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The map label for this gene is rdgC [H]

Identifier: 114331225

GI number: 114331225

Start: 1285421

End: 1286305

Strand: Reverse

Name: rdgC [H]

Synonym: Neut_1228

Alternate gene names: 114331225

Gene position: 1286305-1285421 (Counterclockwise)

Preceding gene: 114331226

Following gene: 114331224

Centisome position: 48.34

GC content: 48.7

Gene sequence:

>885_bases
ATGTGGTTTAAAAATTTACAGATTTACCGTCTTGCCAATGCAGTGATTACTTTTGACGAGCTGGAAGAGCGGTTAGCGAA
GCAAACATTGCAGGGCTGCCTAGGGCTGGAAGCACAGAGCAAGGGCTGGGTTTCCCCGGGAGCCGAGGAAGCTGGCCTGG
TCTACAGCTATGGGCAGCAGATGCTGATCTCGCTGGGGATAGAAAAAAAGCTGTTACCTGTGTCAGTTGTCAATCAGCTT
GCCAAAGTTCGTGCACAGGAAATGGAATCACACCAGGGATACCCACCTGGTCGCAAACAGATGAAAGATATCAAGGAAGC
AGCTTATCGTGAGCTGCTGGCACGTGCGTTTTCTGTCCGGCAACGGAGTCATGTGTGGATCGACCCAGTGGATGGCTGGT
TTGTTGTTGAAGGTGCGAGCGCTTCCAGAGCAGATACCCTGATTGAGGCATTCATTAAATCGACTGGTATTGGGCTAAAG
CGCGTCAGAACTAATATTGCACCAACATCCACCATGACGGCCTGGCTATCGGGCGATGAACCACCTGCAATTTTCTCTGT
TGACAGCGACAGTATTTTCCGCAGCCGCGAGGATAAAAAGATTTCAGTGAGCTATGTGCAGCAATTGCCTGATCTACAGG
AAATTACCCGACATGTCCGGACTGGCAAGGAAGTCATCAAACTGGCAATAACCTGGCGAGACAGGATCTCATTTATTCTC
GATGAAAATCTGCAGTTAAAGCGAATAACCTTGCTTGATATCGACCGGGAATCGACAGAAACAGCTGAAGAACAGTTTGA
TAGCGATTTTTTCCTAATGACGGCTGAATTGCGGCAGCTACTGCCCGAATTGATGGATGCATTAGGGGGAATGGTCGATG
AATAA

Upstream 100 bases:

>100_bases
AGGGCGCCAACTTGCCAACCTGTTAACAGATCCTATCCGGATTACTGGAATCCTCAGATTTGTTGTAGTTAATCGCGCAT
TTCTATCTCAATACAAATTC

Downstream 100 bases:

>100_bases
CCGCCTACAACGGCTGATAAAGGTGCGTCGTTGCGGATAAAGTATGTGTTGCGGGGTTGTTGCTGCTGAGTCCTGCATTT
TTCCTGTTGTGATATTCTAC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MWFKNLQIYRLANAVITFDELEERLAKQTLQGCLGLEAQSKGWVSPGAEEAGLVYSYGQQMLISLGIEKKLLPVSVVNQL
AKVRAQEMESHQGYPPGRKQMKDIKEAAYRELLARAFSVRQRSHVWIDPVDGWFVVEGASASRADTLIEAFIKSTGIGLK
RVRTNIAPTSTMTAWLSGDEPPAIFSVDSDSIFRSREDKKISVSYVQQLPDLQEITRHVRTGKEVIKLAITWRDRISFIL
DENLQLKRITLLDIDRESTETAEEQFDSDFFLMTAELRQLLPELMDALGGMVDE

Sequences:

>Translated_294_residues
MWFKNLQIYRLANAVITFDELEERLAKQTLQGCLGLEAQSKGWVSPGAEEAGLVYSYGQQMLISLGIEKKLLPVSVVNQL
AKVRAQEMESHQGYPPGRKQMKDIKEAAYRELLARAFSVRQRSHVWIDPVDGWFVVEGASASRADTLIEAFIKSTGIGLK
RVRTNIAPTSTMTAWLSGDEPPAIFSVDSDSIFRSREDKKISVSYVQQLPDLQEITRHVRTGKEVIKLAITWRDRISFIL
DENLQLKRITLLDIDRESTETAEEQFDSDFFLMTAELRQLLPELMDALGGMVDE
>Mature_294_residues
MWFKNLQIYRLANAVITFDELEERLAKQTLQGCLGLEAQSKGWVSPGAEEAGLVYSYGQQMLISLGIEKKLLPVSVVNQL
AKVRAQEMESHQGYPPGRKQMKDIKEAAYRELLARAFSVRQRSHVWIDPVDGWFVVEGASASRADTLIEAFIKSTGIGLK
RVRTNIAPTSTMTAWLSGDEPPAIFSVDSDSIFRSREDKKISVSYVQQLPDLQEITRHVRTGKEVIKLAITWRDRISFIL
DENLQLKRITLLDIDRESTETAEEQFDSDFFLMTAELRQLLPELMDALGGMVDE

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=305, Percent_Identity=31.1475409836066, Blast_Score=144, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33297; Mature: 33297

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLQIYRLANAVITFDELEERLAKQTLQGCLGLEAQSKGWVSPGAEEAGLVYSYGQQ
CCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
MLISLGIEKKLLPVSVVNQLAKVRAQEMESHQGYPPGRKQMKDIKEAAYRELLARAFSVR
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QRSHVWIDPVDGWFVVEGASASRADTLIEAFIKSTGIGLKRVRTNIAPTSTMTAWLSGDE
HCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHEEEEECCCC
PPAIFSVDSDSIFRSREDKKISVSYVQQLPDLQEITRHVRTGKEVIKLAITWRDRISFIL
CCEEEEECCHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DENLQLKRITLLDIDRESTETAEEQFDSDFFLMTAELRQLLPELMDALGGMVDE
CCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MWFKNLQIYRLANAVITFDELEERLAKQTLQGCLGLEAQSKGWVSPGAEEAGLVYSYGQQ
CCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
MLISLGIEKKLLPVSVVNQLAKVRAQEMESHQGYPPGRKQMKDIKEAAYRELLARAFSVR
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QRSHVWIDPVDGWFVVEGASASRADTLIEAFIKSTGIGLKRVRTNIAPTSTMTAWLSGDE
HCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHEEEEECCCC
PPAIFSVDSDSIFRSREDKKISVSYVQQLPDLQEITRHVRTGKEVIKLAITWRDRISFIL
CCEEEEECCHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DENLQLKRITLLDIDRESTETAEEQFDSDFFLMTAELRQLLPELMDALGGMVDE
CCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA