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The map label for this gene is fliC [H]

Identifier: 113969614

GI number: 113969614

Start: 1477679

End: 1479136

Strand: Direct

Name: fliC [H]

Synonym: Shewmr4_1270

Alternate gene names: 113969614

Gene position: 1477679-1479136 (Clockwise)

Preceding gene: 113969613

Following gene: 113969616

Centisome position: 31.4

GC content: 43.55

Gene sequence:

>1458_bases
ATGGCTATTTCAGTAAACACCAACGTCACATCGATGAAGGCGCAAAACCAGTTAAATGGTGCTAACAATAGACTATCTAC
CTCGATGGAGCGCTTATCCTCAGGTTTGCGGATTAACAGCGCTAAAGATGATGCCGCTGGTTTACAAATTTCTAACCGTA
TGACTAGTCAAATCAATGGTATCGGCGTAGCCATGCGTAATGCCAACGATGGTATCTCCATTGCTCAAACCGCCGAAGGC
GCGATGCAAGAATCAACCAATATTCTGCAGCGGATGCGTGATTTATCTTTACAATCTGCAAACGGTTCTAACTCTTCAGA
AGATAGAGCTGCAATGCAGAAAGAACTAAATGCGTTACAGTCTGAACTGACTCGAATTGCAGATACCACTTCTTTTGGTG
GACAAAAGCTATTGGATGGCTCTTATGGAACACAATCATTTCAGGTCGGCGCACAAGCAAATGAGACTATTTCAGTTTCT
TTAAAATCAGTTGCTGCAGCGGATATTGGTGCTTATAAGAGTGACGCGGCAGGTTCTAAATTTGGCGGGGATTTAGTTAC
AGCGGTTGCTGGCTCCAACGGTTCAGCTGGTGGCAATTTATCAATAACACAAGGTACTAAAACCACTACATTTGCAACTG
CTGCTAATGATACCGCTGCCGAGGTTGCTGGTAAAATCAATAAAGCAGGCACAGGTGTGACTGCCACGGCTCAAACAACT
ATTGAAGCTAACTTGACTGAGGCTTTCGATAAAGGTTTGACCATGAAAGTTGATGATGGAAATAGTACCTCCTCATTAGA
TTTGACCGGTATTGGTAATAATGATGACTTAGCTAAAGCCATAAATAACGTATCAGGTGAAACAGGTGTTAGTGCAAAAC
TGGAAAACGGTGTACTAACCATTACTAGCTCCAAAGGTGCTGATATTAGCTTTAGTGATACAGCTACCGCAGGTACAGGT
ACGTTAACACTGAAAAATATTTCAGCGGATGGCACCTCAAGTGCAGTATCAACAATAGACGGTACAGATACGACGGTTGA
CAATGCAACAGCAGTGGGTTCAGTGTCATTAACTGCTTCTTCAGCCTATTCAATTAGCGGAGGTATTGCAGCCGAATTGA
CAACTGAGGTGGCTGGAGTATTTGCTGGTGTGAATAGCGTGGATATTTCATCGGCAGCAGGCTCTCAGTCCGCGCTAGCC
ATTATTGATGGTGCGATCGCAAGCATTGATAGTTCTCGGTCTGATTTAGGTGCAGTACAAAACCGTATGAGTTTTACGAT
TAATAACTTAAGCAATATTCAATCTAACGTAACCGATGCTCGTAGCCGTATTCAAGATGTGGATTTTGCCTCAGAAACTG
CGCAGTTAACCAAACAGCAGATTCTGTCACAAACCTCATCTGCAATGCTGGCACAGGCTAATCAGCTCCCGCAAACAGCA
TTATCCCTATTGGGTTAA

Upstream 100 bases:

>100_bases
GTTACTTGTTCGCTAAGTGAATACGAGTGTTCCTAGGTGAAGTAACAAGATTTAGCCAGGCTTCCACGTCTTGGCACCCA
ACTTAGAAGAGGAATGTAAT

Downstream 100 bases:

>100_bases
TGTAGAGTGGTATTCCTTTGTCTCGTCCTGAAATAAGTTGACACTTATTTCCACCTAAAACGCCTGATGCACCTCATCGG
GCGTTTTGTATTTTAAGGCC

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MAISVNTNVTSMKAQNQLNGANNRLSTSMERLSSGLRINSAKDDAAGLQISNRMTSQINGIGVAMRNANDGISIAQTAEG
AMQESTNILQRMRDLSLQSANGSNSSEDRAAMQKELNALQSELTRIADTTSFGGQKLLDGSYGTQSFQVGAQANETISVS
LKSVAAADIGAYKSDAAGSKFGGDLVTAVAGSNGSAGGNLSITQGTKTTTFATAANDTAAEVAGKINKAGTGVTATAQTT
IEANLTEAFDKGLTMKVDDGNSTSSLDLTGIGNNDDLAKAINNVSGETGVSAKLENGVLTITSSKGADISFSDTATAGTG
TLTLKNISADGTSSAVSTIDGTDTTVDNATAVGSVSLTASSAYSISGGIAAELTTEVAGVFAGVNSVDISSAAGSQSALA
IIDGAIASIDSSRSDLGAVQNRMSFTINNLSNIQSNVTDARSRIQDVDFASETAQLTKQQILSQTSSAMLAQANQLPQTA
LSLLG

Sequences:

>Translated_485_residues
MAISVNTNVTSMKAQNQLNGANNRLSTSMERLSSGLRINSAKDDAAGLQISNRMTSQINGIGVAMRNANDGISIAQTAEG
AMQESTNILQRMRDLSLQSANGSNSSEDRAAMQKELNALQSELTRIADTTSFGGQKLLDGSYGTQSFQVGAQANETISVS
LKSVAAADIGAYKSDAAGSKFGGDLVTAVAGSNGSAGGNLSITQGTKTTTFATAANDTAAEVAGKINKAGTGVTATAQTT
IEANLTEAFDKGLTMKVDDGNSTSSLDLTGIGNNDDLAKAINNVSGETGVSAKLENGVLTITSSKGADISFSDTATAGTG
TLTLKNISADGTSSAVSTIDGTDTTVDNATAVGSVSLTASSAYSISGGIAAELTTEVAGVFAGVNSVDISSAAGSQSALA
IIDGAIASIDSSRSDLGAVQNRMSFTINNLSNIQSNVTDARSRIQDVDFASETAQLTKQQILSQTSSAMLAQANQLPQTA
LSLLG
>Mature_484_residues
AISVNTNVTSMKAQNQLNGANNRLSTSMERLSSGLRINSAKDDAAGLQISNRMTSQINGIGVAMRNANDGISIAQTAEGA
MQESTNILQRMRDLSLQSANGSNSSEDRAAMQKELNALQSELTRIADTTSFGGQKLLDGSYGTQSFQVGAQANETISVSL
KSVAAADIGAYKSDAAGSKFGGDLVTAVAGSNGSAGGNLSITQGTKTTTFATAANDTAAEVAGKINKAGTGVTATAQTTI
EANLTEAFDKGLTMKVDDGNSTSSLDLTGIGNNDDLAKAINNVSGETGVSAKLENGVLTITSSKGADISFSDTATAGTGT
LTLKNISADGTSSAVSTIDGTDTTVDNATAVGSVSLTASSAYSISGGIAAELTTEVAGVFAGVNSVDISSAAGSQSALAI
IDGAIASIDSSRSDLGAVQNRMSFTINNLSNIQSNVTDARSRIQDVDFASETAQLTKQQILSQTSSAMLAQANQLPQTAL
SLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=170, Percent_Identity=49.4117647058824, Blast_Score=155, Evalue=8e-39,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 48986; Mature: 48855

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISVNTNVTSMKAQNQLNGANNRLSTSMERLSSGLRINSAKDDAAGLQISNRMTSQING
CEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCEEEHHHHHHHHCC
IGVAMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSSEDRAAMQKELNALQ
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
SELTRIADTTSFGGQKLLDGSYGTQSFQVGAQANETISVSLKSVAAADIGAYKSDAAGSK
HHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEHHHHHHHHHCCCCCCCCCCC
FGGDLVTAVAGSNGSAGGNLSITQGTKTTTFATAANDTAAEVAGKINKAGTGVTATAQTT
CCCCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEE
IEANLTEAFDKGLTMKVDDGNSTSSLDLTGIGNNDDLAKAINNVSGETGVSAKLENGVLT
EECHHHHHHHCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEECCCEEE
ITSSKGADISFSDTATAGTGTLTLKNISADGTSSAVSTIDGTDTTVDNATAVGSVSLTAS
EECCCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHEECCCCCCCCCCCEEECEEEEECC
SAYSISGGIAAELTTEVAGVFAGVNSVDISSAAGSQSALAIIDGAIASIDSSRSDLGAVQ
CCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHH
NRMSFTINNLSNIQSNVTDARSRIQDVDFASETAQLTKQQILSQTSSAMLAQANQLPQTA
HHHHEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LSLLG
HHHCC
>Mature Secondary Structure 
AISVNTNVTSMKAQNQLNGANNRLSTSMERLSSGLRINSAKDDAAGLQISNRMTSQING
EEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCEEEHHHHHHHHCC
IGVAMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSSEDRAAMQKELNALQ
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
SELTRIADTTSFGGQKLLDGSYGTQSFQVGAQANETISVSLKSVAAADIGAYKSDAAGSK
HHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEHHHHHHHHHCCCCCCCCCCC
FGGDLVTAVAGSNGSAGGNLSITQGTKTTTFATAANDTAAEVAGKINKAGTGVTATAQTT
CCCCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEE
IEANLTEAFDKGLTMKVDDGNSTSSLDLTGIGNNDDLAKAINNVSGETGVSAKLENGVLT
EECHHHHHHHCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEECCCEEE
ITSSKGADISFSDTATAGTGTLTLKNISADGTSSAVSTIDGTDTTVDNATAVGSVSLTAS
EECCCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHEECCCCCCCCCCCEEECEEEEECC
SAYSISGGIAAELTTEVAGVFAGVNSVDISSAAGSQSALAIIDGAIASIDSSRSDLGAVQ
CCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHH
NRMSFTINNLSNIQSNVTDARSRIQDVDFASETAQLTKQQILSQTSSAMLAQANQLPQTA
HHHHEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LSLLG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043; 1697577 [H]