| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114330172
Identifier: 114330172
GI number: 114330172
Start: 143602
End: 145170
Strand: Direct
Name: 114330172
Synonym: Neut_0141
Alternate gene names: NA
Gene position: 143602-145170 (Clockwise)
Preceding gene: 114330169
Following gene: 114330173
Centisome position: 5.4
GC content: 49.59
Gene sequence:
>1569_bases ATGAGAAAAATACTACCCGCCGGTATGTTGTATGTTGTTATGGTGTTACTCACAACCGCAGTATGTTTTGCAGGAAATAA AAGGGATGCTGCAGAAGGGCGCAATATCTGGTTCAACAGTACTTTTGGAGGAGAGCGCTTTTTTAGTCTTATCTTGCCTA ATGCTCCCTTCAATTTCCAGATTGGCTTTGATCATATGTTAACCTGGCCACGGGATAGTCGGTTTGATGAATACGGAGTT ATTAATGATCCGGATTGCACCCCGGGTGATGCGTCAACGGGCTATTTCGATCGATGTGCAGATCCTGAGTCCGCCGGTGT CATAGGAGTGCGAAAATTTCCAAACCCCTCAGGCGGCTCACCGCTTATAGGGATCACCTGTGCCGCTTGTCATGCCGGAT TTGATCCCGTTCATCCTCCTTCAAATCCAAATAATCCACAAGAAAGAAACATTCATCCTACTGTCGGAAACCAGTATCTG CGGATCGACAAGCTTTTTAAGAGCCATCTTTCGCCGCATGATCCTCGCTATCAAATCTTTTCCAGCTGGGCTCCCGGCAC TGTAGATACTACTTTACTGGAAAATGATCATATTAATAATCCGGGAACGATTACGCCGATCTGGTCACTACCCAATCGTC CATTCTTTAATGTGACCGCTGATGGTGAGCCTGCTCGCGTTCATCGTAACGGACAGGGAGGAGAAGATGATATCGGCTGT GAGCAGGCAGCGCTCCGAGTTTATTTCAACATTGGTATGTGCGCTGCAGAATGCATGGTTGGGCATCTTGCCAACGGACC TGGCGGGAGCCAAACGCCCATTAACCTTGCAGAATGCAGACAGGTCTGCCCAGAGCTCCTGCAAGCAGAAGAGTCGGTAG GCAAGCTCTGTGCGTTTCTGCAAACGCCACATGCTCCACGCCTGGTGCGTGCCCCGAAAGGCGCACATTATATTGATTGG AAGGTTGTAAGGAAGGGTCAGAAAGTCTTTTCTCAGGCATGCGAATCATGCCATTCCGATGGGAATCGTTCGTTAAGGCG AAATGTTCTCTCTGATGATCTGATTCATCCTTTCGCCGAGATTGGTACGAATAGCTGTCGTGCCCGCACGACTAACTGGA TGGGTGGCCATATCTGGGCCGTGTTTTCTTCAGATCAATATAAGGAACGACCGAACGGCGGACCAGGTTTTTACCGTGAC ATGCCTCTTGCAGGCATTTGGGCAACCGCTCCTTTTTTCCACAATAACAGGCTGGGCCAAAGCATCGGCGATCCGTCAGT GGCTGGTCGTATCACGGCATACGAGGATGCAATGGATCTGTTGCTGAATCCTGATAAGCGAGATGAGCCTGGTTCGATCC TGCGTACGACTGACCAGGTACAACTGCCAACCCCATCTGGTGTCGTTATGCTCCCTGCCGGGACTCCTGTTGCTCAATTT GCAAGCCTTGATCCCAGTACTGGCAAAAATCTCTGCCCGGATCTCTCTGAAAATCAGGGGCACTACTTTGGAACAGAACT TTCGGATGAAGATAAGTATGCGCTGATCGAATTTCTGAAGACCCGCTGA
Upstream 100 bases:
>100_bases AAATTCGGAACATCTTCTTCGGGCTTGACTTAGTTATTTCCATCTGTCATTTTTTACATATTCCCCAGATGTAATACTTG CTTTTAGGAAGGAGGACAGC
Downstream 100 bases:
>100_bases TGTCGGTTATTTTATGAGTTTCATATATGAAAAATATGATCACTCAATCCACCATTAGTTGCCCACATTGCGGACATAAA GAAACAGAGGAAATGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MRKILPAGMLYVVMVLLTTAVCFAGNKRDAAEGRNIWFNSTFGGERFFSLILPNAPFNFQIGFDHMLTWPRDSRFDEYGV INDPDCTPGDASTGYFDRCADPESAGVIGVRKFPNPSGGSPLIGITCAACHAGFDPVHPPSNPNNPQERNIHPTVGNQYL RIDKLFKSHLSPHDPRYQIFSSWAPGTVDTTLLENDHINNPGTITPIWSLPNRPFFNVTADGEPARVHRNGQGGEDDIGC EQAALRVYFNIGMCAAECMVGHLANGPGGSQTPINLAECRQVCPELLQAEESVGKLCAFLQTPHAPRLVRAPKGAHYIDW KVVRKGQKVFSQACESCHSDGNRSLRRNVLSDDLIHPFAEIGTNSCRARTTNWMGGHIWAVFSSDQYKERPNGGPGFYRD MPLAGIWATAPFFHNNRLGQSIGDPSVAGRITAYEDAMDLLLNPDKRDEPGSILRTTDQVQLPTPSGVVMLPAGTPVAQF ASLDPSTGKNLCPDLSENQGHYFGTELSDEDKYALIEFLKTR
Sequences:
>Translated_522_residues MRKILPAGMLYVVMVLLTTAVCFAGNKRDAAEGRNIWFNSTFGGERFFSLILPNAPFNFQIGFDHMLTWPRDSRFDEYGV INDPDCTPGDASTGYFDRCADPESAGVIGVRKFPNPSGGSPLIGITCAACHAGFDPVHPPSNPNNPQERNIHPTVGNQYL RIDKLFKSHLSPHDPRYQIFSSWAPGTVDTTLLENDHINNPGTITPIWSLPNRPFFNVTADGEPARVHRNGQGGEDDIGC EQAALRVYFNIGMCAAECMVGHLANGPGGSQTPINLAECRQVCPELLQAEESVGKLCAFLQTPHAPRLVRAPKGAHYIDW KVVRKGQKVFSQACESCHSDGNRSLRRNVLSDDLIHPFAEIGTNSCRARTTNWMGGHIWAVFSSDQYKERPNGGPGFYRD MPLAGIWATAPFFHNNRLGQSIGDPSVAGRITAYEDAMDLLLNPDKRDEPGSILRTTDQVQLPTPSGVVMLPAGTPVAQF ASLDPSTGKNLCPDLSENQGHYFGTELSDEDKYALIEFLKTR >Mature_522_residues MRKILPAGMLYVVMVLLTTAVCFAGNKRDAAEGRNIWFNSTFGGERFFSLILPNAPFNFQIGFDHMLTWPRDSRFDEYGV INDPDCTPGDASTGYFDRCADPESAGVIGVRKFPNPSGGSPLIGITCAACHAGFDPVHPPSNPNNPQERNIHPTVGNQYL RIDKLFKSHLSPHDPRYQIFSSWAPGTVDTTLLENDHINNPGTITPIWSLPNRPFFNVTADGEPARVHRNGQGGEDDIGC EQAALRVYFNIGMCAAECMVGHLANGPGGSQTPINLAECRQVCPELLQAEESVGKLCAFLQTPHAPRLVRAPKGAHYIDW KVVRKGQKVFSQACESCHSDGNRSLRRNVLSDDLIHPFAEIGTNSCRARTTNWMGGHIWAVFSSDQYKERPNGGPGFYRD MPLAGIWATAPFFHNNRLGQSIGDPSVAGRITAYEDAMDLLLNPDKRDEPGSILRTTDQVQLPTPSGVVMLPAGTPVAQF ASLDPSTGKNLCPDLSENQGHYFGTELSDEDKYALIEFLKTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57286; Mature: 57286
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKILPAGMLYVVMVLLTTAVCFAGNKRDAAEGRNIWFNSTFGGERFFSLILPNAPFNFQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHEEEEEECCCCCEEE IGFDHMLTWPRDSRFDEYGVINDPDCTPGDASTGYFDRCADPESAGVIGVRKFPNPSGGS ECHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC PLIGITCAACHAGFDPVHPPSNPNNPQERNIHPTVGNQYLRIDKLFKSHLSPHDPRYQIF CEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH SSWAPGTVDTTLLENDHINNPGTITPIWSLPNRPFFNVTADGEPARVHRNGQGGEDDIGC HCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCH EQAALRVYFNIGMCAAECMVGHLANGPGGSQTPINLAECRQVCPELLQAEESVGKLCAFL HHHEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QTPHAPRLVRAPKGAHYIDWKVVRKGQKVFSQACESCHSDGNRSLRRNVLSDDLIHPFAE HCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH IGTNSCRARTTNWMGGHIWAVFSSDQYKERPNGGPGFYRDMPLAGIWATAPFFHNNRLGQ HCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC SIGDPSVAGRITAYEDAMDLLLNPDKRDEPGSILRTTDQVQLPTPSGVVMLPAGTPVAQF CCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEECCCCEECCCCCCEEEEECCCCHHHH ASLDPSTGKNLCPDLSENQGHYFGTELSDEDKYALIEFLKTR HCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MRKILPAGMLYVVMVLLTTAVCFAGNKRDAAEGRNIWFNSTFGGERFFSLILPNAPFNFQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHEEEEEECCCCCEEE IGFDHMLTWPRDSRFDEYGVINDPDCTPGDASTGYFDRCADPESAGVIGVRKFPNPSGGS ECHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC PLIGITCAACHAGFDPVHPPSNPNNPQERNIHPTVGNQYLRIDKLFKSHLSPHDPRYQIF CEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH SSWAPGTVDTTLLENDHINNPGTITPIWSLPNRPFFNVTADGEPARVHRNGQGGEDDIGC HCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCH EQAALRVYFNIGMCAAECMVGHLANGPGGSQTPINLAECRQVCPELLQAEESVGKLCAFL HHHEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QTPHAPRLVRAPKGAHYIDWKVVRKGQKVFSQACESCHSDGNRSLRRNVLSDDLIHPFAE HCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH IGTNSCRARTTNWMGGHIWAVFSSDQYKERPNGGPGFYRDMPLAGIWATAPFFHNNRLGQ HCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC SIGDPSVAGRITAYEDAMDLLLNPDKRDEPGSILRTTDQVQLPTPSGVVMLPAGTPVAQF CCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEECCCCEECCCCCCEEEEECCCCHHHH ASLDPSTGKNLCPDLSENQGHYFGTELSDEDKYALIEFLKTR HCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA