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The map label for this gene is rpfG [H]

Identifier: 113969852

GI number: 113969852

Start: 1776765

End: 1777970

Strand: Direct

Name: rpfG [H]

Synonym: Shewmr4_1510

Alternate gene names: 113969852

Gene position: 1776765-1777970 (Clockwise)

Preceding gene: 113969851

Following gene: 113969853

Centisome position: 37.75

GC content: 48.42

Gene sequence:

>1206_bases
GTGGCAAAAGCAGCACAACGAAAATTATTACTTTCCGAACTTCAACTTGGCATGAGAGTCAAGTTGCCTTTGTCATGGAC
GAATCACCCTTTTTTATTTAACCGTGTGGATATCAGTAGTCCGGCTCACATTGAAATGATCCGCGGACTCGGTGTGCCCT
ATGTGTATCTGATTTCAGGTAACAGCGATGAACTCGAATCGATAGATGAAGATGAAGAAGTCGAGGAGATTGAAGAAGCG
CCACCGGAGCGTGACTTGAAGGCCGATACCCGTAAGGCGATGCGTTTAAGCCAAAGACGATTTTTAGAGAGCGTCAACCA
GTGCCGTAATGTGTATGGCAAAGTCGTGAGCGACCCAGAAGGCGCTTATCGCTTATCCGCCGCACTGGTCGAAGATTTAC
TCAGCCATCTACAAGAAGTCGAAAAACCTTTCCTCACCTTAGTCGGAATGGATGAAAAAGAGGTCAGTGTGACTCAGCAT
GGCATCTCGGTAGCAGTATTAGCCATGATGATAGGCCAAGCTCTCGACTTGCCAGCGCGGGATCTGCGTGATATTGCCTT
GGGGAGCTTATTTCACGATATAGGTAAACTCAAAGTCCCCGATGTGATCCGCCGTAAACGGGGGGCACTCACTCCCCATG
AGGCTAATTACCTACAGATGCACCCCAACTTTGGCTATGACATGCTGAATCGCTCGGGACTCTTTCCAAAGGAAGTGCTG
AATATTGTGTTGCATCACCATGAGTTTATCGATGGTTCAGGTTTTCCCGATGGGCTGACTGGAGCCAAAATCCCCATTAC
CACTCAAATAGTGAGTCTGGCGAACGATTACGATCAGCAGCTTAGTGGTCAGCAGGCGTCCTCACCGCAGGTGGCATTAG
GTTATTTATTTAAAAACCGAGCGAGTAAGCATGCCGAATCCTTAATTGCAGTATTGGTTAAGATTTTAGGCATCTATCCG
CCCGGCACTATCGTCAAGCTGTCCGACGACACTGTCGCTAAGGTGATCATGACCACTAAAGAGGTGAGTCAACCGCAGGT
GTGGGCCTGTAAGGAAGATGGCAGCGAGGCCTCGTTACGCTTTTTAAGTGATGAAGGGGTGACAGTACAAAAGACCATTC
GCGCGGAGGAGTTAACCGAGGGCGCGATCCGCACCTTGCAAATGGATAAAGGCATTAGTTTTTATTTTAGCTCGTTCCAA
GCTTGA

Upstream 100 bases:

>100_bases
ATTTTGTTGAATCATCTATAGTTATATGTACTTAGCTTAAATGTACGACTAAAGAAGCAAAGATTTACGCTTCTTGTGTA
CATGAAAGGAGTCATATTGC

Downstream 100 bases:

>100_bases
ATCCCTGCGCCAGAGTTCCGTATGCTATTGGCCGAAATACCTTGGGGTGACGGTCAAAGGAAATGGAGTTGAGTGTGGTA
AATCAAAAAAGTGTTGCGGT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MAKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDISSPAHIEMIRGLGVPYVYLISGNSDELESIDEDEEVEEIEEA
PPERDLKADTRKAMRLSQRRFLESVNQCRNVYGKVVSDPEGAYRLSAALVEDLLSHLQEVEKPFLTLVGMDEKEVSVTQH
GISVAVLAMMIGQALDLPARDLRDIALGSLFHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFGYDMLNRSGLFPKEVL
NIVLHHHEFIDGSGFPDGLTGAKIPITTQIVSLANDYDQQLSGQQASSPQVALGYLFKNRASKHAESLIAVLVKILGIYP
PGTIVKLSDDTVAKVIMTTKEVSQPQVWACKEDGSEASLRFLSDEGVTVQKTIRAEELTEGAIRTLQMDKGISFYFSSFQ
A

Sequences:

>Translated_401_residues
MAKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDISSPAHIEMIRGLGVPYVYLISGNSDELESIDEDEEVEEIEEA
PPERDLKADTRKAMRLSQRRFLESVNQCRNVYGKVVSDPEGAYRLSAALVEDLLSHLQEVEKPFLTLVGMDEKEVSVTQH
GISVAVLAMMIGQALDLPARDLRDIALGSLFHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFGYDMLNRSGLFPKEVL
NIVLHHHEFIDGSGFPDGLTGAKIPITTQIVSLANDYDQQLSGQQASSPQVALGYLFKNRASKHAESLIAVLVKILGIYP
PGTIVKLSDDTVAKVIMTTKEVSQPQVWACKEDGSEASLRFLSDEGVTVQKTIRAEELTEGAIRTLQMDKGISFYFSSFQ
A
>Mature_400_residues
AKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDISSPAHIEMIRGLGVPYVYLISGNSDELESIDEDEEVEEIEEAP
PERDLKADTRKAMRLSQRRFLESVNQCRNVYGKVVSDPEGAYRLSAALVEDLLSHLQEVEKPFLTLVGMDEKEVSVTQHG
ISVAVLAMMIGQALDLPARDLRDIALGSLFHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFGYDMLNRSGLFPKEVLN
IVLHHHEFIDGSGFPDGLTGAKIPITTQIVSLANDYDQQLSGQQASSPQVALGYLFKNRASKHAESLIAVLVKILGIYPP
GTIVKLSDDTVAKVIMTTKEVSQPQVWACKEDGSEASLRFLSDEGVTVQKTIRAEELTEGAIRTLQMDKGISFYFSSFQA

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44552; Mature: 44420

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDISSPAHIEMIRGLGVPYVYLISG
CCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEC
NSDELESIDEDEEVEEIEEAPPERDLKADTRKAMRLSQRRFLESVNQCRNVYGKVVSDPE
CCHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAYRLSAALVEDLLSHLQEVEKPFLTLVGMDEKEVSVTQHGISVAVLAMMIGQALDLPAR
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DLRDIALGSLFHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFGYDMLNRSGLFPKEVL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCCCCCHHHHH
NIVLHHHEFIDGSGFPDGLTGAKIPITTQIVSLANDYDQQLSGQQASSPQVALGYLFKNR
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ASKHAESLIAVLVKILGIYPPGTIVKLSDDTVAKVIMTTKEVSQPQVWACKEDGSEASLR
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEE
FLSDEGVTVQKTIRAEELTEGAIRTLQMDKGISFYFSSFQA
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure 
AKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDISSPAHIEMIRGLGVPYVYLISG
CCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEC
NSDELESIDEDEEVEEIEEAPPERDLKADTRKAMRLSQRRFLESVNQCRNVYGKVVSDPE
CCHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAYRLSAALVEDLLSHLQEVEKPFLTLVGMDEKEVSVTQHGISVAVLAMMIGQALDLPAR
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DLRDIALGSLFHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFGYDMLNRSGLFPKEVL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCCCCCHHHHH
NIVLHHHEFIDGSGFPDGLTGAKIPITTQIVSLANDYDQQLSGQQASSPQVALGYLFKNR
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ASKHAESLIAVLVKILGIYPPGTIVKLSDDTVAKVIMTTKEVSQPQVWACKEDGSEASLR
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEE
FLSDEGVTVQKTIRAEELTEGAIRTLQMDKGISFYFSSFQA
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]