| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114330716
Identifier: 114330716
GI number: 114330716
Start: 706189
End: 707904
Strand: Direct
Name: 114330716
Synonym: Neut_0701
Alternate gene names: NA
Gene position: 706189-707904 (Clockwise)
Preceding gene: 114330715
Following gene: 114330722
Centisome position: 26.54
GC content: 51.17
Gene sequence:
>1716_bases ATGCCTATTTCAAAATTCATATTGGTCGGCTGTATGCTGACAGTTGCCGGGATTCCCAGTGCATTTGCGCATACCGGTCA TGGCGGCAACGAGATGCCTGCCACATACGGACAGGAATCTGCTGTACCGACGACGGATGAATCGCTGGCGGACGAACGGC AAGCCTCGGCACTCCTGAATCTCGGCACACATACCTTCCCGGTCAGTACACAAAACAAGCTGGCGCAACAATTCATCAAT CAGGGAATTAATCTTGCCTACGGCTTCAATCATGCGGAAGCCGGTCGTGCATTCAAGGAGGCAGCCCGCCTGGATCCCGG GCTGGCAATGGCCTATTGGGGACAAGCACTGGTGCTGGGCCCCAATATCAATGCAGCAATGGATGCCGGTGAAGAATCGT TGGCGGTGAAGCTGATCAATCAGGCTAAATCACTCATGACCACAGCGTCGCCGAAAGAGCAGGCACTGATACAAGCACTG GAAAAACGCTATTCAGACATGGCCGAAGCACGTAAAGTCAACGATAAAGCGTATGCGGATGCCATGCGTGAGGTGCATCA TCAGTTCCCGGATGATCCGGATATTGCCATGCTGTATGTAGAATCCACCATGGATCTTCGCCCTTGGGGCTACTGGATGC GGGATGGTTACCCGTTTGAAGGGACAAATGAAATTGTCGCATTGACTGAAGATATGTTGCGTCGCTACCCGAACCATCCG GGGGCGCTGCACATGTATATTCATCTGATGGAGCCCACCTCCAATCCAGAACGAGCTGAACAGGCAGCGGATAAATTGCT GACACTGATGCCACAAGCCGGACACATGATTCACATGGCTTCACATATCTATCAACGTGTAGGCCGCTATGCAGATGCTG TAAAAAGTAATCAGATGGCGATCAAGGCGGATGAGGAATATATCGCACAGTTCAAGGCGCAAGGGCTGTACCCGGTGGTG TACTATCCACATAACATTCATTTCCTCTGGTTCGCGGCTTCAGCTAGCGGTCAGTATGCACTGGCACTTAAAAGTGCTCG TGACGCAGCCAGTAAAGTGGATGATAAGTTACTGAGTCAAATGCCTTTTACTGCAATTTTCCGGGTCTTGCCTTACTGGA CACTTGCCCGATTTGGCCAATGGCAAAGCGTACTTGCTGAACCGGCTCCGCCTGCGGATAACGCCTTTCTCACAGGAAGC TGGCATTATGTGCGTGGCCTGGCCTATATAGCGATGGGACAATTACAACAGGCCGGGATGGAATTAGCGCAATTGCACAA AATTGTAAAAGATCCTTCACTTAATACCCCGTTGCTTTCTCAAAATACGGCGTACAACGTATTGCGAATCGCCCCTGAAG TACTGGCAGGCGAACTCGCCGCTGCACATGGAAAACTTGATGTCGCCATTGCCCACCTGGAACGGGCAGTCCGACTTGAG GATGGCCTAGTCTATACAGAACCTGCTGAATGGCATTATCCACCACGGTTGGCATTAGGAGCGATTCTACTGGAAGCAGA TCGTCCCGATGAAGCGGAGACCGTATACTGGGAAGATCTGCGGCGCAACCGCGATAATGGTTGGGCACTGTTTGGTTTGC AGCAAGCTTTACGTGCTCAAAACAAAACAGTAGAAGCAGATGTGATCAAGGCCCGTTTCCAAAAAGCATGGGAACATGCA GATATCCCACTCTCTGCTTCACGTATGGGATGGTAA
Upstream 100 bases:
>100_bases GGGCGTGAGCTTTCCCGGTGGGGATTGAGAGAATTTGTCAATATCAAGACCATTAACGTTTATGATAGCTAGAGATAAAA ACCATACAGGAGAGACTCAC
Downstream 100 bases:
>100_bases AACGGGGTAAAGATTAGCGTGAGTGGCTGTAGCTCACGCTAGGAGTGGTGGGTAAACAGGCTTTATCTATAATCATCCAG GACTGAACACTTAATGGCTG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; Tetratricopeptide Region; Redoxin Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 571; Mature: 570
Protein sequence:
>571_residues MPISKFILVGCMLTVAGIPSAFAHTGHGGNEMPATYGQESAVPTTDESLADERQASALLNLGTHTFPVSTQNKLAQQFIN QGINLAYGFNHAEAGRAFKEAARLDPGLAMAYWGQALVLGPNINAAMDAGEESLAVKLINQAKSLMTTASPKEQALIQAL EKRYSDMAEARKVNDKAYADAMREVHHQFPDDPDIAMLYVESTMDLRPWGYWMRDGYPFEGTNEIVALTEDMLRRYPNHP GALHMYIHLMEPTSNPERAEQAADKLLTLMPQAGHMIHMASHIYQRVGRYADAVKSNQMAIKADEEYIAQFKAQGLYPVV YYPHNIHFLWFAASASGQYALALKSARDAASKVDDKLLSQMPFTAIFRVLPYWTLARFGQWQSVLAEPAPPADNAFLTGS WHYVRGLAYIAMGQLQQAGMELAQLHKIVKDPSLNTPLLSQNTAYNVLRIAPEVLAGELAAAHGKLDVAIAHLERAVRLE DGLVYTEPAEWHYPPRLALGAILLEADRPDEAETVYWEDLRRNRDNGWALFGLQQALRAQNKTVEADVIKARFQKAWEHA DIPLSASRMGW
Sequences:
>Translated_571_residues MPISKFILVGCMLTVAGIPSAFAHTGHGGNEMPATYGQESAVPTTDESLADERQASALLNLGTHTFPVSTQNKLAQQFIN QGINLAYGFNHAEAGRAFKEAARLDPGLAMAYWGQALVLGPNINAAMDAGEESLAVKLINQAKSLMTTASPKEQALIQAL EKRYSDMAEARKVNDKAYADAMREVHHQFPDDPDIAMLYVESTMDLRPWGYWMRDGYPFEGTNEIVALTEDMLRRYPNHP GALHMYIHLMEPTSNPERAEQAADKLLTLMPQAGHMIHMASHIYQRVGRYADAVKSNQMAIKADEEYIAQFKAQGLYPVV YYPHNIHFLWFAASASGQYALALKSARDAASKVDDKLLSQMPFTAIFRVLPYWTLARFGQWQSVLAEPAPPADNAFLTGS WHYVRGLAYIAMGQLQQAGMELAQLHKIVKDPSLNTPLLSQNTAYNVLRIAPEVLAGELAAAHGKLDVAIAHLERAVRLE DGLVYTEPAEWHYPPRLALGAILLEADRPDEAETVYWEDLRRNRDNGWALFGLQQALRAQNKTVEADVIKARFQKAWEHA DIPLSASRMGW >Mature_570_residues PISKFILVGCMLTVAGIPSAFAHTGHGGNEMPATYGQESAVPTTDESLADERQASALLNLGTHTFPVSTQNKLAQQFINQ GINLAYGFNHAEAGRAFKEAARLDPGLAMAYWGQALVLGPNINAAMDAGEESLAVKLINQAKSLMTTASPKEQALIQALE KRYSDMAEARKVNDKAYADAMREVHHQFPDDPDIAMLYVESTMDLRPWGYWMRDGYPFEGTNEIVALTEDMLRRYPNHPG ALHMYIHLMEPTSNPERAEQAADKLLTLMPQAGHMIHMASHIYQRVGRYADAVKSNQMAIKADEEYIAQFKAQGLYPVVY YPHNIHFLWFAASASGQYALALKSARDAASKVDDKLLSQMPFTAIFRVLPYWTLARFGQWQSVLAEPAPPADNAFLTGSW HYVRGLAYIAMGQLQQAGMELAQLHKIVKDPSLNTPLLSQNTAYNVLRIAPEVLAGELAAAHGKLDVAIAHLERAVRLED GLVYTEPAEWHYPPRLALGAILLEADRPDEAETVYWEDLRRNRDNGWALFGLQQALRAQNKTVEADVIKARFQKAWEHAD IPLSASRMGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63468; Mature: 63337
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISKFILVGCMLTVAGIPSAFAHTGHGGNEMPATYGQESAVPTTDESLADERQASALLN CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LGTHTFPVSTQNKLAQQFINQGINLAYGFNHAEAGRAFKEAARLDPGLAMAYWGQALVLG CCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCEEEEC PNINAAMDAGEESLAVKLINQAKSLMTTASPKEQALIQALEKRYSDMAEARKVNDKAYAD CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AMREVHHQFPDDPDIAMLYVESTMDLRPWGYWMRDGYPFEGTNEIVALTEDMLRRYPNHP HHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC GALHMYIHLMEPTSNPERAEQAADKLLTLMPQAGHMIHMASHIYQRVGRYADAVKSNQMA CEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE IKADEEYIAQFKAQGLYPVVYYPHNIHFLWFAASASGQYALALKSARDAASKVDDKLLSQ EECCHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHH MPFTAIFRVLPYWTLARFGQWQSVLAEPAPPADNAFLTGSWHYVRGLAYIAMGQLQQAGM CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH ELAQLHKIVKDPSLNTPLLSQNTAYNVLRIAPEVLAGELAAAHGKLDVAIAHLERAVRLE HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DGLVYTEPAEWHYPPRLALGAILLEADRPDEAETVYWEDLRRNRDNGWALFGLQQALRAQ CCEEEECCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHC NKTVEADVIKARFQKAWEHADIPLSASRMGW CCCHHHHHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure PISKFILVGCMLTVAGIPSAFAHTGHGGNEMPATYGQESAVPTTDESLADERQASALLN CHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LGTHTFPVSTQNKLAQQFINQGINLAYGFNHAEAGRAFKEAARLDPGLAMAYWGQALVLG CCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCEEEEC PNINAAMDAGEESLAVKLINQAKSLMTTASPKEQALIQALEKRYSDMAEARKVNDKAYAD CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AMREVHHQFPDDPDIAMLYVESTMDLRPWGYWMRDGYPFEGTNEIVALTEDMLRRYPNHP HHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC GALHMYIHLMEPTSNPERAEQAADKLLTLMPQAGHMIHMASHIYQRVGRYADAVKSNQMA CEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE IKADEEYIAQFKAQGLYPVVYYPHNIHFLWFAASASGQYALALKSARDAASKVDDKLLSQ EECCHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHH MPFTAIFRVLPYWTLARFGQWQSVLAEPAPPADNAFLTGSWHYVRGLAYIAMGQLQQAGM CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH ELAQLHKIVKDPSLNTPLLSQNTAYNVLRIAPEVLAGELAAAHGKLDVAIAHLERAVRLE HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DGLVYTEPAEWHYPPRLALGAILLEADRPDEAETVYWEDLRRNRDNGWALFGLQQALRAQ CCEEEECCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHC NKTVEADVIKARFQKAWEHADIPLSASRMGW CCCHHHHHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA