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The map label for this gene is yacF [C]

Identifier: 114331045

GI number: 114331045

Start: 1083911

End: 1084666

Strand: Direct

Name: yacF [C]

Synonym: Neut_1046

Alternate gene names: 114331045

Gene position: 1083911-1084666 (Clockwise)

Preceding gene: 114331044

Following gene: 114331046

Centisome position: 40.73

GC content: 44.44

Gene sequence:

>756_bases
GTGATCTGTTACGAATTACCCCTGAACGAACGAATCCGCATGTTACTGAGACTGGAGGATTTGTTCGACAAAATTGATTT
TTTTTCGGCTAGGGATACCTCTTTCGAACATCATGCTGCTCTGGTTGCATTGTTTGAAATTCTTGATGTTACCAGCAGAT
CTGATCTTAAGTCGGATCTGCTGCAGGAATTGGATAAACAACGAACCATGCTGGAAGGTTTGCAAGATAACCCGGGCGTA
TCAGAAAAAGCACTCATTCATATATTGCAGGATATTCGAGCTGCTTTCCGTGGATTGCTTGATATACCAGGCAGGATTGG
CGGACATTTGCGGGATGATGAATGGCTGATGAGTGTCAAGCAGCGTATGAGCATTCCAGGAGGGGCGTGCGAGTTTGATT
TGCCCGCCTATCATTACTGGCTGAATATGGCTCCAGATGCCCGCAGGGCAGATCTCCAGAACTGGATTACACCTCTTACT
TCTATCCGTAGCGGGATCAATATCATACTGAATATATTGAGAAACAGCGGAACAAAATTTTGTTACATTGCTGCTAAAGG
AGTATTCCAGCAGGCTGGTTCAGAGCATCAGGCACATCTTTTGTGCCTGCATATCAGTGATGAAATTTCCTGCATCCCGG
AGATCAGTGCCAATAAATATGCGCTCAATATACGATTTATTCCCTGGCGCTCGGATCACAAGACAGAAGTGTGTGAAGAA
GATGTTCCTTTTGAATTGACTTTCTGCAGTTTATGA

Upstream 100 bases:

>100_bases
TGCGCTTGTTGACAAACACAGCTTCTGAACGATTCTGGTAAGATGCATGTAACTGCAGTTTTCTGCTATGCTTTAACGTT
CCTACGTCATCTTACTTACT

Downstream 100 bases:

>100_bases
GTAGTGGTGTGATTGAATGGAAAGGCGACCAGGTAAATCTCCAACCGTAAACTGTCCCCAATGTGGTGAAGTCGTTGTCT
GGGAAAAATCAAGCAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MICYELPLNERIRMLLRLEDLFDKIDFFSARDTSFEHHAALVALFEILDVTSRSDLKSDLLQELDKQRTMLEGLQDNPGV
SEKALIHILQDIRAAFRGLLDIPGRIGGHLRDDEWLMSVKQRMSIPGGACEFDLPAYHYWLNMAPDARRADLQNWITPLT
SIRSGINIILNILRNSGTKFCYIAAKGVFQQAGSEHQAHLLCLHISDEISCIPEISANKYALNIRFIPWRSDHKTEVCEE
DVPFELTFCSL

Sequences:

>Translated_251_residues
MICYELPLNERIRMLLRLEDLFDKIDFFSARDTSFEHHAALVALFEILDVTSRSDLKSDLLQELDKQRTMLEGLQDNPGV
SEKALIHILQDIRAAFRGLLDIPGRIGGHLRDDEWLMSVKQRMSIPGGACEFDLPAYHYWLNMAPDARRADLQNWITPLT
SIRSGINIILNILRNSGTKFCYIAAKGVFQQAGSEHQAHLLCLHISDEISCIPEISANKYALNIRFIPWRSDHKTEVCEE
DVPFELTFCSL
>Mature_251_residues
MICYELPLNERIRMLLRLEDLFDKIDFFSARDTSFEHHAALVALFEILDVTSRSDLKSDLLQELDKQRTMLEGLQDNPGV
SEKALIHILQDIRAAFRGLLDIPGRIGGHLRDDEWLMSVKQRMSIPGGACEFDLPAYHYWLNMAPDARRADLQNWITPLT
SIRSGINIILNILRNSGTKFCYIAAKGVFQQAGSEHQAHLLCLHISDEISCIPEISANKYALNIRFIPWRSDHKTEVCEE
DVPFELTFCSL

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family

Homologues:

Organism=Escherichia coli, GI1786291, Length=252, Percent_Identity=33.3333333333333, Blast_Score=140, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1046_NITEC (Q0AH80)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_747267.1
- ProteinModelPortal:   Q0AH80
- SMR:   Q0AH80
- STRING:   Q0AH80
- GeneID:   4273769
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_1046
- NMPDR:   fig|335283.3.peg.283
- eggNOG:   COG4582
- HOGENOM:   HBG432810
- OMA:   CYPTISG
- PhylomeDB:   Q0AH80
- ProtClustDB:   PRK05287
- BioCyc:   NEUT335283:NEUT_1046-MONOMER
- HAMAP:   MF_01092
- InterPro:   IPR009777

Pfam domain/function: PF07072 DUF1342

EC number: NA

Molecular weight: Translated: 28714; Mature: 28714

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICYELPLNERIRMLLRLEDLFDKIDFFSARDTSFEHHAALVALFEILDVTSRSDLKSDL
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
LQELDKQRTMLEGLQDNPGVSEKALIHILQDIRAAFRGLLDIPGRIGGHLRDDEWLMSVK
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHH
QRMSIPGGACEFDLPAYHYWLNMAPDARRADLQNWITPLTSIRSGINIILNILRNSGTKF
HHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
CYIAAKGVFQQAGSEHQAHLLCLHISDEISCIPEISANKYALNIRFIPWRSDHKTEVCEE
EEEEEHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHCC
DVPFELTFCSL
CCCEEEEEECC
>Mature Secondary Structure
MICYELPLNERIRMLLRLEDLFDKIDFFSARDTSFEHHAALVALFEILDVTSRSDLKSDL
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
LQELDKQRTMLEGLQDNPGVSEKALIHILQDIRAAFRGLLDIPGRIGGHLRDDEWLMSVK
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHH
QRMSIPGGACEFDLPAYHYWLNMAPDARRADLQNWITPLTSIRSGINIILNILRNSGTKF
HHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
CYIAAKGVFQQAGSEHQAHLLCLHISDEISCIPEISANKYALNIRFIPWRSDHKTEVCEE
EEEEEHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHCC
DVPFELTFCSL
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA