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The map label for this gene is 113970018

Identifier: 113970018

GI number: 113970018

Start: 1982749

End: 1983759

Strand: Direct

Name: 113970018

Synonym: Shewmr4_1678

Alternate gene names: NA

Gene position: 1982749-1983759 (Clockwise)

Preceding gene: 113970017

Following gene: 113970019

Centisome position: 42.13

GC content: 49.75

Gene sequence:

>1011_bases
ATGTCGTTTCGCATCCTTCAATGCGCCGCTGCAATCAGTGTTGGTTGTTTATTTTCTTCCCCTTCATTTTCTGCGGTGTC
TGAGACTTTCCCGCAAATTCAGCCCTTAGCGGCATCTTCTTTAGTGTTAGATATTGCCCATGCTGGGCAGCGTTTGGTCG
CCGTGGGCGAGCGTGGGCATGTGCTCGTGCTGAATGACACCTGGCAACAAGTGCCTACACCAACCTCGGCGCAGCTGACA
AAAGTGTTCTTTTTAAATGAAAAACTCGGTTGGGCAGTGGGGCACGATGCCACTATTTTGCACACCCAAGATGGCGGCCA
GACATGGTCGTTACAAATACAGTCGAGCGAAATTGAAAAACCCTTCCTCGATGTGCTGTTTCTCAATGAGCAGGACGGCA
TGGCCATTGGGGCTTATGGACTGTTTTATCGAACCCATGATGGCGGCAAGACCTGGGCGGAAGAATTCCACGAAGAGTTG
CTGGCCGAAGAAGACGTGTCCTATTTGGCTGAGTTAAAGAATAGCGACCAAGCCGCTTATTTGACCGAGCGCGCCTCGTT
ACTGCCGCATTTTAATCGGATGATCGTGCTCAATGATGGTCGTTTGTTATTAGTCGGAGAGCTTGGGCTTGTGGCGGTGT
CGGCCGATAAAGGCCAAAGCTTTACCCGTACGGGGTTTGATTACGACGGCTCTATGTTCAATGCCATTCAATTGCAGGAT
GCGGTCTATGTAATGGGACTGAGGGGCCATGTGTTTAAAGCAGATTTGAGCCTTAGCCAATGGGATGAGATTGAAATGCC
TGTGCAATCATCCATCAATGGCGCCTTGGTGAACTCAGATACAAGCTTGTACCTTGTGGGGAATGCCGGCGTTGTTATCC
AGCTAAATCAGGATGATAGTGCGAGTATTGTCACTCGTCGCCAGGGGGAAAACTTAGTTTCGATTGCCAAAGATAACCAA
GGGAATGTGTGGTTATCGGGTAGCCAAGGGCTACTCACACTGAAGCCATAA

Upstream 100 bases:

>100_bases
AGCGAACTTCACCCCAGACGCGCTGCGTCGCGAAGGTATCCGTTAATCAGCCACGGTATAAAGGGGCGCTAAGCGCCCCT
CATTAGTTAAGGAAGTTTGT

Downstream 100 bases:

>100_bases
ATGATAAAACAACAATAACAGGGCCGATAAGATGTTAGAAAAACTGGTCAACGGATTTGAGTCATTTTTATTCCGCAACC
GTGCTTGGGTGGTGAGCATT

Product: BNR repeat-containing protein

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; BNR/Asp-Box Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase BNR Repeat Protein; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Protein; BNR/Asp-Box Repeat Domain Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Protein Related Photosystem II Stability/Assembly Factor; Oxidoreductase; BNR Repeat Protein

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSFRILQCAAAISVGCLFSSPSFSAVSETFPQIQPLAASSLVLDIAHAGQRLVAVGERGHVLVLNDTWQQVPTPTSAQLT
KVFFLNEKLGWAVGHDATILHTQDGGQTWSLQIQSSEIEKPFLDVLFLNEQDGMAIGAYGLFYRTHDGGKTWAEEFHEEL
LAEEDVSYLAELKNSDQAAYLTERASLLPHFNRMIVLNDGRLLLVGELGLVAVSADKGQSFTRTGFDYDGSMFNAIQLQD
AVYVMGLRGHVFKADLSLSQWDEIEMPVQSSINGALVNSDTSLYLVGNAGVVIQLNQDDSASIVTRRQGENLVSIAKDNQ
GNVWLSGSQGLLTLKP

Sequences:

>Translated_336_residues
MSFRILQCAAAISVGCLFSSPSFSAVSETFPQIQPLAASSLVLDIAHAGQRLVAVGERGHVLVLNDTWQQVPTPTSAQLT
KVFFLNEKLGWAVGHDATILHTQDGGQTWSLQIQSSEIEKPFLDVLFLNEQDGMAIGAYGLFYRTHDGGKTWAEEFHEEL
LAEEDVSYLAELKNSDQAAYLTERASLLPHFNRMIVLNDGRLLLVGELGLVAVSADKGQSFTRTGFDYDGSMFNAIQLQD
AVYVMGLRGHVFKADLSLSQWDEIEMPVQSSINGALVNSDTSLYLVGNAGVVIQLNQDDSASIVTRRQGENLVSIAKDNQ
GNVWLSGSQGLLTLKP
>Mature_335_residues
SFRILQCAAAISVGCLFSSPSFSAVSETFPQIQPLAASSLVLDIAHAGQRLVAVGERGHVLVLNDTWQQVPTPTSAQLTK
VFFLNEKLGWAVGHDATILHTQDGGQTWSLQIQSSEIEKPFLDVLFLNEQDGMAIGAYGLFYRTHDGGKTWAEEFHEELL
AEEDVSYLAELKNSDQAAYLTERASLLPHFNRMIVLNDGRLLLVGELGLVAVSADKGQSFTRTGFDYDGSMFNAIQLQDA
VYVMGLRGHVFKADLSLSQWDEIEMPVQSSINGALVNSDTSLYLVGNAGVVIQLNQDDSASIVTRRQGENLVSIAKDNQG
NVWLSGSQGLLTLKP

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36621; Mature: 36490

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRILQCAAAISVGCLFSSPSFSAVSETFPQIQPLAASSLVLDIAHAGQRLVAVGERGH
CCEEHHHHHHHHEEEEEECCCCCHHHHHHCCCCCCCCHHHHEEEHHHCCCEEEEECCCCC
VLVLNDTWQQVPTPTSAQLTKVFFLNEKLGWAVGHDATILHTQDGGQTWSLQIQSSEIEK
EEEECCCHHHCCCCCCCEEEEEEEEECCCCEEECCCEEEEEECCCCEEEEEEEECCCCCC
PFLDVLFLNEQDGMAIGAYGLFYRTHDGGKTWAEEFHEELLAEEDVSYLAELKNSDQAAY
CEEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEH
LTERASLLPHFNRMIVLNDGRLLLVGELGLVAVSADKGQSFTRTGFDYDGSMFNAIQLQD
HHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEECCCCCCEEECCCCCCCCEEEEEEECC
AVYVMGLRGHVFKADLSLSQWDEIEMPVQSSINGALVNSDTSLYLVGNAGVVIQLNQDDS
EEEEEECCCEEEEECCCCCCCCCCCCCHHHCCCCEEEECCCEEEEEECCCEEEEECCCCC
ASIVTRRQGENLVSIAKDNQGNVWLSGSQGLLTLKP
CEEEEECCCCCEEEEEECCCCCEEEECCCCEEEECC
>Mature Secondary Structure 
SFRILQCAAAISVGCLFSSPSFSAVSETFPQIQPLAASSLVLDIAHAGQRLVAVGERGH
CEEHHHHHHHHEEEEEECCCCCHHHHHHCCCCCCCCHHHHEEEHHHCCCEEEEECCCCC
VLVLNDTWQQVPTPTSAQLTKVFFLNEKLGWAVGHDATILHTQDGGQTWSLQIQSSEIEK
EEEECCCHHHCCCCCCCEEEEEEEEECCCCEEECCCEEEEEECCCCEEEEEEEECCCCCC
PFLDVLFLNEQDGMAIGAYGLFYRTHDGGKTWAEEFHEELLAEEDVSYLAELKNSDQAAY
CEEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEH
LTERASLLPHFNRMIVLNDGRLLLVGELGLVAVSADKGQSFTRTGFDYDGSMFNAIQLQD
HHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEECCCCCCEEECCCCCCCCEEEEEEECC
AVYVMGLRGHVFKADLSLSQWDEIEMPVQSSINGALVNSDTSLYLVGNAGVVIQLNQDDS
EEEEEECCCEEEEECCCCCCCCCCCCCHHHCCCCEEEECCCEEEEEECCCEEEEECCCCC
ASIVTRRQGENLVSIAKDNQGNVWLSGSQGLLTLKP
CEEEEECCCCCEEEEEECCCCCEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA