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The map label for this gene is dksA [H]

Identifier: 114331115

GI number: 114331115

Start: 1156366

End: 1156791

Strand: Reverse

Name: dksA [H]

Synonym: Neut_1117

Alternate gene names: 114331115

Gene position: 1156791-1156366 (Counterclockwise)

Preceding gene: 114331116

Following gene: 114331114

Centisome position: 43.47

GC content: 47.89

Gene sequence:

>426_bases
ATGGGTAAACAATTGGAATCAAACACCATTCCCCCTTATGAACCCAAAGCAGGTGAGGAATATATGAGCCCGGAGCAATT
GGCACATTTCCGGAAAATACTGGAAGTCCAGCGGGCTGAACTTGGTAAGGAAATTGATCGTACTGTACACGTCATGCAGG
AAGAATCCACAATTTTTGCTGACCCGGCTGACCGGGCCACCCAAGAATCTGACATGGCGCTGGAACTGCGCAGCCGTGAC
CGCGAACGCAAGCTGATCAAAAAAATTGGTGAAATCATCACCAAAATTGACGAGGGTGATTATGGTTATTGCGAAAAATG
TGGTATCGAAATTGGCCTAAAGCGGCTGGAAGCTCGGCCAACAGCAACACTTTGTATCGACTGCAAGACCCTGGACGAAA
TCCGGGAAAGACAAGTCGCCAAATAA

Upstream 100 bases:

>100_bases
TGAAAACTTGCTATTCCTTATTATTTCTGGTATTGATGACAGATTTCTTTTCCTCAACTCTACAATTATAAAGCGTATTA
TCAGAAGGAGCATGTCACGA

Downstream 100 bases:

>100_bases
CAGTTTAGGGCCTGTTCCCGTTTAATCTCAAGCTATTGATTTAAAGAAGCAAGCTCGTACGCTGTATTTCAACAGCAATA
CGAGCTTGCAATGTCACGAT

Product: transcriptional regulators, TraR/DksA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MGKQLESNTIPPYEPKAGEEYMSPEQLAHFRKILEVQRAELGKEIDRTVHVMQEESTIFADPADRATQESDMALELRSRD
RERKLIKKIGEIITKIDEGDYGYCEKCGIEIGLKRLEARPTATLCIDCKTLDEIRERQVAK

Sequences:

>Translated_141_residues
MGKQLESNTIPPYEPKAGEEYMSPEQLAHFRKILEVQRAELGKEIDRTVHVMQEESTIFADPADRATQESDMALELRSRD
RERKLIKKIGEIITKIDEGDYGYCEKCGIEIGLKRLEARPTATLCIDCKTLDEIRERQVAK
>Mature_140_residues
GKQLESNTIPPYEPKAGEEYMSPEQLAHFRKILEVQRAELGKEIDRTVHVMQEESTIFADPADRATQESDMALELRSRDR
ERKLIKKIGEIITKIDEGDYGYCEKCGIEIGLKRLEARPTATLCIDCKTLDEIRERQVAK

Specific function: Dosage-dependent suppressor of a dnaK deletion mutation. It suppressed not only the temperature-sensitive growth but also the filamentous phenotype of the dnaK deletion strain, while the defect of lambda growth is not suppressed [H]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=131, Percent_Identity=63.3587786259542, Blast_Score=178, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16197; Mature: 16066

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKQLESNTIPPYEPKAGEEYMSPEQLAHFRKILEVQRAELGKEIDRTVHVMQEESTIFA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
DPADRATQESDMALELRSRDRERKLIKKIGEIITKIDEGDYGYCEKCGIEIGLKRLEARP
CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
TATLCIDCKTLDEIRERQVAK
CEEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKQLESNTIPPYEPKAGEEYMSPEQLAHFRKILEVQRAELGKEIDRTVHVMQEESTIFA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
DPADRATQESDMALELRSRDRERKLIKKIGEIITKIDEGDYGYCEKCGIEIGLKRLEARP
CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
TATLCIDCKTLDEIRERQVAK
CEEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]