| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
Click here to switch to the map view.
The map label for this gene is yeaY [C]
Identifier: 114331132
GI number: 114331132
Start: 1174856
End: 1175347
Strand: Reverse
Name: yeaY [C]
Synonym: Neut_1134
Alternate gene names: 114331132
Gene position: 1175347-1174856 (Counterclockwise)
Preceding gene: 114331162
Following gene: 114331131
Centisome position: 44.17
GC content: 46.54
Gene sequence:
>492_bases ATGCCGACGGATATCAGAAATTTTGCGGCTACAGACATCCCCTATCAACTGATCAATCAAAGCATTGATACCTATAAGAA TGCTCCGATCCGCTGGGGAGGCACAGTTATTGAAGTGGAAAATGAAGCCGATTCCAGCCTGATGCAGGTACTTTTTTATC CACTTGATCGTAATGGATACCCACAAACCAACAAACTCGGAGAAGGGCGTTTTGCTGTCGAAACCAGTGAATTCCTGGAC CCGGCAATTTTTGTCAAAGGAGCGGAAGTGACTATCACCGGATCAGTAAAGGGGGGTATTGAGCGCACAGTTGGAAACAA AACCATACATATCCCGCTCATTACAGCCAAGGCCATCCATCTCTGGTCGCAGGCTTATCGGGAAGATAATATGTACTGGA ACAGCAGATACCGTTACGGACCTTATCCCGGCTATTACGGGTATCCCTCTTTCTACAACGGCTATTACAGACCCTACAGA TTATGGTGGTAA
Upstream 100 bases:
>100_bases AATCAAAGCTTATTACTCATCAGCCAAGAAAAATATGAAACCCTCAATCCCGTTTCGCCTCCTGCTTTGCAGCCTGCTCT TCCTAGGTGCATGCACCAGC
Downstream 100 bases:
>100_bases TACCACGCTATTCTTGCTCCATTCATCTCGGTGAGCATCAATATAAGCCATATCAGACTGGAAGTGACAAAGACCAATCG CCAGATGGTAGCCGGATTGT
Product: outer membrane lipoprotein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Slp Family; Starvation-Inducible Outer Membrane Lipoprotein; Slp Family Outer Membrane Lipoprotein; Outer Membrane Protein Slp; Outer Membrane Lipoprotein
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPTDIRNFAATDIPYQLINQSIDTYKNAPIRWGGTVIEVENEADSSLMQVLFYPLDRNGYPQTNKLGEGRFAVETSEFLD PAIFVKGAEVTITGSVKGGIERTVGNKTIHIPLITAKAIHLWSQAYREDNMYWNSRYRYGPYPGYYGYPSFYNGYYRPYR LWW
Sequences:
>Translated_163_residues MPTDIRNFAATDIPYQLINQSIDTYKNAPIRWGGTVIEVENEADSSLMQVLFYPLDRNGYPQTNKLGEGRFAVETSEFLD PAIFVKGAEVTITGSVKGGIERTVGNKTIHIPLITAKAIHLWSQAYREDNMYWNSRYRYGPYPGYYGYPSFYNGYYRPYR LWW >Mature_162_residues PTDIRNFAATDIPYQLINQSIDTYKNAPIRWGGTVIEVENEADSSLMQVLFYPLDRNGYPQTNKLGEGRFAVETSEFLDP AIFVKGAEVTITGSVKGGIERTVGNKTIHIPLITAKAIHLWSQAYREDNMYWNSRYRYGPYPGYYGYPSFYNGYYRPYRL WW
Specific function: Unknown
COG id: COG3065
COG function: function code M; Starvation-inducible outer membrane lipoprotein
Gene ontology:
Cell location: Attached to the membrane by a lipid anchor (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18860; Mature: 18729
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDIRNFAATDIPYQLINQSIDTYKNAPIRWGGTVIEVENEADSSLMQVLFYPLDRNGY CCCCCCCHHCCCCCHHHHHHHHHHHCCCCEEECCEEEEECCCCHHHHHHHHHEECCCCCC PQTNKLGEGRFAVETSEFLDPAIFVKGAEVTITGSVKGGIERTVGNKTIHIPLITAKAIH CCCCCCCCCEEEEEHHHHCCCEEEEECCEEEEEECCCCCEEECCCCCEEEEEEEHHHHHH LWSQAYREDNMYWNSRYRYGPYPGYYGYPSFYNGYYRPYRLWW HHHHHHHCCCCEECCEEECCCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure PTDIRNFAATDIPYQLINQSIDTYKNAPIRWGGTVIEVENEADSSLMQVLFYPLDRNGY CCCCCCHHCCCCCHHHHHHHHHHHCCCCEEECCEEEEECCCCHHHHHHHHHEECCCCCC PQTNKLGEGRFAVETSEFLDPAIFVKGAEVTITGSVKGGIERTVGNKTIHIPLITAKAIH CCCCCCCCCEEEEEHHHHCCCEEEEECCEEEEEECCCCCEEECCCCCEEEEEEEHHHHHH LWSQAYREDNMYWNSRYRYGPYPGYYGYPSFYNGYYRPYRLWW HHHHHHHCCCCEECCEEECCCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA