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The map label for this gene is hsdM [C]

Identifier: 114330559

GI number: 114330559

Start: 565215

End: 566843

Strand: Reverse

Name: hsdM [C]

Synonym: Neut_0541

Alternate gene names: 114330559

Gene position: 566843-565215 (Counterclockwise)

Preceding gene: 114330560

Following gene: 114330558

Centisome position: 21.3

GC content: 63.41

Gene sequence:

>1629_bases
ATGGTTAAATCCAATAACAACAAAACCACCGATCATCTCGGCTTTGAAGCTGAGCTTTTCAAGGCTGCCGACAAGCTGCG
CGGCAACATGGAACCCAGCGACTACAAGCACGTCGCTTTGGGGCTGATCTTCCTCAAATACATTTCCGACGCCTTCGAGG
CTCGCCATGCGGAGCTAGCGGCCGAAAGTGCAGCAGCCGCCGAAGATAAAGACGAGTACCTCGCGGACAACATCTTCTGG
GTACCCAAGGAGGGACGCTGGTCACACCTCAAGGCCAACGCCAAACGCCCTGAAATCGGCACCCTGATCGACGACGCCAT
GCGCGCCATCGAGAAGGACAACGAATCCCTCAAGGGCGTGCTACCCAAGGACTACGCCCGCCCGGCGCTGAACAAGGTGA
TGCTGGGCGAGCTGATCGACCTGATCTCGGGCATCGCCATGAACGAGGGCGGCGACAAATCGAAAGACGTGCTTGGCCGG
GTCTACGAATACTTCCTCAGCCAGTTCGCCGGCGCCGAAGGCAAGCGCGGCGGCGAGTTCTACACCCCGCGCTCGGTGGT
ACAGGTGCTGGTGCAGATGCTCGAACCCTACGCCGGTCGCGTCTACGACCCCTGCTGCGGCAGCGGTGGCATGTTCGTGC
AGAGCGAGAAGTTCGTACTGGAGCACGGCGGCCGCATTGGCGACATCGCCATCTACGGCCAGGAGAGCAACTACACCACC
TGGCGCCTGGCCAAGATGAACCTTGCCGTGCGCGGCATCGACTCCGATATCCGCTGGAACAACGAAGGCAGCTTTCACAA
GGACGAGCTGCGCGACCTGCGCTTCGACCACATCCTCGCCAACCCGCCCTTCAACATCTCCGACTGGGGCGGCGACCGCC
TGCGCGAAGACCCGCGCTGGCAATTCGGCGTGCCGCCCGTGGGCAACGCCAACTACGCCTGGCTGCAGCACATCCACTGG
CACCTGGCCCCCTTTGGCACCGCCGGCGTGGTGCTGGCCAACGGCTCCATGAGCTCCAACCAGAGCGGCGAAGGCGAAAT
CCGCAAGGCCATGGTGGAAGCCGACGCCGTGGACTGCATGGTTACCCTGCCGGGGCAGTTGTTCTACTCCACGCAGATCC
CCGCCTGCTTGTGGTTCCTGGCTCGTGACAAATCCAACGGCAAGCGCGGCTCTCTATCAAAAGGCGGGGAGACTCTGCGC
GACCGGCGCGGCGAGGTGCTGTTTATCGACGCCCGAAACATGGGCACGCTGGTGGACCGCACCCGGCGCGAACTTACCGA
CGAGGACATCCAGAAGATCGCCGACACCTACCATGCCTGGCGCGGCGAGAAGGTAGCGGGCGACGCACAGGGAAGTGCTA
GTGTCGCGGGAGGCAGGATGCCGGGAGCGACCCAGTACGCGGACATCCCCGGCTTCTGCAAGGCCGCCACGCTGGAAGAA
ATCCGCAAGCACGGCCATGTGCTCACCCCCGGCCGCTACGTCGGCGCCGAAGCCGCCGAGGACGACGGTGAAGCCTTTGC
CGACAAGATGCAGCGGCTCAGCGCCCAGTGGCGCGAGCAGCAGCAGGAAGCGGCGCGGCTGGATGTCGAAATTGAGGCCA
ACCTGAGGGAGCTTGGGTATGGGGGGTGA

Upstream 100 bases:

>100_bases
GCTGGCACTATCGGGAGTAGAGAATGCCAGGCGCGCTCCGAGGCAGCGATCGCCAGCAGCTAAAGCCACAAGCAAATAGA
AAAGAACAAGGAAATACCCA

Downstream 100 bases:

>100_bases
ATTCCATCCACTTACGCTTGGGGCCGTATGCTCCAAGATTGGCAGCGGCGCAACTCCTCGTGGCGGCAAGGAGGCGTATC
GCGGCGGAGCTACGTCATTG

Product: N-6 DNA methylase

Products: NA

Alternate protein names: M.HindVIIP [H]

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MVKSNNNKTTDHLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHAELAAESAAAAEDKDEYLADNIFW
VPKEGRWSHLKANAKRPEIGTLIDDAMRAIEKDNESLKGVLPKDYARPALNKVMLGELIDLISGIAMNEGGDKSKDVLGR
VYEYFLSQFAGAEGKRGGEFYTPRSVVQVLVQMLEPYAGRVYDPCCGSGGMFVQSEKFVLEHGGRIGDIAIYGQESNYTT
WRLAKMNLAVRGIDSDIRWNNEGSFHKDELRDLRFDHILANPPFNISDWGGDRLREDPRWQFGVPPVGNANYAWLQHIHW
HLAPFGTAGVVLANGSMSSNQSGEGEIRKAMVEADAVDCMVTLPGQLFYSTQIPACLWFLARDKSNGKRGSLSKGGETLR
DRRGEVLFIDARNMGTLVDRTRRELTDEDIQKIADTYHAWRGEKVAGDAQGSASVAGGRMPGATQYADIPGFCKAATLEE
IRKHGHVLTPGRYVGAEAAEDDGEAFADKMQRLSAQWREQQQEAARLDVEIEANLRELGYGG

Sequences:

>Translated_542_residues
MVKSNNNKTTDHLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHAELAAESAAAAEDKDEYLADNIFW
VPKEGRWSHLKANAKRPEIGTLIDDAMRAIEKDNESLKGVLPKDYARPALNKVMLGELIDLISGIAMNEGGDKSKDVLGR
VYEYFLSQFAGAEGKRGGEFYTPRSVVQVLVQMLEPYAGRVYDPCCGSGGMFVQSEKFVLEHGGRIGDIAIYGQESNYTT
WRLAKMNLAVRGIDSDIRWNNEGSFHKDELRDLRFDHILANPPFNISDWGGDRLREDPRWQFGVPPVGNANYAWLQHIHW
HLAPFGTAGVVLANGSMSSNQSGEGEIRKAMVEADAVDCMVTLPGQLFYSTQIPACLWFLARDKSNGKRGSLSKGGETLR
DRRGEVLFIDARNMGTLVDRTRRELTDEDIQKIADTYHAWRGEKVAGDAQGSASVAGGRMPGATQYADIPGFCKAATLEE
IRKHGHVLTPGRYVGAEAAEDDGEAFADKMQRLSAQWREQQQEAARLDVEIEANLRELGYGG
>Mature_542_residues
MVKSNNNKTTDHLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHAELAAESAAAAEDKDEYLADNIFW
VPKEGRWSHLKANAKRPEIGTLIDDAMRAIEKDNESLKGVLPKDYARPALNKVMLGELIDLISGIAMNEGGDKSKDVLGR
VYEYFLSQFAGAEGKRGGEFYTPRSVVQVLVQMLEPYAGRVYDPCCGSGGMFVQSEKFVLEHGGRIGDIAIYGQESNYTT
WRLAKMNLAVRGIDSDIRWNNEGSFHKDELRDLRFDHILANPPFNISDWGGDRLREDPRWQFGVPPVGNANYAWLQHIHW
HLAPFGTAGVVLANGSMSSNQSGEGEIRKAMVEADAVDCMVTLPGQLFYSTQIPACLWFLARDKSNGKRGSLSKGGETLR
DRRGEVLFIDARNMGTLVDRTRRELTDEDIQKIADTYHAWRGEKVAGDAQGSASVAGGRMPGATQYADIPGFCKAATLEE
IRKHGHVLTPGRYVGAEAAEDDGEAFADKMQRLSAQWREQQQEAARLDVEIEANLRELGYGG

Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1790808, Length=439, Percent_Identity=23.2346241457859, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003356
- InterPro:   IPR002296 [H]

Pfam domain/function: PF02384 N6_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 60115; Mature: 60115

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSNNNKTTDHLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHAELA
CCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESAAAAEDKDEYLADNIFWVPKEGRWSHLKANAKRPEIGTLIDDAMRAIEKDNESLKGV
HHHHHCCCCHHHHHHCCEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCHHCCC
LPKDYARPALNKVMLGELIDLISGIAMNEGGDKSKDVLGRVYEYFLSQFAGAEGKRGGEF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
YTPRSVVQVLVQMLEPYAGRVYDPCCGSGGMFVQSEKFVLEHGGRIGDIAIYGQESNYTT
CCHHHHHHHHHHHHCHHCCCCCCCCCCCCCEEEECCHHHHHCCCCEEEEEEEECCCCCCE
WRLAKMNLAVRGIDSDIRWNNEGSFHKDELRDLRFDHILANPPFNISDWGGDRLREDPRW
EEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
QFGVPPVGNANYAWLQHIHWHLAPFGTAGVVLANGSMSSNQSGEGEIRKAMVEADAVDCM
EECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHEEE
VTLPGQLFYSTQIPACLWFLARDKSNGKRGSLSKGGETLRDRRGEVLFIDARNMGTLVDR
EECCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCHHHHH
TRRELTDEDIQKIADTYHAWRGEKVAGDAQGSASVAGGRMPGATQYADIPGFCKAATLEE
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IRKHGHVLTPGRYVGAEAAEDDGEAFADKMQRLSAQWREQQQEAARLDVEIEANLRELGY
HHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHCCC
GG
CC
>Mature Secondary Structure
MVKSNNNKTTDHLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHAELA
CCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESAAAAEDKDEYLADNIFWVPKEGRWSHLKANAKRPEIGTLIDDAMRAIEKDNESLKGV
HHHHHCCCCHHHHHHCCEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCHHCCC
LPKDYARPALNKVMLGELIDLISGIAMNEGGDKSKDVLGRVYEYFLSQFAGAEGKRGGEF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
YTPRSVVQVLVQMLEPYAGRVYDPCCGSGGMFVQSEKFVLEHGGRIGDIAIYGQESNYTT
CCHHHHHHHHHHHHCHHCCCCCCCCCCCCCEEEECCHHHHHCCCCEEEEEEEECCCCCCE
WRLAKMNLAVRGIDSDIRWNNEGSFHKDELRDLRFDHILANPPFNISDWGGDRLREDPRW
EEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
QFGVPPVGNANYAWLQHIHWHLAPFGTAGVVLANGSMSSNQSGEGEIRKAMVEADAVDCM
EECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHEEE
VTLPGQLFYSTQIPACLWFLARDKSNGKRGSLSKGGETLRDRRGEVLFIDARNMGTLVDR
EECCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCHHHHH
TRRELTDEDIQKIADTYHAWRGEKVAGDAQGSASVAGGRMPGATQYADIPGFCKAATLEE
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IRKHGHVLTPGRYVGAEAAEDDGEAFADKMQRLSAQWREQQQEAARLDVEIEANLRELGY
HHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHCCC
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]