| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114330976
Identifier: 114330976
GI number: 114330976
Start: 1003613
End: 1004713
Strand: Direct
Name: 114330976
Synonym: Neut_0973
Alternate gene names: NA
Gene position: 1003613-1004713 (Clockwise)
Preceding gene: 114330970
Following gene: 114330977
Centisome position: 37.71
GC content: 49.05
Gene sequence:
>1101_bases ATGGGGCTGACTTTCGCTTCCCTGATCATGACCCAGCAACCTGCTATTTTTCTCGGACTGATGACCCGAACCTACAGTTT CATAACGGATGTGAGCTTGCCCGATATCTGGGTAATGGACTCTAAAGTACAATTTGTTGATGACATCAAACCTTTGCAGG ATACCGAGCTCTACCGGGTACGGGGAGTTTCCGGGGTGGAATGGGCGACGCCAATGTACAAGGGGCTATTGAGAGCTCGT CTGGCTAATGGCACATTTCAAAGCTGTTTCGTCGTCGGGTTGGATGATGCTACGCTCATCGGTGGTCCACCCATCATGCT GGAAGGCAACATCGAGGACTTGCGCCGCAGTGACGGCGTCATCGTTGATATTGATGGGGTGCGGGATAAACTTACAAGGC CATCACGTGAACCTGGCGGAAAATCAGTGCCCATCAAAGTCGGTGACAGTTTGGAGGTGAATGATCACCGGGCGGTCGTC GTCGGTATTGCAAAAATCTCGCGCACTTTCCAGGCGCAGCCTATTATTTATACGACGTATTCGCGGGCAAAAAGTTATGC GCCACGAGAGCGAAAACTGCTTTCCTTCATTCTGGTCAAGGCAAAATCCGGACAGGATTTTTCCATGCTAACCCGTCGCA TACGCGAATCCACCGGCTTGGCTGCCTACACTCGTCAGGAATTTATGGATCTGACCTACGACTATTTCATGAAGAATACG GGCATTCCGATTAATTTCGGGATTTCGGTGCTGTTGGGATTTATGGTGGGCGCAGCCATTGCCGGGCAAACTTTTTATAA TTTCACGTTGGATAACTTGCGCCAGTTTGGTGTGCTGAAAGCCATGGGGACCAGTAATAGAACTTTGCTAAAAATGATTT TGCTCCAGGCCATTCTGGTGGGAAGCATCGGTTACGGGCTCGGTGTAGGTTCAACCGCGTTGTTTGGCTATTTCATGCAC GATACCATACTTGCATTCAAATTTACTTGGCAACTGCTGATTTTTAGTGGTGTGGGAATTGGCCTTATCTGTATATTTGC TGCGGTCATCAGCATACTCAAGGTGATCCGTCTGGAACCTGCTGTTGTCTTCAAGAGTTAA
Upstream 100 bases:
>100_bases TTAACTATTTTTATAGGGCCGTGCCAAGCACTGGCAATCCATGTATCACATCGCGTTGAAAATGCTGACGGGGGACAGGG GAAAGTATCTGGGTATCATT
Downstream 100 bases:
>100_bases TGAGCGTACATACGCTGGCAGTGCGTTGCCGGAATATCGTTAAAGTCTATGAGACTGGTGGCCAAAAAGTGACCGCTCTT GATGGTATTGATCTTGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC Transporter Permease Protein; DevC-Like ABC Transporter Permease Protein; ABC Transporter Permease Component; ABC-Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; ABC-Transporter DevC-Like-Protein; Glycolipid ABC Exporter Inner Membrane Subunit; ABC-Type Export System Membrane Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC-Type Transport System Permease Component
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MGLTFASLIMTQQPAIFLGLMTRTYSFITDVSLPDIWVMDSKVQFVDDIKPLQDTELYRVRGVSGVEWATPMYKGLLRAR LANGTFQSCFVVGLDDATLIGGPPIMLEGNIEDLRRSDGVIVDIDGVRDKLTRPSREPGGKSVPIKVGDSLEVNDHRAVV VGIAKISRTFQAQPIIYTTYSRAKSYAPRERKLLSFILVKAKSGQDFSMLTRRIRESTGLAAYTRQEFMDLTYDYFMKNT GIPINFGISVLLGFMVGAAIAGQTFYNFTLDNLRQFGVLKAMGTSNRTLLKMILLQAILVGSIGYGLGVGSTALFGYFMH DTILAFKFTWQLLIFSGVGIGLICIFAAVISILKVIRLEPAVVFKS
Sequences:
>Translated_366_residues MGLTFASLIMTQQPAIFLGLMTRTYSFITDVSLPDIWVMDSKVQFVDDIKPLQDTELYRVRGVSGVEWATPMYKGLLRAR LANGTFQSCFVVGLDDATLIGGPPIMLEGNIEDLRRSDGVIVDIDGVRDKLTRPSREPGGKSVPIKVGDSLEVNDHRAVV VGIAKISRTFQAQPIIYTTYSRAKSYAPRERKLLSFILVKAKSGQDFSMLTRRIRESTGLAAYTRQEFMDLTYDYFMKNT GIPINFGISVLLGFMVGAAIAGQTFYNFTLDNLRQFGVLKAMGTSNRTLLKMILLQAILVGSIGYGLGVGSTALFGYFMH DTILAFKFTWQLLIFSGVGIGLICIFAAVISILKVIRLEPAVVFKS >Mature_365_residues GLTFASLIMTQQPAIFLGLMTRTYSFITDVSLPDIWVMDSKVQFVDDIKPLQDTELYRVRGVSGVEWATPMYKGLLRARL ANGTFQSCFVVGLDDATLIGGPPIMLEGNIEDLRRSDGVIVDIDGVRDKLTRPSREPGGKSVPIKVGDSLEVNDHRAVVV GIAKISRTFQAQPIIYTTYSRAKSYAPRERKLLSFILVKAKSGQDFSMLTRRIRESTGLAAYTRQEFMDLTYDYFMKNTG IPINFGISVLLGFMVGAAIAGQTFYNFTLDNLRQFGVLKAMGTSNRTLLKMILLQAILVGSIGYGLGVGSTALFGYFMHD TILAFKFTWQLLIFSGVGIGLICIFAAVISILKVIRLEPAVVFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40441; Mature: 40310
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTFASLIMTQQPAIFLGLMTRTYSFITDVSLPDIWVMDSKVQFVDDIKPLQDTELYRV CCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCCCEEEE RGVSGVEWATPMYKGLLRARLANGTFQSCFVVGLDDATLIGGPPIMLEGNIEDLRRSDGV CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCEEEECCHHHHHHCCCE IVDIDGVRDKLTRPSREPGGKSVPIKVGDSLEVNDHRAVVVGIAKISRTFQAQPIIYTTY EEEECCCHHHHCCCCCCCCCCCCCEEECCCEEECCCCEEEEEHHHHHHHHCCCCEEEEEH SRAKSYAPRERKLLSFILVKAKSGQDFSMLTRRIRESTGLAAYTRQEFMDLTYDYFMKNT HHHHCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GIPINFGISVLLGFMVGAAIAGQTFYNFTLDNLRQFGVLKAMGTSNRTLLKMILLQAILV CCCEEHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GSIGYGLGVGSTALFGYFMHDTILAFKFTWQLLIFSGVGIGLICIFAAVISILKVIRLEP HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC AVVFKS EEEECC >Mature Secondary Structure GLTFASLIMTQQPAIFLGLMTRTYSFITDVSLPDIWVMDSKVQFVDDIKPLQDTELYRV CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCCCEEEE RGVSGVEWATPMYKGLLRARLANGTFQSCFVVGLDDATLIGGPPIMLEGNIEDLRRSDGV CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCEEEECCHHHHHHCCCE IVDIDGVRDKLTRPSREPGGKSVPIKVGDSLEVNDHRAVVVGIAKISRTFQAQPIIYTTY EEEECCCHHHHCCCCCCCCCCCCCEEECCCEEECCCCEEEEEHHHHHHHHCCCCEEEEEH SRAKSYAPRERKLLSFILVKAKSGQDFSMLTRRIRESTGLAAYTRQEFMDLTYDYFMKNT HHHHCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GIPINFGISVLLGFMVGAAIAGQTFYNFTLDNLRQFGVLKAMGTSNRTLLKMILLQAILV CCCEEHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GSIGYGLGVGSTALFGYFMHDTILAFKFTWQLLIFSGVGIGLICIFAAVISILKVIRLEP HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC AVVFKS EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA