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The map label for this gene is yjnA [H]

Identifier: 114331231

GI number: 114331231

Start: 1292064

End: 1292843

Strand: Direct

Name: yjnA [H]

Synonym: Neut_1235

Alternate gene names: 114331231

Gene position: 1292064-1292843 (Clockwise)

Preceding gene: 114331229

Following gene: 114331240

Centisome position: 48.55

GC content: 48.08

Gene sequence:

>780_bases
ATGATTGACTGGTCCTATGCGGCGGCCGGTACCTTCACTGGCTTTATTATCGGATTGACTGGTGTTGGTGGTGGTGCTCT
GATGACGCCCATCTTGCTACTGTTTTTCGGGATATCGCCAACAACCGCTGTCGCTACTGATTTATGGTTTGCCGCCATCA
CTAAAATAGCCGGTGCACGAATACATCATACCAACGGCAATGTGGATTGGCAGGTAGTCAAGCGTTTGTGGGCAGGCAGT
CTTCCGATGGCTTCACTGATCGTACTACTGATAAGTATGGGGACACATATCGTAAAGGTAGACTGGCTTACAAAAGGTAT
CGGTATAGTAGTGCTGGTTACAGCTATCGGGTTACTGGTAGCTCCCAGACTGATCGCTTTTGCTAAAAGAAAGCAGATTG
GACAGCCGGAACGATTTAAGACAATGCAAGCAGTGCTTACAATCTTCGCCGGCGCAATTCTTGGAGTATGCGTTGCACTG
ACATCAGTAGGTGCCGGAGTCTTGGGAAGCGTAATGCTTTTGTACCTGTATCCACTACGTATAACCCCACATCGCCTAGT
TGCTACAGAAATTGTGCACGCTATACCACTAGCGATTATTGCTGGCTTGGGTTATTTGTTCGCAGGTATGGTGGACGGAG
AGATGCTCATTAGCCTGTTAGCAGGTTCAATACCGGCGGTCATTGCAGGAAGTAAGCTTGCCAGCAGGATTACAGGACAA
TGGATCCGGTTCGCTTTAGCAATTGTGCTTGCTGCAGCAGGGTTGAAAGTTCTTTTATAA

Upstream 100 bases:

>100_bases
CAGCTCTGCTCCATACCCAATTAAGCACCAATCCCGGCATAACAAGCCAAATCCTCGGAACGCCACATACAGTGGCACAA
CAGGGTAAGGATATTTTTGC

Downstream 100 bases:

>100_bases
AGAACCATTTCAATGCGCCGTCTGAAAAACAGTTGACACTTATATTTCAAGGAATATGTTACAGGATAAAATCCTTTAAC
TAGATACTACCCGAATATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIDWSYAAAGTFTGFIIGLTGVGGGALMTPILLLFFGISPTTAVATDLWFAAITKIAGARIHHTNGNVDWQVVKRLWAGS
LPMASLIVLLISMGTHIVKVDWLTKGIGIVVLVTAIGLLVAPRLIAFAKRKQIGQPERFKTMQAVLTIFAGAILGVCVAL
TSVGAGVLGSVMLLYLYPLRITPHRLVATEIVHAIPLAIIAGLGYLFAGMVDGEMLISLLAGSIPAVIAGSKLASRITGQ
WIRFALAIVLAAAGLKVLL

Sequences:

>Translated_259_residues
MIDWSYAAAGTFTGFIIGLTGVGGGALMTPILLLFFGISPTTAVATDLWFAAITKIAGARIHHTNGNVDWQVVKRLWAGS
LPMASLIVLLISMGTHIVKVDWLTKGIGIVVLVTAIGLLVAPRLIAFAKRKQIGQPERFKTMQAVLTIFAGAILGVCVAL
TSVGAGVLGSVMLLYLYPLRITPHRLVATEIVHAIPLAIIAGLGYLFAGMVDGEMLISLLAGSIPAVIAGSKLASRITGQ
WIRFALAIVLAAAGLKVLL
>Mature_259_residues
MIDWSYAAAGTFTGFIIGLTGVGGGALMTPILLLFFGISPTTAVATDLWFAAITKIAGARIHHTNGNVDWQVVKRLWAGS
LPMASLIVLLISMGTHIVKVDWLTKGIGIVVLVTAIGLLVAPRLIAFAKRKQIGQPERFKTMQAVLTIFAGAILGVCVAL
TSVGAGVLGSVMLLYLYPLRITPHRLVATEIVHAIPLAIIAGLGYLFAGMVDGEMLISLLAGSIPAVIAGSKLASRITGQ
WIRFALAIVLAAAGLKVLL

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27131; Mature: 27131

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWSYAAAGTFTGFIIGLTGVGGGALMTPILLLFFGISPTTAVATDLWFAAITKIAGAR
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCE
IHHTNGNVDWQVVKRLWAGSLPMASLIVLLISMGTHIVKVDWLTKGIGIVVLVTAIGLLV
EEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHHCHHHHHHHHHHHHHH
APRLIAFAKRKQIGQPERFKTMQAVLTIFAGAILGVCVALTSVGAGVLGSVMLLYLYPLR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
ITPHRLVATEIVHAIPLAIIAGLGYLFAGMVDGEMLISLLAGSIPAVIAGSKLASRITGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
WIRFALAIVLAAAGLKVLL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDWSYAAAGTFTGFIIGLTGVGGGALMTPILLLFFGISPTTAVATDLWFAAITKIAGAR
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCE
IHHTNGNVDWQVVKRLWAGSLPMASLIVLLISMGTHIVKVDWLTKGIGIVVLVTAIGLLV
EEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHHCHHHHHHHHHHHHHH
APRLIAFAKRKQIGQPERFKTMQAVLTIFAGAILGVCVALTSVGAGVLGSVMLLYLYPLR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
ITPHRLVATEIVHAIPLAIIAGLGYLFAGMVDGEMLISLLAGSIPAVIAGSKLASRITGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
WIRFALAIVLAAAGLKVLL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]