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The map label for this gene is flhC [H]

Identifier: 114330745

GI number: 114330745

Start: 744636

End: 745211

Strand: Direct

Name: flhC [H]

Synonym: Neut_0730

Alternate gene names: 114330745

Gene position: 744636-745211 (Clockwise)

Preceding gene: 114330744

Following gene: 114330746

Centisome position: 27.98

GC content: 45.49

Gene sequence:

>576_bases
ATGAAAGTGAAAAGTATTTTATCCGAAGGTAAACAGATTCAGCTTGCCACTGAATTGGTCCGGCTGGGTGCAAGGCTGCA
AGTGCTCGAAGTATCTACCACACTCAGTCGCGAACGACTTGTGAAGCTGTATAAGGAAGTTAAAGGTGTTTCTCCTCCCA
AAGGTATGCTTCCCTATTCCGAGGACTGGTTTACAGGTTGGCAGCCTAACATGCATTCATCATTATTCATCAATATTTAC
AATTACATTACCCAGTACACGAATGTTCGGGACATTGATGCCATTATCAAGAGCTATCAGCTGTATCTGGAACATATCGA
GGTTAACCACCTGCAGTGTATATTGAGTTTCACACGCGCATGGACATTGGTGCGTTTTGTGGAGAGTAAGGTGCTTTCTG
TTACATCCTGCGTTAAATGTACCGGGAATTTCCTGGTTCACAGCCTGGATATTCAATCCAACCATGTATGCGGGCTTTGT
CATGTTCCTTCACGTGCTGGTAAAACTAAGCGAGCAGCTGCGCAGAAGGCCAAAGAGGCTCAGGAAGTTGAGATCAGAGA
AGCGTGTGCGGTCTGA

Upstream 100 bases:

>100_bases
AACAGGATCGCGCACTGACACAATCCCACGCTGCAATACTCATGGCAGGGCAACCTGCTGAAAAAATTTCCTGAGCACCC
GTATAGAGGAGGAAGTAATC

Downstream 100 bases:

>100_bases
TATCTTTTTACAGCGTTTTCTGATCCGGTTTCATTGATTTTCCACAAATAGTCAGCACTTGGTTTCCCTGAATGGAGCCA
GGTGCTTTACTTCAAGATCA

Product: transcriptional activator FlhC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKVKSILSEGKQIQLATELVRLGARLQVLEVSTTLSRERLVKLYKEVKGVSPPKGMLPYSEDWFTGWQPNMHSSLFINIY
NYITQYTNVRDIDAIIKSYQLYLEHIEVNHLQCILSFTRAWTLVRFVESKVLSVTSCVKCTGNFLVHSLDIQSNHVCGLC
HVPSRAGKTKRAAAQKAKEAQEVEIREACAV

Sequences:

>Translated_191_residues
MKVKSILSEGKQIQLATELVRLGARLQVLEVSTTLSRERLVKLYKEVKGVSPPKGMLPYSEDWFTGWQPNMHSSLFINIY
NYITQYTNVRDIDAIIKSYQLYLEHIEVNHLQCILSFTRAWTLVRFVESKVLSVTSCVKCTGNFLVHSLDIQSNHVCGLC
HVPSRAGKTKRAAAQKAKEAQEVEIREACAV
>Mature_191_residues
MKVKSILSEGKQIQLATELVRLGARLQVLEVSTTLSRERLVKLYKEVKGVSPPKGMLPYSEDWFTGWQPNMHSSLFINIY
NYITQYTNVRDIDAIIKSYQLYLEHIEVNHLQCILSFTRAWTLVRFVESKVLSVTSCVKCTGNFLVHSLDIQSNHVCGLC
HVPSRAGKTKRAAAQKAKEAQEVEIREACAV

Specific function: Transcriptional activator. Together with flhD it acts as a compound sigma factor that activates class 2 flagellar genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flhC family [H]

Homologues:

Organism=Escherichia coli, GI1788201, Length=177, Percent_Identity=49.1525423728814, Blast_Score=186, Evalue=6e-49,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007944
- ProDom:   PD016592 [H]

Pfam domain/function: PF05280 FlhC [H]

EC number: NA

Molecular weight: Translated: 21670; Mature: 21670

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKSILSEGKQIQLATELVRLGARLQVLEVSTTLSRERLVKLYKEVKGVSPPKGMLPYS
CCCHHHHCCCCEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EDWFTGWQPNMHSSLFINIYNYITQYTNVRDIDAIIKSYQLYLEHIEVNHLQCILSFTRA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTLVRFVESKVLSVTSCVKCTGNFLVHSLDIQSNHVCGLCHVPSRAGKTKRAAAQKAKEA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHH
QEVEIREACAV
HHHHHHHHHCC
>Mature Secondary Structure
MKVKSILSEGKQIQLATELVRLGARLQVLEVSTTLSRERLVKLYKEVKGVSPPKGMLPYS
CCCHHHHCCCCEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EDWFTGWQPNMHSSLFINIYNYITQYTNVRDIDAIIKSYQLYLEHIEVNHLQCILSFTRA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTLVRFVESKVLSVTSCVKCTGNFLVHSLDIQSNHVCGLCHVPSRAGKTKRAAAQKAKEA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHH
QEVEIREACAV
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9287017 [H]