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The map label for this gene is slyA [C]

Identifier: 113969936

GI number: 113969936

Start: 1888030

End: 1888461

Strand: Direct

Name: slyA [C]

Synonym: Shewmr4_1595

Alternate gene names: 113969936

Gene position: 1888030-1888461 (Clockwise)

Preceding gene: 113969935

Following gene: 113969937

Centisome position: 40.12

GC content: 48.84

Gene sequence:

>432_bases
TTGAACCGTTATGAAAGCTTAGGCTATCTTGTTTCCCACTTGAATATTGAGCTGCAAAATGAGCTCGATTTACAGTTGAA
ACGCTATCAGCTCGACATTAAGTTGTGGCCAGTGTTGTTCGCGCTTTGGCAGGAGGAGGGGATTACTCAGACCGAGTTGT
CTAAGCGTTGTGATGTGGCGAACTATACCATGACCCGTCTGCTCGATCAGTTGCAGGTGCAGGGTCTCATCACTCGCCAT
CAAGAGCTCGATAATCGCAGAGCTTTCCAGATTTTTCTCACCGATGAGGCCAAGGCGCTGGAGCAGGATTTGATCCGCGA
GGCCGAGCGCGTCAATGAAAAATACTTGTCCAATCTCACTGAAGAGGAACGCCAGCAGTTTATGCGCTTACTCAATAAGA
TAAACCGCTTACCGTCACTGGCTGCGTTGTGA

Upstream 100 bases:

>100_bases
TATTAGCGGTTAAGTGGTAGTATTAAAACTGACCTTGGCCAATCCTGCTCGGGTATCGGTCAGTGTCGATGGGTCTAAAT
GTTGTTTTCGGAGGTGCTGT

Downstream 100 bases:

>100_bases
TATCAGGCGTTCAACTCGCTTTCGCAAACCTCATGTGCATCACCTCATTGTTTTTCATTTCTATAACATTTTCATTAGTT
TCAGGGTATTGACTTACGAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator MarR; Transcription Regulator Protein; Regulatory Protein MarR

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNRYESLGYLVSHLNIELQNELDLQLKRYQLDIKLWPVLFALWQEEGITQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLTEEERQQFMRLLNKINRLPSLAAL

Sequences:

>Translated_143_residues
MNRYESLGYLVSHLNIELQNELDLQLKRYQLDIKLWPVLFALWQEEGITQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLTEEERQQFMRLLNKINRLPSLAAL
>Mature_143_residues
MNRYESLGYLVSHLNIELQNELDLQLKRYQLDIKLWPVLFALWQEEGITQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLTEEERQQFMRLLNKINRLPSLAAL

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17065; Mature: 17065

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRYESLGYLVSHLNIELQNELDLQLKRYQLDIKLWPVLFALWQEEGITQTELSKRCDVA
CCCHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
NYTMTRLLDQLQVQGLITRHQELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLT
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
EEERQQFMRLLNKINRLPSLAAL
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRYESLGYLVSHLNIELQNELDLQLKRYQLDIKLWPVLFALWQEEGITQTELSKRCDVA
CCCHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
NYTMTRLLDQLQVQGLITRHQELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLT
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
EEERQQFMRLLNKINRLPSLAAL
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA