| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is iorA [H]
Identifier: 113969781
GI number: 113969781
Start: 1683808
End: 1684305
Strand: Direct
Name: iorA [H]
Synonym: Shewmr4_1439
Alternate gene names: 113969781
Gene position: 1683808-1684305 (Clockwise)
Preceding gene: 113969780
Following gene: 113969782
Centisome position: 35.78
GC content: 51.81
Gene sequence:
>498_bases ATGGCAATACCATCCTCGGAGGCGGCAAAGGACCAGAGTCTTGCGATGCCTTCCCAAAACCTGACCATTAATGGCAGATC TTTTACCTTAAATGCGGATCCCAATATGCCTATCCTCTGGGCGTTACGGGATATTTTAGGCTTAACGGGCACTAAATATG GCTGCGGCGCCGGACTCTGCGGCGCCTGTACCGTGCATTTAGATGGTCAGCCTGTGCGCGCCTGTTTAACCAGCGTATCC CAGGCGCAGGGCAAACAACTGACCACGATTGAAGGGCTGGATAATCAAAAGCTTAAAAATGCTTGGGCCGAACAGAATGT TCCTCAGTGTGGTTATTGTCAGGCGGGGCAATTAATGTCCGCAGCAGCTTTAGTCACTCAGCATCCAAAACCGTCGGCGG AGCAAATTGATGCTGCCATGTCGGGTAATTTGTGTCGCTGCGGTACCTATCCTCGGATAAAAGCGGCGCTGCAAAGCTAT GCCAAACAGGAGGGCTAA
Upstream 100 bases:
>100_bases AAATGTGGGTGAGCTAGTGGCTGTTCCCTTACCCCATGCCGCGATTGATATTGATACTAAAGCCGATCTTGCGTCGTGGT TGGCACTTAAGGAGTGAGTT
Downstream 100 bases:
>100_bases GATGAGTACATTCACCGCAGTTGAAAATATCAGTCGCCGCGATGTGTTAAAACTCTTCGGCGCCGTTGGGGGCGGTCTCG CCCTTGGCGCCAGTGGCCTC
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTSVS QAQGKQLTTIEGLDNQKLKNAWAEQNVPQCGYCQAGQLMSAAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSY AKQEG
Sequences:
>Translated_165_residues MAIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTSVS QAQGKQLTTIEGLDNQKLKNAWAEQNVPQCGYCQAGQLMSAAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSY AKQEG >Mature_164_residues AIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTSVSQ AQGKQLTTIEGLDNQKLKNAWAEQNVPQCGYCQAGQLMSAAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSYA KQEG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=156, Percent_Identity=37.1794871794872, Blast_Score=77, Evalue=5e-15, Organism=Homo sapiens, GI71773480, Length=101, Percent_Identity=32.6732673267327, Blast_Score=71, Evalue=5e-13, Organism=Escherichia coli, GI1786480, Length=162, Percent_Identity=39.5061728395062, Blast_Score=111, Evalue=2e-26, Organism=Escherichia coli, GI1789232, Length=138, Percent_Identity=38.4057971014493, Blast_Score=91, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17539860, Length=155, Percent_Identity=37.4193548387097, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI32566215, Length=160, Percent_Identity=36.875, Blast_Score=103, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17540638, Length=157, Percent_Identity=36.3057324840764, Blast_Score=100, Evalue=5e-22, Organism=Drosophila melanogaster, GI17737937, Length=157, Percent_Identity=36.9426751592357, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647193, Length=162, Percent_Identity=34.5679012345679, Blast_Score=83, Evalue=9e-17, Organism=Drosophila melanogaster, GI24647201, Length=157, Percent_Identity=32.484076433121, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647195, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647197, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647199, Length=157, Percent_Identity=31.8471337579618, Blast_Score=77, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17397; Mature: 17266
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLC CCCCCCCCCCCHHHCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC GACTVHLDGQPVRACLTSVSQAQGKQLTTIEGLDNQKLKNAWAEQNVPQCGYCQAGQLMS CEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHH AAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSYAKQEG HHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLC CCCCCCCCCCHHHCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC GACTVHLDGQPVRACLTSVSQAQGKQLTTIEGLDNQKLKNAWAEQNVPQCGYCQAGQLMS CEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHH AAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSYAKQEG HHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]