Click here to switch to the map view.

The map label for this gene is yqgE [C]

Identifier: 114330468

GI number: 114330468

Start: 458794

End: 459354

Strand: Direct

Name: yqgE [C]

Synonym: Neut_0448

Alternate gene names: 114330468

Gene position: 458794-459354 (Clockwise)

Preceding gene: 114330467

Following gene: 114330469

Centisome position: 17.24

GC content: 47.42

Gene sequence:

>561_bases
ATGCAAGCCATCAACCTGACCGATCATTTTCTGATTGCTATGCCGAGATTGGAGGATTCATTCTTTGCCAAAACGTTAAC
CTATATTTGCGAGCATAATGAACAAGGTGCTTTGGGCCTGGTTGTGAATCGATCGACTGATTTATCGGTAGAAAAACTGC
TGACGCAATTAGGTATGTCCCCTCAGGATCCCGCTCTTTCCAATCTGCCGGTATTGTTGGGGGGTCCGGTGCAAGTCGAT
AACGGATTTGTATTGCACGAACCGGTTGGAGCATGGAGGTTTACGTTGTCTTCCAATGTGGTGACTGGTCTGACTGCTTC
TATTGATATTTTGCAAGCAGTTGCTGATTGTCAGGGGCCAGAGAAAATCCTGGTTGCACTTGGTTATTCAGGTTGGGCGG
CTGGGCAACTCGAACAGGAGCTGGCGCAGAATGCCTGGCTGACTGTACCCGCTCAATCCCGGATATTGTTTGAACTCTCT
TTTGAAGAGCGACTACCTGCTGCCATGAAATTGCTGGGGATTGATTTTTTCAATTTGTCCAATGAAGTTGGTCATGCCTG
A

Upstream 100 bases:

>100_bases
TGTGCCGATTAAAGCTGTCATGAAATTCAGCTCTGGAATCATGACACGTACTGCATACTGGGTATAGGTACGGTAAATTT
TTATAGATGTCACAATCGCA

Downstream 100 bases:

>100_bases
TTCTGCCGAAGAAACTATATCTGACATGGCAAGCGTTATTTTATCCGGCACTGTGCTTGCTTTCGATTTTGGTGTGCGAC
GTATAGGGGTGGCTATTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MQAINLTDHFLIAMPRLEDSFFAKTLTYICEHNEQGALGLVVNRSTDLSVEKLLTQLGMSPQDPALSNLPVLLGGPVQVD
NGFVLHEPVGAWRFTLSSNVVTGLTASIDILQAVADCQGPEKILVALGYSGWAAGQLEQELAQNAWLTVPAQSRILFELS
FEERLPAAMKLLGIDFFNLSNEVGHA

Sequences:

>Translated_186_residues
MQAINLTDHFLIAMPRLEDSFFAKTLTYICEHNEQGALGLVVNRSTDLSVEKLLTQLGMSPQDPALSNLPVLLGGPVQVD
NGFVLHEPVGAWRFTLSSNVVTGLTASIDILQAVADCQGPEKILVALGYSGWAAGQLEQELAQNAWLTVPAQSRILFELS
FEERLPAAMKLLGIDFFNLSNEVGHA
>Mature_186_residues
MQAINLTDHFLIAMPRLEDSFFAKTLTYICEHNEQGALGLVVNRSTDLSVEKLLTQLGMSPQDPALSNLPVLLGGPVQVD
NGFVLHEPVGAWRFTLSSNVVTGLTASIDILQAVADCQGPEKILVALGYSGWAAGQLEQELAQNAWLTVPAQSRILFELS
FEERLPAAMKLLGIDFFNLSNEVGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=187, Percent_Identity=42.2459893048128, Blast_Score=160, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y448_NITEC (Q0AIU6)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_746690.1
- ProteinModelPortal:   Q0AIU6
- SMR:   Q0AIU6
- STRING:   Q0AIU6
- GeneID:   4271912
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_0448
- NMPDR:   fig|335283.3.peg.1155
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- PhylomeDB:   Q0AIU6
- ProtClustDB:   CLSK585874
- BioCyc:   NEUT335283:NEUT_0448-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20189; Mature: 20189

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAINLTDHFLIAMPRLEDSFFAKTLTYICEHNEQGALGLVVNRSTDLSVEKLLTQLGMS
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCC
PQDPALSNLPVLLGGPVQVDNGFVLHEPVGAWRFTLSSNVVTGLTASIDILQAVADCQGP
CCCCCCCCCCEEECCCEEECCCEEEECCCCCEEEEECCCEEHHHHHHHHHHHHHHHCCCC
EKILVALGYSGWAAGQLEQELAQNAWLTVPAQSRILFELSFEERLPAAMKLLGIDFFNLS
CCEEEEECCCCCCCHHHHHHHHCCCEEEECCCCEEEEEECHHHHCHHHHHHHCCHHCCCC
NEVGHA
CCCCCC
>Mature Secondary Structure
MQAINLTDHFLIAMPRLEDSFFAKTLTYICEHNEQGALGLVVNRSTDLSVEKLLTQLGMS
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCC
PQDPALSNLPVLLGGPVQVDNGFVLHEPVGAWRFTLSSNVVTGLTASIDILQAVADCQGP
CCCCCCCCCCEEECCCEEECCCEEEECCCCCEEEEECCCEEHHHHHHHHHHHHHHHCCCC
EKILVALGYSGWAAGQLEQELAQNAWLTVPAQSRILFELSFEERLPAAMKLLGIDFFNLS
CCEEEEECCCCCCCHHHHHHHHCCCEEEECCCCEEEEEECHHHHCHHHHHHHCCHHCCCC
NEVGHA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA