Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is yicG [C]

Identifier: 113969547

GI number: 113969547

Start: 1403994

End: 1404635

Strand: Direct

Name: yicG [C]

Synonym: Shewmr4_1203

Alternate gene names: 113969547

Gene position: 1403994-1404635 (Clockwise)

Preceding gene: 113969546

Following gene: 113969551

Centisome position: 29.83

GC content: 46.73

Gene sequence:

>642_bases
ATGCAAGAAGCGCAATTTATCGGATTATTATGGCTGATTGGAATTTTGGCCGAGGCCATGACTGGGGCATTAGCGGCTGG
CCGTAAACAGATGGACTTATTCGGCGTGGTTATCATTGGCTGCGCAACGGCGATTGGTGGTGGCACCCTAAGAGACATGC
TGCTTGGAAATTACCCTTTGATTTGGGTCGAAAATGTCCATTATCTGATCGCGATTGCATTTGCCTCTTTGTTAACGGTT
GCGATTGCGCCAGTGATGCGTTACCTGTCTAAATTATTTTTGGCCATTGATGCCTTGGGTTTAGCCGTATTCTCGATTGT
TGGCGCACAAAAAACGCTAATGTTAGGGTTTAGTCCAACGATTGCTGTGGTGATGGGACTCGTCACTGGGGTATTTGGTG
GGGTGATCCGCGATATTCTCTGTAACCAAGTGCCTTTGATTTTTAAGAAAGAACTCTATGCGGTGATTTCACTCTTTACC
GCAGGCTTATATATCACGCTCAACGCCTATCAATTGGCGGAGTGGATAAACCTAGTGGTCTGTTTAACGCTGGGCTTTAG
CTTGCGAATGTTAGCACTGCGTTACCATTGGTCTATGCCAACCTTCGACTATCAAGCCAACGGCGACCAGCATACTCACT
AA

Upstream 100 bases:

>100_bases
GATTAAATATTCTAATGACAAAATTTAAATAATCTCATTATTCTAACTCGGAATTATCAGGCAAAATCCGTTCTTTATGC
ATGGGTAATAAGTAGTTTAA

Downstream 100 bases:

>100_bases
TAAAAATGGGGCATTAAATGCCCCATTTTTATGCTTATTGCTGTGCTTGAATGCTTTTTAACGCTTCAAGCGCGGCGTCG
TAATTGGGGTGTTCGGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MQEAQFIGLLWLIGILAEAMTGALAAGRKQMDLFGVVIIGCATAIGGGTLRDMLLGNYPLIWVENVHYLIAIAFASLLTV
AIAPVMRYLSKLFLAIDALGLAVFSIVGAQKTLMLGFSPTIAVVMGLVTGVFGGVIRDILCNQVPLIFKKELYAVISLFT
AGLYITLNAYQLAEWINLVVCLTLGFSLRMLALRYHWSMPTFDYQANGDQHTH

Sequences:

>Translated_213_residues
MQEAQFIGLLWLIGILAEAMTGALAAGRKQMDLFGVVIIGCATAIGGGTLRDMLLGNYPLIWVENVHYLIAIAFASLLTV
AIAPVMRYLSKLFLAIDALGLAVFSIVGAQKTLMLGFSPTIAVVMGLVTGVFGGVIRDILCNQVPLIFKKELYAVISLFT
AGLYITLNAYQLAEWINLVVCLTLGFSLRMLALRYHWSMPTFDYQANGDQHTH
>Mature_213_residues
MQEAQFIGLLWLIGILAEAMTGALAAGRKQMDLFGVVIIGCATAIGGGTLRDMLLGNYPLIWVENVHYLIAIAFASLLTV
AIAPVMRYLSKLFLAIDALGLAVFSIVGAQKTLMLGFSPTIAVVMGLVTGVFGGVIRDILCNQVPLIFKKELYAVISLFT
AGLYITLNAYQLAEWINLVVCLTLGFSLRMLALRYHWSMPTFDYQANGDQHTH

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=200, Percent_Identity=55.5, Blast_Score=209, Evalue=1e-55,
Organism=Escherichia coli, GI1786352, Length=203, Percent_Identity=38.423645320197, Blast_Score=114, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 23188; Mature: 23188

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEAQFIGLLWLIGILAEAMTGALAAGRKQMDLFGVVIIGCATAIGGGTLRDMLLGNYPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
IWVENVHYLIAIAFASLLTVAIAPVMRYLSKLFLAIDALGLAVFSIVGAQKTLMLGFSPT
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCHH
IAVVMGLVTGVFGGVIRDILCNQVPLIFKKELYAVISLFTAGLYITLNAYQLAEWINLVV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHH
CLTLGFSLRMLALRYHWSMPTFDYQANGDQHTH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQEAQFIGLLWLIGILAEAMTGALAAGRKQMDLFGVVIIGCATAIGGGTLRDMLLGNYPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
IWVENVHYLIAIAFASLLTVAIAPVMRYLSKLFLAIDALGLAVFSIVGAQKTLMLGFSPT
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCHH
IAVVMGLVTGVFGGVIRDILCNQVPLIFKKELYAVISLFTAGLYITLNAYQLAEWINLVV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHH
CLTLGFSLRMLALRYHWSMPTFDYQANGDQHTH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]