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The map label for this gene is yqaA [H]

Identifier: 114330837

GI number: 114330837

Start: 846080

End: 846499

Strand: Reverse

Name: yqaA [H]

Synonym: Neut_0830

Alternate gene names: 114330837

Gene position: 846499-846080 (Counterclockwise)

Preceding gene: 114330841

Following gene: 114330832

Centisome position: 31.81

GC content: 51.9

Gene sequence:

>420_bases
ATGGATGAAAGCGCCAGCTTGTTAGCACTTTTTACCAGCAGTTTTCTTGCCGCAACGTTATTACCCGGAGGATCCGAGGC
TGTGCTTGTCGGGGTATTGATCGCCTACCCGGATCTGTTCTGGCCAGCGCTGAATGTTGCCACGCTGGGAAATACATTAG
GAGGACTGAGTTCTTACGTGATTGGTCGTTTTCTGCCCGATGAGCAGGCTTTGTCAAAAAAGCTTGGCCGCCATGTTCAT
GGGCTGGAATGGACACGTCGCCGTGGAGCACCCATACTATTCCTGTCCTGGTTGCCACTCATCGGCGACATATTATGTGT
GGCTGCCGGATGGCTGCGGATCAACTGGGCCTCCGCAGCATTTTTTATTGCTATCGGAAAATTTGCACGCTACTGGGTAA
TCGCTGCAGCAATCAGTTAG

Upstream 100 bases:

>100_bases
GATGGTAAACTGATGCAATAGTAAGTATGTAGCTTGCAGATATTTACTGTAATGCCTTCAGATCAACCATCTGTTACAAA
GAAACCACACTACTGTCTAT

Downstream 100 bases:

>100_bases
AAATTCACAAGCAATCGAATTTACTTTTCCAGCAGTTTTTTCAGTTCACCATTCTGAAACATCTCAGCCATGATATCCGA
TCCACCAACAAACTCCCCGT

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDESASLLALFTSSFLAATLLPGGSEAVLVGVLIAYPDLFWPALNVATLGNTLGGLSSYVIGRFLPDEQALSKKLGRHVH
GLEWTRRRGAPILFLSWLPLIGDILCVAAGWLRINWASAAFFIAIGKFARYWVIAAAIS

Sequences:

>Translated_139_residues
MDESASLLALFTSSFLAATLLPGGSEAVLVGVLIAYPDLFWPALNVATLGNTLGGLSSYVIGRFLPDEQALSKKLGRHVH
GLEWTRRRGAPILFLSWLPLIGDILCVAAGWLRINWASAAFFIAIGKFARYWVIAAAIS
>Mature_139_residues
MDESASLLALFTSSFLAATLLPGGSEAVLVGVLIAYPDLFWPALNVATLGNTLGGLSSYVIGRFLPDEQALSKKLGRHVH
GLEWTRRRGAPILFLSWLPLIGDILCVAAGWLRINWASAAFFIAIGKFARYWVIAAAIS

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=137, Percent_Identity=47.4452554744526, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 14973; Mature: 14973

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDESASLLALFTSSFLAATLLPGGSEAVLVGVLIAYPDLFWPALNVATLGNTLGGLSSYV
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRFLPDEQALSKKLGRHVHGLEWTRRRGAPILFLSWLPLIGDILCVAAGWLRINWASAA
HHHCCCCHHHHHHHHCCHHCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHEEEHHHHH
FFIAIGKFARYWVIAAAIS
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDESASLLALFTSSFLAATLLPGGSEAVLVGVLIAYPDLFWPALNVATLGNTLGGLSSYV
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRFLPDEQALSKKLGRHVHGLEWTRRRGAPILFLSWLPLIGDILCVAAGWLRINWASAA
HHHCCCCHHHHHHHHCCHHCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHEEEHHHHH
FFIAIGKFARYWVIAAAIS
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]