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The map label for this gene is merD [H]

Identifier: 114330062

GI number: 114330062

Start: 32721

End: 32966

Strand: Reverse

Name: merD [H]

Synonym: Neut_0029

Alternate gene names: 114330062

Gene position: 32966-32721 (Counterclockwise)

Preceding gene: 114330063

Following gene: 114330061

Centisome position: 1.24

GC content: 63.01

Gene sequence:

>246_bases
ATGAGCGCCTACACAGTGTCCCGGCTGACCCTTGATGCGGGGGTGAGCGTGTATATCGTGCGCGACTATCTGCTGCGCGG
ATTGCTGCGGCCGGTCGCGTGCACCACGGGCGGCTATGGCTCATCTGCACAGCTTGCGGTGCTGCGTCAGCTCGTCGAAC
GTCGGCGCGAGGCGTTGGCCAGCTTGGAAATGCAATTAGCAGCCATGCCAACCGAGCCAGCACTGCACGCGGAGAGTTTG
CCATGA

Upstream 100 bases:

>100_bases
ATCTGACGATGGTCGAGGGGCTGAAGCTCGCGGCACAGACCTTTAGCAAGGACGTGAAGCAACTGTCCTGCTGCGCCGGA
TGAGGAAAAGGAGGTGCTCA

Downstream 100 bases:

>100_bases
ACAGCCCCGAGCGCTTGCCGTCTGAGACGCACAAACCGATCACCGGCTACCTGTGGGGCGTGCTGGCCGTGCTGACCTGT
CCCTGCTATTTGCCGATTCT

Product: transcriptional regulator, MerR family protein

Products: NA

Alternate protein names: Mercuric resistance protein merD [H]

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSAYTVSRLTLDAGVSVYIVRDYLLRGLLRPVACTTGGYGSSAQLAVLRQLVERRREALASLEMQLAAMPTEPALHAESL
P

Sequences:

>Translated_81_residues
MSAYTVSRLTLDAGVSVYIVRDYLLRGLLRPVACTTGGYGSSAQLAVLRQLVERRREALASLEMQLAAMPTEPALHAESL
P
>Mature_80_residues
SAYTVSRLTLDAGVSVYIVRDYLLRGLLRPVACTTGGYGSSAQLAVLRQLVERRREALASLEMQLAAMPTEPALHAESLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR011797 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8776; Mature: 8645

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYTVSRLTLDAGVSVYIVRDYLLRGLLRPVACTTGGYGSSAQLAVLRQLVERRREALA
CCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
SLEMQLAAMPTEPALHAESLP
HHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAYTVSRLTLDAGVSVYIVRDYLLRGLLRPVACTTGGYGSSAQLAVLRQLVERRREALA
CCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
SLEMQLAAMPTEPALHAESLP
HHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8302940; 9159519 [H]