Click here to switch to the map view.

The map label for this gene is 113970019

Identifier: 113970019

GI number: 113970019

Start: 1983791

End: 1986106

Strand: Direct

Name: 113970019

Synonym: Shewmr4_1679

Alternate gene names: NA

Gene position: 1983791-1986106 (Clockwise)

Preceding gene: 113970018

Following gene: 113970020

Centisome position: 42.15

GC content: 47.88

Gene sequence:

>2316_bases
ATGTTAGAAAAACTGGTCAACGGATTTGAGTCATTTTTATTCCGCAACCGTGCTTGGGTGGTGAGCATTTTTATTTTGCT
GACGGTTTTTTTGGGATACCAAGCTAGCCAATTAAAAATGGATGCGGCATTCATTAAAAATATTCCGCTTAATCATAGCT
ATATGCAAACCTACCTCAAACACCAAAAAGATTTTGGTGGGGCGAATAGCATTATGGTGGCGGTGGAAGATACCAGCGGC
AATATTTTTAACCCTAATTTTTTCGACACACTTAAAAATGTTCACGATCAGCTGTTTTTTATACCCGGTGTTGACCGCTC
ACAGGTGAAATCCTTATTTTCACCTTCGACCCGTTTTACCGAAGTCGTGGAAGATGGTTTCGCGGGCGGCCCTGTGATCC
CCGCTGATTTTACGACCACCGAAGCGGGTTTGAATACGGTGCGCGATAACATTGAAAAAGCAGGCATTGTGGGGCGCTTG
ATCGCCAACGATTATAGTGCCGCTATGGTGTCGGCTCAGTTGATGGACTTTGATCCACAAACGGGTAAGCCCTTAGATAC
CATCGCCTTTGCCGCTCAGCTGGAGAAGGAACTTCGCGGTAAGTATGAAACCGATAAGGTGAAAATCCATATTATCGGTT
TTGCTAAGATGGCGGGTGATGTGGCCGATGGCGCCAAAGGCGTATTGCTGTTCTTCGTGATTGCCATTTTGATCACTGCG
GTAATGGTCTATCTGTTTTCAAAGTCACTTATCCTGACCTTATTGCCATTAGTTTGTAGCTTAACGGCGGTGATTTGGCA
GCTGGGTTTACTGACGGTCATCGGTTTTGGCTTAGATCCTATGTCAATTCTGGTGCCGTTCCTCGTCTTTGCCATTGGAG
TGAGTCACGGGGTGCAGATGATCAACGCGGTCAGACGCCGCGTGATGGACGGACAAACCACTAAGGCGGCTTCGGCTTCT
GCGTTTCGCAGTTTATTGGTGCCAGGTGGGGTAGCGCTGCTCTCTGATACGGTTGGTTTTATCACACTGTTATCCATTGA
TATTGGTATTATTCGTGAGCTGGCCATTTCGGCCTCACTCGGCGTGGGCGTGATTATTTTCACTAACCTTATCCTCCTGC
CTTTAGTCATTTCTTTCACTGAACTCAAGGTTGCGCCACAGGGTGCACCGACCTCAGAGGAAGTCCGCGCCGAGGCAATT
TGGCGTTACCTTGCCAAATTTGCCACGCCTAAATACGCGATAGTGGTGATTGCGGCAACAGTCATCTTGTATTTTGCGGG
TCTGCAACAGGCGAATCAGATGAAAATTGGTGATCTGCAGGGCGGGGCGCCAGCTTTACACCAAGATTCACGCTACAACC
TGGACACCTTTTTTATTACGGACCACTTTTCTATCACCACGGATGTGATGACTGTGATTGTGGAAGCGAGCCCTGAGGCT
TGTACTTACCACGATATGCTGACGCAAATTGATGAGTTTGAATGGTTAGTACGTAATACCCCTGGCGTTGAATCGACGGT
TAGCTTGGCCTCAGTGGCCAAAAAAGTGAACGCGGGCTTTAACGAAGGCAATCCAAGATGGGAAGTGTTGCCGCGCACAA
CCGCAAGTTTAGTGCAGGCCATCGGCCAAATTCCAACCACCTCTGGTTTGTTGAATGGTGATTGTTCTGTGATGCCTGTG
TATCTGTTTATGAAAGATCACAAGGCAGAAACCATAGAGACTGTGGTCGCTAAGGTGAAAGCGGTCGCGGCCAAAATGGA
TAATGACAAGCTGCAATTTAAGCTGGCGTCTGGCCCTGTTGGGGTGATGGCGGCAACCAACGAAGCGGTAGCTGAAGCCC
AGTTGCCTATGATGATTTATGTGTATGGCGCGGTATTTGTGCTTTGCCTTATCAGCTTTAAGTCATTAAAAGCGACAGTC
GCGGTGATTATTCCGCTCTATGTGGTCTCTACACTAGCACAGGCGCTGATGACTCAACTTAATATTGGCTTAGCAGTCAG
TACCTTACCCGTTATTGCCCTAGGGGTAGGTATTGGGGTTGACTATGGTATTTATATCCTATCGACCATGTCGGCTAAGC
TTTCGAATGGTATGCCAGTACAGCAAGCTTATTATGAAGCATTAGTCGAGCGGGGCAGTGCGGTGATTTTCACTGGTTTG
ACCCTGGCGATTGGTGTGAGCACTTGGTTTTTCTCTGCGCTCAAGTTCCAAATGGACATGGGAATTCTGCTCACCTTCAT
GTTTGTGGTAAATATGTTGGGCGCCATAATTATCCTGCCAGCACTGGCAGCGGTATTCTGGCGGCAGGCTAAGTAG

Upstream 100 bases:

>100_bases
ATTGCCAAAGATAACCAAGGGAATGTGTGGTTATCGGGTAGCCAAGGGCTACTCACACTGAAGCCATAAATGATAAAACA
ACAATAACAGGGCCGATAAG

Downstream 100 bases:

>100_bases
TTACAAACAATGGGGAGTTTTTGACTCCCCATTGCCTTTGAATATAAACGCTGTTTTTTTGATTTTTTGCTCACCTGTTA
CCACATCTTTACGCTCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: RND Superfamily Exporter; Patched Family Protein; Exporter Of RND Superfamily Protein-Like Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Exporter Of RND Superfamily; Exporter Of RND Superfamily Protein; Inner Membrane Transporter; Transporter Protein; Polyketide Cyclase/Dehydrase; RND Family Multidrug Efflux Transporter; RND Superfamily Transporter; Mmpl Family; Exporter; Exporters Of RND Superfamily; RND Family Transporter; RND Family Efflux Transporter; Transporter RND Superfamily

Number of amino acids: Translated: 771; Mature: 771

Protein sequence:

>771_residues
MLEKLVNGFESFLFRNRAWVVSIFILLTVFLGYQASQLKMDAAFIKNIPLNHSYMQTYLKHQKDFGGANSIMVAVEDTSG
NIFNPNFFDTLKNVHDQLFFIPGVDRSQVKSLFSPSTRFTEVVEDGFAGGPVIPADFTTTEAGLNTVRDNIEKAGIVGRL
IANDYSAAMVSAQLMDFDPQTGKPLDTIAFAAQLEKELRGKYETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA
VMVYLFSKSLILTLLPLVCSLTAVIWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQMINAVRRRVMDGQTTKAASAS
AFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASLGVGVIIFTNLILLPLVISFTELKVAPQGAPTSEEVRAEAI
WRYLAKFATPKYAIVVIAATVILYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEASPEA
CTYHDMLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQAIGQIPTTSGLLNGDCSVMPV
YLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPVGVMAATNEAVAEAQLPMMIYVYGAVFVLCLISFKSLKATV
AVIIPLYVVSTLAQALMTQLNIGLAVSTLPVIALGVGIGVDYGIYILSTMSAKLSNGMPVQQAYYEALVERGSAVIFTGL
TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQAK

Sequences:

>Translated_771_residues
MLEKLVNGFESFLFRNRAWVVSIFILLTVFLGYQASQLKMDAAFIKNIPLNHSYMQTYLKHQKDFGGANSIMVAVEDTSG
NIFNPNFFDTLKNVHDQLFFIPGVDRSQVKSLFSPSTRFTEVVEDGFAGGPVIPADFTTTEAGLNTVRDNIEKAGIVGRL
IANDYSAAMVSAQLMDFDPQTGKPLDTIAFAAQLEKELRGKYETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA
VMVYLFSKSLILTLLPLVCSLTAVIWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQMINAVRRRVMDGQTTKAASAS
AFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASLGVGVIIFTNLILLPLVISFTELKVAPQGAPTSEEVRAEAI
WRYLAKFATPKYAIVVIAATVILYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEASPEA
CTYHDMLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQAIGQIPTTSGLLNGDCSVMPV
YLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPVGVMAATNEAVAEAQLPMMIYVYGAVFVLCLISFKSLKATV
AVIIPLYVVSTLAQALMTQLNIGLAVSTLPVIALGVGIGVDYGIYILSTMSAKLSNGMPVQQAYYEALVERGSAVIFTGL
TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQAK
>Mature_771_residues
MLEKLVNGFESFLFRNRAWVVSIFILLTVFLGYQASQLKMDAAFIKNIPLNHSYMQTYLKHQKDFGGANSIMVAVEDTSG
NIFNPNFFDTLKNVHDQLFFIPGVDRSQVKSLFSPSTRFTEVVEDGFAGGPVIPADFTTTEAGLNTVRDNIEKAGIVGRL
IANDYSAAMVSAQLMDFDPQTGKPLDTIAFAAQLEKELRGKYETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA
VMVYLFSKSLILTLLPLVCSLTAVIWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQMINAVRRRVMDGQTTKAASAS
AFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASLGVGVIIFTNLILLPLVISFTELKVAPQGAPTSEEVRAEAI
WRYLAKFATPKYAIVVIAATVILYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEASPEA
CTYHDMLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQAIGQIPTTSGLLNGDCSVMPV
YLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPVGVMAATNEAVAEAQLPMMIYVYGAVFVLCLISFKSLKATV
AVIIPLYVVSTLAQALMTQLNIGLAVSTLPVIALGVGIGVDYGIYILSTMSAKLSNGMPVQQAYYEALVERGSAVIFTGL
TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQAK

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83433; Mature: 83433

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKLVNGFESFLFRNRAWVVSIFILLTVFLGYQASQLKMDAAFIKNIPLNHSYMQTYLK
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
HQKDFGGANSIMVAVEDTSGNIFNPNFFDTLKNVHDQLFFIPGVDRSQVKSLFSPSTRFT
HHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCEEECCCCCHHHHHHHHCCCHHHH
EVVEDGFAGGPVIPADFTTTEAGLNTVRDNIEKAGIVGRLIANDYSAAMVSAQLMDFDPQ
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
TGKPLDTIAFAAQLEKELRGKYETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHH
VMVYLFSKSLILTLLPLVCSLTAVIWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
INAVRRRVMDGQTTKAASASAFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASL
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVGVIIFTNLILLPLVISFTELKVAPQGAPTSEEVRAEAIWRYLAKFATPKYAIVVIAAT
CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VILYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEASPEA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEECCCCC
CTYHDMLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHH
IGQIPTTSGLLNGDCSVMPVYLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPV
HHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE
GVMAATNEAVAEAQLPMMIYVYGAVFVLCLISFKSLKATVAVIIPLYVVSTLAQALMTQL
EEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIGLAVSTLPVIALGVGIGVDYGIYILSTMSAKLSNGMPVQQAYYEALVERGSAVIFTGL
HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEHH
TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEKLVNGFESFLFRNRAWVVSIFILLTVFLGYQASQLKMDAAFIKNIPLNHSYMQTYLK
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
HQKDFGGANSIMVAVEDTSGNIFNPNFFDTLKNVHDQLFFIPGVDRSQVKSLFSPSTRFT
HHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCEEECCCCCHHHHHHHHCCCHHHH
EVVEDGFAGGPVIPADFTTTEAGLNTVRDNIEKAGIVGRLIANDYSAAMVSAQLMDFDPQ
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
TGKPLDTIAFAAQLEKELRGKYETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHH
VMVYLFSKSLILTLLPLVCSLTAVIWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
INAVRRRVMDGQTTKAASASAFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASL
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVGVIIFTNLILLPLVISFTELKVAPQGAPTSEEVRAEAIWRYLAKFATPKYAIVVIAAT
CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VILYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEASPEA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEECCCCC
CTYHDMLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHH
IGQIPTTSGLLNGDCSVMPVYLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPV
HHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE
GVMAATNEAVAEAQLPMMIYVYGAVFVLCLISFKSLKATVAVIIPLYVVSTLAQALMTQL
EEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIGLAVSTLPVIALGVGIGVDYGIYILSTMSAKLSNGMPVQQAYYEALVERGSAVIFTGL
HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEHH
TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA