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The map label for this gene is yibN [H]

Identifier: 114330671

GI number: 114330671

Start: 666516

End: 666998

Strand: Direct

Name: yibN [H]

Synonym: Neut_0656

Alternate gene names: 114330671

Gene position: 666516-666998 (Clockwise)

Preceding gene: 114330667

Following gene: 114330672

Centisome position: 25.05

GC content: 46.38

Gene sequence:

>483_bases
ATGGAGTTTCGCGAGTACTTTGTTAAAATAACGATTTTTAGCGGGTTCGGATACATTCTGGATACATCTATGGAATCAAC
TTTTCTGGTAGACAATATGTTTTTTATCGTGGCGGCAATGCTGAGTGGTGGCATGCTGCTATGGCCGGTGGTTGCACGTA
ACTCCGTCCGTGATATTGGTACAAAGCAGGCGATCCGGTTGATTAATTATGAAGATGCTCTGGTGCTGGATGTCAGAGAT
GAAGGTGAGTATGCCGGTGGTCATCCGCCCAATGCTGCCCATATTCCGGTGGAGCAGATAGAAGAACGTTGGCAGGAGCT
GGAAAGATTCAAGGATAAACCTGTTGTTATCATCTTTACGCCAGGGCTGCGACCGGGGCGAGCTGGTTCCGTTTTGCGCA
AAAATGGTTTTAAACAGGTTTTTAATCTATCTGGTGGCATTGAAACCTGGCAGCGTGAGAATCTTCCATTGGTGAAAAAG
TGA

Upstream 100 bases:

>100_bases
ACTGGCATGAATGAGAGTCTGTAAGAAAAAACGTTATCGTAACCTATCCCGCAGGAAATCGCCGGGTTGCCTGGAATTAT
TCCATTATCTAAAACTATGA

Downstream 100 bases:

>100_bases
TGGATGATAACGGCGCGGAAAGAGACAAAATGCCCAAGGTAGTGATGTATGTATCCGGATTTTGCCCCTATTGCACCATG
GCAGAAAAATTGTTGCGTGC

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MEFREYFVKITIFSGFGYILDTSMESTFLVDNMFFIVAAMLSGGMLLWPVVARNSVRDIGTKQAIRLINYEDALVLDVRD
EGEYAGGHPPNAAHIPVEQIEERWQELERFKDKPVVIIFTPGLRPGRAGSVLRKNGFKQVFNLSGGIETWQRENLPLVKK

Sequences:

>Translated_160_residues
MEFREYFVKITIFSGFGYILDTSMESTFLVDNMFFIVAAMLSGGMLLWPVVARNSVRDIGTKQAIRLINYEDALVLDVRD
EGEYAGGHPPNAAHIPVEQIEERWQELERFKDKPVVIIFTPGLRPGRAGSVLRKNGFKQVFNLSGGIETWQRENLPLVKK
>Mature_160_residues
MEFREYFVKITIFSGFGYILDTSMESTFLVDNMFFIVAAMLSGGMLLWPVVARNSVRDIGTKQAIRLINYEDALVLDVRD
EGEYAGGHPPNAAHIPVEQIEERWQELERFKDKPVVIIFTPGLRPGRAGSVLRKNGFKQVFNLSGGIETWQRENLPLVKK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=107, Percent_Identity=39.2523364485981, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 18207; Mature: 18207

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFREYFVKITIFSGFGYILDTSMESTFLVDNMFFIVAAMLSGGMLLWPVVARNSVRDIG
CCCHHEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHCCCHHHCC
TKQAIRLINYEDALVLDVRDEGEYAGGHPPNAAHIPVEQIEERWQELERFKDKPVVIIFT
HHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
PGLRPGRAGSVLRKNGFKQVFNLSGGIETWQRENLPLVKK
CCCCCCCCCCHHHHCCHHHHHHCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MEFREYFVKITIFSGFGYILDTSMESTFLVDNMFFIVAAMLSGGMLLWPVVARNSVRDIG
CCCHHEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHCCCHHHCC
TKQAIRLINYEDALVLDVRDEGEYAGGHPPNAAHIPVEQIEERWQELERFKDKPVVIIFT
HHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
PGLRPGRAGSVLRKNGFKQVFNLSGGIETWQRENLPLVKK
CCCCCCCCCCHHHHCCHHHHHHCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]