCAACATCAACTTTTGC
CCAGGTCTTGATTTCATTAT

Product: fimbrial protein pilin

Products: NA

Alternate protein names: Type IV Pilin; Tfp Pilus Assembly Protein PilE; Type IV Pilin PilE; Type 4 Fimbrial Biogenesis Protein PilE; Type IV Fimbrial Biogenesis Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNLARMYTKNHGFTLIETMIVVAIIGILAAIAYPSYQEHVRRGNRVEVSSILLEMAQLLERNYTEANRYDQTSAGGDFAL
PVTQSPRTGTAKYTIRFAEGTPTQNSYTLEAVPTGSMASDTCGTLSLTHTGVRGAGGVTGAEAIAKCWQ

Sequences:

>Translated_149_residues
MNLARMYTKNHGFTLIETMIVVAIIGILAAIAYPSYQEHVRRGNRVEVSSILLEMAQLLERNYTEANRYDQTSAGGDFAL
PVTQSPRTGTAKYTIRFAEGTPTQNSYTLEAVPTGSMASDTCGTLSLTHTGVRGAGGVTGAEAIAKCWQ
>Mature_149_residues
MNLARMYTKNHGFTLIETMIVVAIIGILAAIAYPSYQEHVRRGNRVEVSSILLEMAQLLERNYTEANRYDQTSAGGDFAL
PVTQSPRTGTAKYTIRFAEGTPTQNSYTLEAVPTGSMASDTCGTLSLTHTGVRGAGGVTGAEAIAKCWQ

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16064; Mature: 16064

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLARMYTKNHGFTLIETMIVVAIIGILAAIAYPSYQEHVRRGNRVEVSSILLEMAQLLE
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
RNYTEANRYDQTSAGGDFALPVTQSPRTGTAKYTIRFAEGTPTQNSYTLEAVPTGSMASD
CCCCHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCC
TCGTLSLTHTGVRGAGGVTGAEAIAKCWQ
CCCEEEEECCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNLARMYTKNHGFTLIETMIVVAIIGILAAIAYPSYQEHVRRGNRVEVSSILLEMAQLLE
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
RNYTEANRYDQTSAGGDFALPVTQSPRTGTAKYTIRFAEGTPTQNSYTLEAVPTGSMASD
CCCCHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCC
TCGTLSLTHTGVRGAGGVTGAEAIAKCWQ
CCCEEEEECCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA