| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114331147
Identifier: 114331147
GI number: 114331147
Start: 1187957
End: 1190353
Strand: Direct
Name: 114331147
Synonym: Neut_1149
Alternate gene names: NA
Gene position: 1187957-1190353 (Clockwise)
Preceding gene: 114331146
Following gene: 114331148
Centisome position: 44.64
GC content: 44.72
Gene sequence:
>2397_bases ATGAAGGATATTTGTGTGAAGATAATTGATTTCAGAGCAGAAGGTATTTCTCCAGGCGTTTTATCCAAAGTGTTTTTGAT TGGTATGCTTGCATCTACCTGGATGGTGCAGGCTGCCGGCTTGGGTAAGTTGACCGTAAGCTCATATTTTGGGCAACCTC TCAATGCAGAAATAGCTCTGGAATCTGTAACAGATAAAGAGATCGATTCGCTATCAGCCCGACTTGCTTCGCCCAAGATT TTTCAGAAAACTGGTGTCAATCTAGCCCCCTATCATGCAACGTTGTCTGTATCTGTTGAAAAGCGAGCCGATGGGCACCC CTATATCCGTATAAGCTCATCACAGGCAATCAACGAGCCGTTCCTCAATTTGCTCATTGAGCTTAGCTCTTCATCGGGGC ATCTGTTACGTGAATATAATGTTCTGCTTGACCCCGCTGAAACACAAAAGGCAGCATCCGCTGAGCCGGTTGTGCAATCC GATAGAGATAAGACAGGAAGTGTTGCCGCAACAACTGCACCCGGAAAGACTCAATTATCCGTTGAGACTACTCTCCCTCC TGCTCAGACGGGTGGTATATATGGCCCGGTTATTCGAGGAGATACCCTGAGTAGAATTGCGCGACAAGTATCGCCTGACA GCGTTAATCTTAACCAAGTGCTGGTTGCGTTGTACCGTGCCAATCGTGATGCTTTCCTCGAAAGAAACATGAATTTGCTT AAAGTGGGTGTCATTCTGCGTATTCCTGATGAAAGCGAGATCTCGTCTGTTACCACTAAAGAAGCTTCTCGTGAAATTGC TGTACAGAAAGAAAGCTGGAACGATTATCGACAAAAAATTGCAGACCTGGCTGATAATTTTTCTGAAAAATCTGATCTAA AACAATCTCAAACAGGGAAAATTACAACTGTTTCCGGAGAATCTTCTGTTATCGGATCCAATAAATCCGAGGAAGTTTTG ATTCTCTCAAAAGGAGAGTTACTTAGCGATAACCATCCGCTTGCTAAAAAGGCAGAAGACAGAACTGCCCAGAATTATTT GTACATGATGGAAGAGGATGCAATTGCGAAAGAGCGCGCCTTGCAGGAAGCAAATGAGCGAGTGGCTATTTTGGAGCAGA ATGTTGCGAAATTGCAGCGTCTACTTGAATTGAAAGGCTCGACTCTTGAGAGCAAAGCCGGAATTGAACTGGAGCATACG CAGCATATACCTGACCTGCAGGCAATTTCAACTCCGGCCAAACAGGCTGATATTGCAGTCGTTGGGGACTCAGCTGAAAC TCTTGGTTCTGTTGCAGGAGCTTCAGAAAATTCAACTTCTCCGATTACTATTCCGGCTCAATCAGTCAAGCCGGCTTCAT TATCTAAGCCACTTCAACCTGTCAGTCCTGAATCTGGTGAATCAGATTTAATGGATACATTGTTGCAACATGTAGATAAA AACAGCAAATGGGCTGCCGCAGGATTGGGGGTATTGCTGGTGATTGCGTTGGGCGCATCTTTAATTCTCCGAAAAAGAAA GCAATTCGGGGACCCGGATTGCTCTGACATATATGATTATGCCGAGAAGGACGATAAATCGATGTCTTCGGGGATGGCCA AGATCACATCTGTTGATGAACATATAGAAAAACCGGACGAAGAATTGATTCAGCGTACGGTCAGTACATCAGAATCGGGT GATTTCAATTTGACTGATACTGCTGGCAATCAGGCCGATGTCGATCTTGATTTGTTCTTCGGTGGTAAACAGGATGAAAA AGCAACCAAACCTCTTTTCTTCACTGCGGATTCTGTCAGTCAGACTTATGCGGAAAATGAAACAACGCTCGATGAATCGA ATGAGCTGGATAATGAGATTAAAACCAGCACGATAGAACCTGATCCGGCTGAATGCCAGAAGGGGGCTCTTATTGGTGCC GAAGAAGATGTTGAACGTAAAGAAGACGAGACAAGTAAGCAATGGATTTTTACATCTTACGACGATGCCCTGGAAGAAAA ATCTGATCTTGTGCAGGCACAAGATCATAGTGAAGTGCGTGCATCATCCCATGATGCGGAACATCAAATTGATTTTGATC TGAAATTATCTGAAGAAAAGGAATCCACCAAAGATTCTCAGATGATGGATGAGTTGCCGGAATTAAATTCCAGGCTGGCA AATATTGATCTTGATCTTGGAGATGAGCCTGGTGAGAAGCCGCAAGCCGTCAATGAAAGCTCTGAAGTTGGTACAGATAT GCAATGGCGGGAAGTCGCAACCAAGCTTGATCTGGCCAGAGCCTATCTCGAAATGGATGATAACGAAGGTGCCAGAGATA TTCTGGAAGAAGTGTTGCGTGAGGGTGATCACGAACAACAATCTGCCGCCCGTTTGATGCTGGACAAAATCAGCTGA
Upstream 100 bases:
>100_bases TATTTTTCTCAATCTCGGACCGTCTTGCTATAGACAAGATGACCTTCGCTTTCTGATATCGATTGCCATCCATATTTTGT ATCAGAGAGTTCGGGTAACA
Downstream 100 bases:
>100_bases AGCCAGATACGGATATAGCCTACCGGAAGCTATCCTGATTGAGTGCTTTCTTGTATTCCCATATTTGTTGTGAAATTATT CATGAAGGATAAAGTATTCC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Tfp Pilus Assembly Protein FimV-Like Protein; FimV Protein; FimV N-Terminal Domain Protein; LysM Domain Protein; Type 4 Pilus Biogenesis; LysM Domain-Containing Protein; Motility Protein FimV; Lysm Domain; Transmembrane Tfp Pilus Assembly FimV Protein; Type IV Fimbrial Biogenesis Protein FimV; TPR Repeat-Containing Protein; FimV C-Terminal Domain-Containing Protein; Protein Containing Tetratricopeptide Repeats; Tfp Pilus Assembly Protein FimV; LysM Domain-Containing; Tfp Pilus Assembly Protein FimV-Like; Transmembrane Tfp Pilus Assembly Protein FimV; FimV N-Terminal Domain; FimV N-Terminal Domain-Containing Protein; FimV Type IV Pilus Assembly Protein
Number of amino acids: Translated: 798; Mature: 798
Protein sequence:
>798_residues MKDICVKIIDFRAEGISPGVLSKVFLIGMLASTWMVQAAGLGKLTVSSYFGQPLNAEIALESVTDKEIDSLSARLASPKI FQKTGVNLAPYHATLSVSVEKRADGHPYIRISSSQAINEPFLNLLIELSSSSGHLLREYNVLLDPAETQKAASAEPVVQS DRDKTGSVAATTAPGKTQLSVETTLPPAQTGGIYGPVIRGDTLSRIARQVSPDSVNLNQVLVALYRANRDAFLERNMNLL KVGVILRIPDESEISSVTTKEASREIAVQKESWNDYRQKIADLADNFSEKSDLKQSQTGKITTVSGESSVIGSNKSEEVL ILSKGELLSDNHPLAKKAEDRTAQNYLYMMEEDAIAKERALQEANERVAILEQNVAKLQRLLELKGSTLESKAGIELEHT QHIPDLQAISTPAKQADIAVVGDSAETLGSVAGASENSTSPITIPAQSVKPASLSKPLQPVSPESGESDLMDTLLQHVDK NSKWAAAGLGVLLVIALGASLILRKRKQFGDPDCSDIYDYAEKDDKSMSSGMAKITSVDEHIEKPDEELIQRTVSTSESG DFNLTDTAGNQADVDLDLFFGGKQDEKATKPLFFTADSVSQTYAENETTLDESNELDNEIKTSTIEPDPAECQKGALIGA EEDVERKEDETSKQWIFTSYDDALEEKSDLVQAQDHSEVRASSHDAEHQIDFDLKLSEEKESTKDSQMMDELPELNSRLA NIDLDLGDEPGEKPQAVNESSEVGTDMQWREVATKLDLARAYLEMDDNEGARDILEEVLREGDHEQQSAARLMLDKIS
Sequences:
>Translated_798_residues MKDICVKIIDFRAEGISPGVLSKVFLIGMLASTWMVQAAGLGKLTVSSYFGQPLNAEIALESVTDKEIDSLSARLASPKI FQKTGVNLAPYHATLSVSVEKRADGHPYIRISSSQAINEPFLNLLIELSSSSGHLLREYNVLLDPAETQKAASAEPVVQS DRDKTGSVAATTAPGKTQLSVETTLPPAQTGGIYGPVIRGDTLSRIARQVSPDSVNLNQVLVALYRANRDAFLERNMNLL KVGVILRIPDESEISSVTTKEASREIAVQKESWNDYRQKIADLADNFSEKSDLKQSQTGKITTVSGESSVIGSNKSEEVL ILSKGELLSDNHPLAKKAEDRTAQNYLYMMEEDAIAKERALQEANERVAILEQNVAKLQRLLELKGSTLESKAGIELEHT QHIPDLQAISTPAKQADIAVVGDSAETLGSVAGASENSTSPITIPAQSVKPASLSKPLQPVSPESGESDLMDTLLQHVDK NSKWAAAGLGVLLVIALGASLILRKRKQFGDPDCSDIYDYAEKDDKSMSSGMAKITSVDEHIEKPDEELIQRTVSTSESG DFNLTDTAGNQADVDLDLFFGGKQDEKATKPLFFTADSVSQTYAENETTLDESNELDNEIKTSTIEPDPAECQKGALIGA EEDVERKEDETSKQWIFTSYDDALEEKSDLVQAQDHSEVRASSHDAEHQIDFDLKLSEEKESTKDSQMMDELPELNSRLA NIDLDLGDEPGEKPQAVNESSEVGTDMQWREVATKLDLARAYLEMDDNEGARDILEEVLREGDHEQQSAARLMLDKIS >Mature_798_residues MKDICVKIIDFRAEGISPGVLSKVFLIGMLASTWMVQAAGLGKLTVSSYFGQPLNAEIALESVTDKEIDSLSARLASPKI FQKTGVNLAPYHATLSVSVEKRADGHPYIRISSSQAINEPFLNLLIELSSSSGHLLREYNVLLDPAETQKAASAEPVVQS DRDKTGSVAATTAPGKTQLSVETTLPPAQTGGIYGPVIRGDTLSRIARQVSPDSVNLNQVLVALYRANRDAFLERNMNLL KVGVILRIPDESEISSVTTKEASREIAVQKESWNDYRQKIADLADNFSEKSDLKQSQTGKITTVSGESSVIGSNKSEEVL ILSKGELLSDNHPLAKKAEDRTAQNYLYMMEEDAIAKERALQEANERVAILEQNVAKLQRLLELKGSTLESKAGIELEHT QHIPDLQAISTPAKQADIAVVGDSAETLGSVAGASENSTSPITIPAQSVKPASLSKPLQPVSPESGESDLMDTLLQHVDK NSKWAAAGLGVLLVIALGASLILRKRKQFGDPDCSDIYDYAEKDDKSMSSGMAKITSVDEHIEKPDEELIQRTVSTSESG DFNLTDTAGNQADVDLDLFFGGKQDEKATKPLFFTADSVSQTYAENETTLDESNELDNEIKTSTIEPDPAECQKGALIGA EEDVERKEDETSKQWIFTSYDDALEEKSDLVQAQDHSEVRASSHDAEHQIDFDLKLSEEKESTKDSQMMDELPELNSRLA NIDLDLGDEPGEKPQAVNESSEVGTDMQWREVATKLDLARAYLEMDDNEGARDILEEVLREGDHEQQSAARLMLDKIS
Specific function: Unknown
COG id: COG3170
COG function: function code NU; Tfp pilus assembly protein FimV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87113; Mature: 87113
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDICVKIIDFRAEGISPGVLSKVFLIGMLASTWMVQAAGLGKLTVSSYFGQPLNAEIAL CCCHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCEEEE ESVTDKEIDSLSARLASPKIFQKTGVNLAPYHATLSVSVEKRADGHPYIRISSSQAINEP EHHCHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCHHHHH FLNLLIELSSSSGHLLREYNVLLDPAETQKAASAEPVVQSDRDKTGSVAATTAPGKTQLS HHHHHHHCCCCCCCEEEEHHEEECCHHHHHHCCCCCCHHCCCCCCCCEEEECCCCCEEEE VETTLPPAQTGGIYGPVIRGDTLSRIARQVSPDSVNLNQVLVALYRANRDAFLERNMNLL EEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEE KVGVILRIPDESEISSVTTKEASREIAVQKESWNDYRQKIADLADNFSEKSDLKQSQTGK EEEEEEECCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC ITTVSGESSVIGSNKSEEVLILSKGELLSDNHPLAKKAEDRTAQNYLYMMEEDAIAKERA EEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEECHHHHHHHHH LQEANERVAILEQNVAKLQRLLELKGSTLESKAGIELEHTQHIPDLQAISTPAKQADIAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHCCCCCCHHHHCCCCCCCCEEE VGDSAETLGSVAGASENSTSPITIPAQSVKPASLSKPLQPVSPESGESDLMDTLLQHVDK ECCCHHHHHHHCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCC NSKWAAAGLGVLLVIALGASLILRKRKQFGDPDCSDIYDYAEKDDKSMSSGMAKITSVDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HIEKPDEELIQRTVSTSESGDFNLTDTAGNQADVDLDLFFGGKQDEKATKPLFFTADSVS HHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEECCHHH QTYAENETTLDESNELDNEIKTSTIEPDPAECQKGALIGAEEDVERKEDETSKQWIFTSY HHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECH DDALEEKSDLVQAQDHSEVRASSHDAEHQIDFDLKLSEEKESTKDSQMMDELPELNSRLA HHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCHHHCCHHHHHHHHHHHHHHHHE NIDLDLGDEPGEKPQAVNESSEVGTDMQWREVATKLDLARAYLEMDDNEGARDILEEVLR EEEEECCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH EGDHEQQSAARLMLDKIS CCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKDICVKIIDFRAEGISPGVLSKVFLIGMLASTWMVQAAGLGKLTVSSYFGQPLNAEIAL CCCHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCEEEE ESVTDKEIDSLSARLASPKIFQKTGVNLAPYHATLSVSVEKRADGHPYIRISSSQAINEP EHHCHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCHHHHH FLNLLIELSSSSGHLLREYNVLLDPAETQKAASAEPVVQSDRDKTGSVAATTAPGKTQLS HHHHHHHCCCCCCCEEEEHHEEECCHHHHHHCCCCCCHHCCCCCCCCEEEECCCCCEEEE VETTLPPAQTGGIYGPVIRGDTLSRIARQVSPDSVNLNQVLVALYRANRDAFLERNMNLL EEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEE KVGVILRIPDESEISSVTTKEASREIAVQKESWNDYRQKIADLADNFSEKSDLKQSQTGK EEEEEEECCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC ITTVSGESSVIGSNKSEEVLILSKGELLSDNHPLAKKAEDRTAQNYLYMMEEDAIAKERA EEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEECHHHHHHHHH LQEANERVAILEQNVAKLQRLLELKGSTLESKAGIELEHTQHIPDLQAISTPAKQADIAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHCCCCCCHHHHCCCCCCCCEEE VGDSAETLGSVAGASENSTSPITIPAQSVKPASLSKPLQPVSPESGESDLMDTLLQHVDK ECCCHHHHHHHCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCC NSKWAAAGLGVLLVIALGASLILRKRKQFGDPDCSDIYDYAEKDDKSMSSGMAKITSVDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HIEKPDEELIQRTVSTSESGDFNLTDTAGNQADVDLDLFFGGKQDEKATKPLFFTADSVS HHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEECCHHH QTYAENETTLDESNELDNEIKTSTIEPDPAECQKGALIGAEEDVERKEDETSKQWIFTSY HHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECH DDALEEKSDLVQAQDHSEVRASSHDAEHQIDFDLKLSEEKESTKDSQMMDELPELNSRLA HHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCHHHCCHHHHHHHHHHHHHHHHE NIDLDLGDEPGEKPQAVNESSEVGTDMQWREVATKLDLARAYLEMDDNEGARDILEEVLR EEEEECCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH EGDHEQQSAARLMLDKIS CCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA