| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is purH [H]
Identifier: 114331208
GI number: 114331208
Start: 1264319
End: 1265881
Strand: Direct
Name: purH [H]
Synonym: Neut_1210
Alternate gene names: 114331208
Gene position: 1264319-1265881 (Clockwise)
Preceding gene: 114331207
Following gene: 114331209
Centisome position: 47.51
GC content: 47.79
Gene sequence:
>1563_bases ATGAGTATTAAACAAGCACTCATCAGTGTTTCAGACAAAACAGGCGTGGTTGAGCTGGCCTCGGCTCTGCATCAACTCGA TATTATGATTCTTTCAACCGGCGGGACTGCAAAATTGCTGCAGGAAGCGAGTATTCCCGTCATAGAAGTGAGCGACTATA CTGGCTTCCCTGAAATGCTGGATGGACGGGTTAAGACGCTGCATCCCAAGGTACACGCAGGGATCCTTGCCAGGATGGAT TTGCCTGCACATCAGCAGGCAATGGCACAGGCACAGATTCCAGCGATTGATCTGATAGTGGTTAATCTGTATCCGTTTAC CAGTACAATCGCCCGGCAAGACTGTACAGTTGAAGAGGCAATCGAGAACATTGATATCGGTGGTCCTACTATGATCCGGG CAGCTGCCAAGAATTTTCAGCGGGTTACCGTTGTGACCGACCCGCAGGATTATGAACCACTACTGGAACAAATACGATCA AATAATGGATCAGTTGATCATGATTATCGTTTCAAGTTAGCGCAAAAGGCTTTTTCGCATACTGCACGCTACGATGGGGC AATCAGCAATTATTTGACGGCACTGGAATCCTCAACCGGCCAGCGCAAACCATTTCCGGATCAATTCAATCTCAGTTTCA CATTAACGCAATCTTTGCGTTATGGAGAAAATCCTCATCAGCAGGCAGCGTTTTATCGTGATGCAGCAGATATAACAGGC AGTCTGGCAGACTATAACCAGCTCCAGGGGAAGGCACTGTCCTATAACAATATTGCTGATACCGATGCGGCATTAGCATG TGTCAGAACTTTCGATAAACCCGCCTGCGTTATCATTAAGCATGCCAATCCTTGTGGCGTCGCCATTGCTGATAATCCGC TTGCTGCTTACAAGAAAGCATTTACTACCGACCCGGTATCAGCCTTTGGCGGCATTATCGCGATTAATCGCGCAGTCGAA GCTGATCTGGCTAAAGCAGTGTTGCAACAATTTGTGGAAGTGATTATTGCACCGGAATTCAGCATGGAAGCCAGACAACT TCTGGCAGGAAAATCCAATATTCGGGTACTGACCGTTTCATTGGGCGCGCATGGCAATCTGTATGATCTGAAGCGTGTGG ATGGTGGTTTACTGGTTCAAACACCGGACGATCTTAATCTCACGGCTAATCAGTTACGAGTGGTGACACAAGTAAAGCCA ACGGATGCACAAATTGAGGATTGCCTATTTGCATGGCGAGTGGCAAAGTTTGTCAAATCCAACACCATTGTATTTTGTAG CAATGGCCAAACACTTGGCATTGGTGCCGGACAGATGAGTCGGGTGGACAGTGCCCGTATTGCTTCAATTAAGGCAGAAC AGGTTCATCTTGATTTGCATGGATCTGTCGTTGCATCGGATGCATTTTTTCCGTTTCGGGATGGCCTGGATGTGCTCGCC CAGGCAGGTGCCAAGGCTGTCATCCAACCAGGTGGCAGTATTCGCGATGAAGAGGTCATTGCTGCTGCCAACGAACAAGG GATAGCCATGATCTTTACTGGTGTCAGACATTTCAGACATTAG
Upstream 100 bases:
>100_bases TGCACAAGGCAATCAAAGCAAGGCGGCTGAACTACTTGGCATCAATCGTAATACCTTGCGTAACCGGCTAACCAAACATC AGATCGGATAATTTTTTCAA
Downstream 100 bases:
>100_bases CAGATTACGTTTCTTTTTTGCTTCCCGTCAACTTGTACCCTTAAATTCTATTCAGATAGTCAGATGAAATTACTTGTGGT CGGCAGTGGCGGCAGAGAGC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MSIKQALISVSDKTGVVELASALHQLDIMILSTGGTAKLLQEASIPVIEVSDYTGFPEMLDGRVKTLHPKVHAGILARMD LPAHQQAMAQAQIPAIDLIVVNLYPFTSTIARQDCTVEEAIENIDIGGPTMIRAAAKNFQRVTVVTDPQDYEPLLEQIRS NNGSVDHDYRFKLAQKAFSHTARYDGAISNYLTALESSTGQRKPFPDQFNLSFTLTQSLRYGENPHQQAAFYRDAADITG SLADYNQLQGKALSYNNIADTDAALACVRTFDKPACVIIKHANPCGVAIADNPLAAYKKAFTTDPVSAFGGIIAINRAVE ADLAKAVLQQFVEVIIAPEFSMEARQLLAGKSNIRVLTVSLGAHGNLYDLKRVDGGLLVQTPDDLNLTANQLRVVTQVKP TDAQIEDCLFAWRVAKFVKSNTIVFCSNGQTLGIGAGQMSRVDSARIASIKAEQVHLDLHGSVVASDAFFPFRDGLDVLA QAGAKAVIQPGGSIRDEEVIAAANEQGIAMIFTGVRHFRH
Sequences:
>Translated_520_residues MSIKQALISVSDKTGVVELASALHQLDIMILSTGGTAKLLQEASIPVIEVSDYTGFPEMLDGRVKTLHPKVHAGILARMD LPAHQQAMAQAQIPAIDLIVVNLYPFTSTIARQDCTVEEAIENIDIGGPTMIRAAAKNFQRVTVVTDPQDYEPLLEQIRS NNGSVDHDYRFKLAQKAFSHTARYDGAISNYLTALESSTGQRKPFPDQFNLSFTLTQSLRYGENPHQQAAFYRDAADITG SLADYNQLQGKALSYNNIADTDAALACVRTFDKPACVIIKHANPCGVAIADNPLAAYKKAFTTDPVSAFGGIIAINRAVE ADLAKAVLQQFVEVIIAPEFSMEARQLLAGKSNIRVLTVSLGAHGNLYDLKRVDGGLLVQTPDDLNLTANQLRVVTQVKP TDAQIEDCLFAWRVAKFVKSNTIVFCSNGQTLGIGAGQMSRVDSARIASIKAEQVHLDLHGSVVASDAFFPFRDGLDVLA QAGAKAVIQPGGSIRDEEVIAAANEQGIAMIFTGVRHFRH >Mature_519_residues SIKQALISVSDKTGVVELASALHQLDIMILSTGGTAKLLQEASIPVIEVSDYTGFPEMLDGRVKTLHPKVHAGILARMDL PAHQQAMAQAQIPAIDLIVVNLYPFTSTIARQDCTVEEAIENIDIGGPTMIRAAAKNFQRVTVVTDPQDYEPLLEQIRSN NGSVDHDYRFKLAQKAFSHTARYDGAISNYLTALESSTGQRKPFPDQFNLSFTLTQSLRYGENPHQQAAFYRDAADITGS LADYNQLQGKALSYNNIADTDAALACVRTFDKPACVIIKHANPCGVAIADNPLAAYKKAFTTDPVSAFGGIIAINRAVEA DLAKAVLQQFVEVIIAPEFSMEARQLLAGKSNIRVLTVSLGAHGNLYDLKRVDGGLLVQTPDDLNLTANQLRVVTQVKPT DAQIEDCLFAWRVAKFVKSNTIVFCSNGQTLGIGAGQMSRVDSARIASIKAEQVHLDLHGSVVASDAFFPFRDGLDVLAQ AGAKAVIQPGGSIRDEEVIAAANEQGIAMIFTGVRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=494, Percent_Identity=37.0445344129555, Blast_Score=257, Evalue=2e-68, Organism=Escherichia coli, GI1790439, Length=525, Percent_Identity=57.3333333333333, Blast_Score=593, Evalue=1e-171, Organism=Caenorhabditis elegans, GI71985564, Length=518, Percent_Identity=34.1698841698842, Blast_Score=251, Evalue=4e-67, Organism=Caenorhabditis elegans, GI71985574, Length=366, Percent_Identity=26.2295081967213, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71985556, Length=60, Percent_Identity=50, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323768, Length=492, Percent_Identity=35.5691056910569, Blast_Score=266, Evalue=8e-72, Organism=Saccharomyces cerevisiae, GI6323056, Length=492, Percent_Identity=35.3658536585366, Blast_Score=266, Evalue=9e-72, Organism=Drosophila melanogaster, GI24649832, Length=491, Percent_Identity=36.4562118126273, Blast_Score=251, Evalue=9e-67,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56245; Mature: 56113
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKQALISVSDKTGVVELASALHQLDIMILSTGGTAKLLQEASIPVIEVSDYTGFPEML CCHHHHHHHCCCCCCHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCEEEECCCCCCHHHH DGRVKTLHPKVHAGILARMDLPAHQQAMAQAQIPAIDLIVVNLYPFTSTIARQDCTVEEA CCCCEEECCHHHHCEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCHHHHHHCCCCHHHH IENIDIGGPTMIRAAAKNFQRVTVVTDPQDYEPLLEQIRSNNGSVDHDYRFKLAQKAFSH HHHCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TARYDGAISNYLTALESSTGQRKPFPDQFNLSFTLTQSLRYGENPHQQAAFYRDAADITG HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHCC SLADYNQLQGKALSYNNIADTDAALACVRTFDKPACVIIKHANPCGVAIADNPLAAYKKA CHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHH FTTDPVSAFGGIIAINRAVEADLAKAVLQQFVEVIIAPEFSMEARQLLAGKSNIRVLTVS CCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEE LGAHGNLYDLKRVDGGLLVQTPDDLNLTANQLRVVTQVKPTDAQIEDCLFAWRVAKFVKS ECCCCCEEEHEECCCCEEEECCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCC NTIVFCSNGQTLGIGAGQMSRVDSARIASIKAEQVHLDLHGSVVASDAFFPFRDGLDVLA CEEEEECCCCEEEECCCHHHHCCCHHHHEEEEEEEEEEECCCEEECCCCCCCCCCHHHHH QAGAKAVIQPGGSIRDEEVIAAANEQGIAMIFTGVRHFRH HCCCCEEECCCCCCCCCCEEEECCCCCEEEEEEHHHHHCC >Mature Secondary Structure SIKQALISVSDKTGVVELASALHQLDIMILSTGGTAKLLQEASIPVIEVSDYTGFPEML CHHHHHHHCCCCCCHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCEEEECCCCCCHHHH DGRVKTLHPKVHAGILARMDLPAHQQAMAQAQIPAIDLIVVNLYPFTSTIARQDCTVEEA CCCCEEECCHHHHCEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCHHHHHHCCCCHHHH IENIDIGGPTMIRAAAKNFQRVTVVTDPQDYEPLLEQIRSNNGSVDHDYRFKLAQKAFSH HHHCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TARYDGAISNYLTALESSTGQRKPFPDQFNLSFTLTQSLRYGENPHQQAAFYRDAADITG HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHCC SLADYNQLQGKALSYNNIADTDAALACVRTFDKPACVIIKHANPCGVAIADNPLAAYKKA CHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHH FTTDPVSAFGGIIAINRAVEADLAKAVLQQFVEVIIAPEFSMEARQLLAGKSNIRVLTVS CCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEE LGAHGNLYDLKRVDGGLLVQTPDDLNLTANQLRVVTQVKPTDAQIEDCLFAWRVAKFVKS ECCCCCEEEHEECCCCEEEECCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCC NTIVFCSNGQTLGIGAGQMSRVDSARIASIKAEQVHLDLHGSVVASDAFFPFRDGLDVLA CEEEEECCCCEEEECCCHHHHCCCHHHHEEEEEEEEEEECCCEEECCCCCCCCCCHHHHH QAGAKAVIQPGGSIRDEEVIAAANEQGIAMIFTGVRHFRH HCCCCEEECCCCCCCCCCEEEECCCCCEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA