| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969851
Identifier: 113969851
GI number: 113969851
Start: 1776061
End: 1776555
Strand: Direct
Name: 113969851
Synonym: Shewmr4_1509
Alternate gene names: NA
Gene position: 1776061-1776555 (Clockwise)
Preceding gene: 113969850
Following gene: 113969852
Centisome position: 37.74
GC content: 47.88
Gene sequence:
>495_bases TTGCGATTGAATTTTAGTCACATCACTTGGCTCGATGATAAAGGCCATATCAAACCACCGATTTTTTTATATGCCATTCT GGCTTTTCTCGCCCGCGGCTGGTGTATTTTTATTGCCTCGCTTACTCAAGCCAGTGATAGATCAGAATTAGTCAGGCTCT TCTATCCCGAAAAGTCAGACTTTTTGCTTGCACTCGCGGCGGGCTTGGGCGCGGTGGCGCTCTATTTTGTGGTTATCGCG GAGCGTCGTCGCTCACCCTTATTACTGCGTCCGCTGTTTGCCCACCTCAAATGGGGATTGTGGTTATTGCTATTAGTCGA TGCTGCCTTACTCGCACAGCGGCTAATCCACGGGCAATTTTTATTCCATTGGAGTTTGGCCCTCGACGCCTTAGTGTTGT TCTGGTCATGTTTGTATGTTTACAAGTCAAAGCGCCTTAGCTATTACCTCGCCGACTGGCCGAAAGAGAATGCAACTTCG GCTAAAAAAGACTAG
Upstream 100 bases:
>100_bases CTTAAACGTAACAAGCTTGCACGAATTATTCACACCAGCCATTGAATTTAGCCGTTACGCCACCATCTAGTTTATATTGC TTTAGTTTTTACTAAATGGA
Downstream 100 bases:
>100_bases ACTCATCTCGTTGTAATTCCAGCTTTTTATCTAACCTCGAACCACAGAGGGATGATTTGTGTGTACTATCCCTCAGTTTG ATAAGCATTTTTTCATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRLNFSHITWLDDKGHIKPPIFLYAILAFLARGWCIFIASLTQASDRSELVRLFYPEKSDFLLALAAGLGAVALYFVVIA ERRRSPLLLRPLFAHLKWGLWLLLLVDAALLAQRLIHGQFLFHWSLALDALVLFWSCLYVYKSKRLSYYLADWPKENATS AKKD
Sequences:
>Translated_164_residues MRLNFSHITWLDDKGHIKPPIFLYAILAFLARGWCIFIASLTQASDRSELVRLFYPEKSDFLLALAAGLGAVALYFVVIA ERRRSPLLLRPLFAHLKWGLWLLLLVDAALLAQRLIHGQFLFHWSLALDALVLFWSCLYVYKSKRLSYYLADWPKENATS AKKD >Mature_164_residues MRLNFSHITWLDDKGHIKPPIFLYAILAFLARGWCIFIASLTQASDRSELVRLFYPEKSDFLLALAAGLGAVALYFVVIA ERRRSPLLLRPLFAHLKWGLWLLLLVDAALLAQRLIHGQFLFHWSLALDALVLFWSCLYVYKSKRLSYYLADWPKENATS AKKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18926; Mature: 18926
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNFSHITWLDDKGHIKPPIFLYAILAFLARGWCIFIASLTQASDRSELVRLFYPEKSD CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCC FLLALAAGLGAVALYFVVIAERRRSPLLLRPLFAHLKWGLWLLLLVDAALLAQRLIHGQF HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFHWSLALDALVLFWSCLYVYKSKRLSYYLADWPKENATSAKKD HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC >Mature Secondary Structure MRLNFSHITWLDDKGHIKPPIFLYAILAFLARGWCIFIASLTQASDRSELVRLFYPEKSD CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCC FLLALAAGLGAVALYFVVIAERRRSPLLLRPLFAHLKWGLWLLLLVDAALLAQRLIHGQF HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFHWSLALDALVLFWSCLYVYKSKRLSYYLADWPKENATSAKKD HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA