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The map label for this gene is nuoC

Identifier: 114330927

GI number: 114330927

Start: 949563

End: 950183

Strand: Direct

Name: nuoC

Synonym: Neut_0924

Alternate gene names: 114330927

Gene position: 949563-950183 (Clockwise)

Preceding gene: 114330926

Following gene: 114330928

Centisome position: 35.68

GC content: 38.16

Gene sequence:

>621_bases
ATGACAGATAGTCGCGTAGATAAACTTGCAACAAATTTACAGCAAGTACTGAGTGATCAGCAGGTTGATATGAGTCATGC
GTTAGGTGAGCTAACTATTTTAATTCATTCCCGAGATTTGCTGGGTATTGCTGAAACATTAAGAAACCATACTGATTTGG
CGTTTGATACGTTAGTTGATTTATGTGGCGTAGATTATAGCGAATATACGACAAATACGCATGCTGGATATAAGCGGGGT
GACAAGCGCTTTGCCGTGGTGTATCACTTGCTTTCCGTTAAGCATAATCACAGACTGCGGATACGTGTATTTGTAGACGA
TAATGAATTTCCCATGCTTGATTCAGTGATACATATATGGCCTTCAGCTAATTGGTATGAACGAGAGGCATTTGATCTGT
TCGGGATTGTTTTTAATAATCATCCAGATTTAAGAAGAATTCTTACAGATTATGGTTTTATAGGAAATCCATTTCGTAAA
GATTTTCCATTGTCGGGGCATATGGAAATGCAATATGATCCAGAGCAAAAACGAGTGATATATCAGCCTATTACTATTGA
GCCTCGTGAAATTACGCCATATATCATTCGCGAAGAACAATACGGTAAGGAAGAAACATGA

Upstream 100 bases:

>100_bases
GCCGGGTTGTCCTCCTACTGCAGAAGCTTTGCTTTATGGGATTATTCAGCTGCAGAATAAAATCTGGCGTACTAACACAA
TCGCGCGTTAGAGAATAAAA

Downstream 100 bases:

>100_bases
CACGCTCTATGATTAATCAGCGATCCTCACGAAGTTTTTGGGAAGGGTGTTTGTGAAATGGCTGATATTCGTAATTACAC
TATGAATTTTGGGCCGCAAC

Product: NADH dehydrogenase subunit C

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTDSRVDKLATNLQQVLSDQQVDMSHALGELTILIHSRDLLGIAETLRNHTDLAFDTLVDLCGVDYSEYTTNTHAGYKRG
DKRFAVVYHLLSVKHNHRLRIRVFVDDNEFPMLDSVIHIWPSANWYEREAFDLFGIVFNNHPDLRRILTDYGFIGNPFRK
DFPLSGHMEMQYDPEQKRVIYQPITIEPREITPYIIREEQYGKEET

Sequences:

>Translated_206_residues
MTDSRVDKLATNLQQVLSDQQVDMSHALGELTILIHSRDLLGIAETLRNHTDLAFDTLVDLCGVDYSEYTTNTHAGYKRG
DKRFAVVYHLLSVKHNHRLRIRVFVDDNEFPMLDSVIHIWPSANWYEREAFDLFGIVFNNHPDLRRILTDYGFIGNPFRK
DFPLSGHMEMQYDPEQKRVIYQPITIEPREITPYIIREEQYGKEET
>Mature_205_residues
TDSRVDKLATNLQQVLSDQQVDMSHALGELTILIHSRDLLGIAETLRNHTDLAFDTLVDLCGVDYSEYTTNTHAGYKRGD
KRFAVVYHLLSVKHNHRLRIRVFVDDNEFPMLDSVIHIWPSANWYEREAFDLFGIVFNNHPDLRRILTDYGFIGNPFRKD
FPLSGHMEMQYDPEQKRVIYQPITIEPREITPYIIREEQYGKEET

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family

Homologues:

Organism=Homo sapiens, GI4758788, Length=167, Percent_Identity=45.5089820359281, Blast_Score=155, Evalue=2e-38,
Organism=Escherichia coli, GI145693162, Length=135, Percent_Identity=35.5555555555556, Blast_Score=84, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71990788, Length=164, Percent_Identity=42.6829268292683, Blast_Score=139, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI32563621, Length=164, Percent_Identity=42.6829268292683, Blast_Score=139, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24656494, Length=167, Percent_Identity=43.7125748502994, Blast_Score=145, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NUOC_NITEC (Q0AHJ8)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_747149.1
- ProteinModelPortal:   Q0AHJ8
- SMR:   Q0AHJ8
- STRING:   Q0AHJ8
- GeneID:   4272803
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_0924
- NMPDR:   fig|335283.3.peg.1580
- eggNOG:   COG0852
- HOGENOM:   HBG727675
- OMA:   DFPVSGH
- ProtClustDB:   PRK06074
- BioCyc:   NEUT335283:NEUT_0924-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01357
- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581
- TIGRFAMs:   TIGR01961

Pfam domain/function: PF00329 Complex1_30kDa

EC number: =1.6.99.5

Molecular weight: Translated: 24157; Mature: 24025

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00542 COMPLEX1_30K

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSRVDKLATNLQQVLSDQQVDMSHALGELTILIHSRDLLGIAETLRNHTDLAFDTLVD
CCCHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHH
LCGVDYSEYTTNTHAGYKRGDKRFAVVYHLLSVKHNHRLRIRVFVDDNEFPMLDSVIHIW
HHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHC
PSANWYEREAFDLFGIVFNNHPDLRRILTDYGFIGNPFRKDFPLSGHMEMQYDPEQKRVI
CCCCCCHHHHHHEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEE
YQPITIEPREITPYIIREEQYGKEET
ECCCEECCCCCCCEEEECHHCCCCCC
>Mature Secondary Structure 
TDSRVDKLATNLQQVLSDQQVDMSHALGELTILIHSRDLLGIAETLRNHTDLAFDTLVD
CCHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHH
LCGVDYSEYTTNTHAGYKRGDKRFAVVYHLLSVKHNHRLRIRVFVDDNEFPMLDSVIHIW
HHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHC
PSANWYEREAFDLFGIVFNNHPDLRRILTDYGFIGNPFRKDFPLSGHMEMQYDPEQKRVI
CCCCCCHHHHHHEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEE
YQPITIEPREITPYIIREEQYGKEET
ECCCEECCCCCCCEEEECHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA