| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is nemA [H]
Identifier: 113969502
GI number: 113969502
Start: 1360600
End: 1361667
Strand: Direct
Name: nemA [H]
Synonym: Shewmr4_1158
Alternate gene names: 113969502
Gene position: 1360600-1361667 (Clockwise)
Preceding gene: 113969500
Following gene: 113969504
Centisome position: 28.91
GC content: 49.72
Gene sequence:
>1068_bases ATGACGATTGAACATGCAGCGAATTCCGTGGGTAATTTATTCGATACCTACACACTTAATGACACTATTACCTTAAAAAA CCGTATTTTAATGGCGCCATTAACGCGCTGTATGGCCGATGCGGATTTAGTACCGACCGATGACATGGTGGCTTACTATG CTCGCCGCGCCGAAGCGGGATTGATTATCTCCGAAGCGACGATCATTCGCCCTGATGGTCAAGGTTACCCAAATACGCCC GGCATTTTTAATCAAGCGCAGATCGCCGGTTGGCGTAAAGTGACGGATGCTGTGCATGCCAACGGCGGCAAGATTTTTGT GCAGTTATGGCATACTGGCCGTGTCGCGCACCCACATTTCTTCGGTGGCGGCGATGTACTGGCGCCTTCGGCTGAAAAAG TAGAGGGCAGTGTGCCCAGAATGCGTGAGCTGACCTATGTCACTCCAAAAGCGGCAACTCTTGAAGATATTCAGGGTTTA GTCCGCGATTATGCGAAAGCGGCCGAAAACGCGATTGAAGCCGGATTCGATGGGGTTGAGATCCACGGTGCAAACGGATA TTTAATCGATGCATTCTTACACCATGACAGCAACCGTCGTACCGATGAATACGGCGGCACACCGGCCAATATGTCACGCT TTGCCTTAGAAGTGGTTGATGCGATTGCGGCGCGTATTGGTAAAGACAGAACCGGTCTTCGAATTTCTCCCGGCGCCTAT TTCAATATGGCTGTCGATAACCGTGACCGCGCCGTGTTTGATTACCTGTTACCTGAGCTCGAAAAACGTGAACTGGCCTT TGTGCATATCGGTATCTTCGACGACAGCATGGAGTTTGATTACTTAGATGGCCGTGTTTCTAGCTATGTGCGTGCTAACT ATGGCAAAACCTTAGTGGGTGTAGGTGGTTACAGCGCCCAATCGGCAAGTGAAGCGATTGCCGCCGATAAGTTTGATTTA ATTGCGATTGGTCGTCCCTTTATTGCCAACCCAGATTATGTGGCAAGAGTGCGCCAAGGTCATGAATTGGTGACCTATAG CGATGAAATGCTGGCAAGCTTGGTGTAA
Upstream 100 bases:
>100_bases GCTGATTCTAACTAATTTTGAACAAACATTCAAAAATGTTCTTGAATGATCGTTCAAATAAGAATATCTTGAATGCACAT TCAAGAATGGGGCAACAGCA
Downstream 100 bases:
>100_bases CTCAGAGCAGCAATTACCGATAAGAAAGGGTTAGCTTAGCTAACCCTTTTTGCTTTTGGTCCAACTATCAATTGGCTTTA GGGAGCGCCCTCAGGGCATT
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTIEHAANSVGNLFDTYTLNDTITLKNRILMAPLTRCMADADLVPTDDMVAYYARRAEAGLIISEATIIRPDGQGYPNTP GIFNQAQIAGWRKVTDAVHANGGKIFVQLWHTGRVAHPHFFGGGDVLAPSAEKVEGSVPRMRELTYVTPKAATLEDIQGL VRDYAKAAENAIEAGFDGVEIHGANGYLIDAFLHHDSNRRTDEYGGTPANMSRFALEVVDAIAARIGKDRTGLRISPGAY FNMAVDNRDRAVFDYLLPELEKRELAFVHIGIFDDSMEFDYLDGRVSSYVRANYGKTLVGVGGYSAQSASEAIAADKFDL IAIGRPFIANPDYVARVRQGHELVTYSDEMLASLV
Sequences:
>Translated_355_residues MTIEHAANSVGNLFDTYTLNDTITLKNRILMAPLTRCMADADLVPTDDMVAYYARRAEAGLIISEATIIRPDGQGYPNTP GIFNQAQIAGWRKVTDAVHANGGKIFVQLWHTGRVAHPHFFGGGDVLAPSAEKVEGSVPRMRELTYVTPKAATLEDIQGL VRDYAKAAENAIEAGFDGVEIHGANGYLIDAFLHHDSNRRTDEYGGTPANMSRFALEVVDAIAARIGKDRTGLRISPGAY FNMAVDNRDRAVFDYLLPELEKRELAFVHIGIFDDSMEFDYLDGRVSSYVRANYGKTLVGVGGYSAQSASEAIAADKFDL IAIGRPFIANPDYVARVRQGHELVTYSDEMLASLV >Mature_354_residues TIEHAANSVGNLFDTYTLNDTITLKNRILMAPLTRCMADADLVPTDDMVAYYARRAEAGLIISEATIIRPDGQGYPNTPG IFNQAQIAGWRKVTDAVHANGGKIFVQLWHTGRVAHPHFFGGGDVLAPSAEKVEGSVPRMRELTYVTPKAATLEDIQGLV RDYAKAAENAIEAGFDGVEIHGANGYLIDAFLHHDSNRRTDEYGGTPANMSRFALEVVDAIAARIGKDRTGLRISPGAYF NMAVDNRDRAVFDYLLPELEKRELAFVHIGIFDDSMEFDYLDGRVSSYVRANYGKTLVGVGGYSAQSASEAIAADKFDLI AIGRPFIANPDYVARVRQGHELVTYSDEMLASLV
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=331, Percent_Identity=43.202416918429, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1789463, Length=344, Percent_Identity=29.6511627906977, Blast_Score=121, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17559804, Length=355, Percent_Identity=27.0422535211268, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17565138, Length=348, Percent_Identity=27.8735632183908, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI72001454, Length=350, Percent_Identity=26.5714285714286, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17559802, Length=353, Percent_Identity=27.7620396600567, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17564188, Length=359, Percent_Identity=25.9052924791086, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17540738, Length=363, Percent_Identity=25.8953168044077, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6325086, Length=363, Percent_Identity=37.1900826446281, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6321973, Length=363, Percent_Identity=35.5371900826446, Blast_Score=183, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38855; Mature: 38724
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEHAANSVGNLFDTYTLNDTITLKNRILMAPLTRCMADADLVPTDDMVAYYARRAEAG CCCHHHHHHHHHHHEEEECCCEEEECCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC LIISEATIIRPDGQGYPNTPGIFNQAQIAGWRKVTDAVHANGGKIFVQLWHTGRVAHPHF EEEECEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCEE FGGGDVLAPSAEKVEGSVPRMRELTYVTPKAATLEDIQGLVRDYAKAAENAIEAGFDGVE ECCCCEECCCHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE IHGANGYLIDAFLHHDSNRRTDEYGGTPANMSRFALEVVDAIAARIGKDRTGLRISPGAY EECCCCEEEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE FNMAVDNRDRAVFDYLLPELEKRELAFVHIGIFDDSMEFDYLDGRVSSYVRANYGKTLVG EEEEECCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEECCCHHHHHHHHCCCCEEEE VGGYSAQSASEAIAADKFDLIAIGRPFIANPDYVARVRQGHELVTYSDEMLASLV ECCCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECHHHHHHCC >Mature Secondary Structure TIEHAANSVGNLFDTYTLNDTITLKNRILMAPLTRCMADADLVPTDDMVAYYARRAEAG CCHHHHHHHHHHHEEEECCCEEEECCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC LIISEATIIRPDGQGYPNTPGIFNQAQIAGWRKVTDAVHANGGKIFVQLWHTGRVAHPHF EEEECEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCEE FGGGDVLAPSAEKVEGSVPRMRELTYVTPKAATLEDIQGLVRDYAKAAENAIEAGFDGVE ECCCCEECCCHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE IHGANGYLIDAFLHHDSNRRTDEYGGTPANMSRFALEVVDAIAARIGKDRTGLRISPGAY EECCCCEEEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE FNMAVDNRDRAVFDYLLPELEKRELAFVHIGIFDDSMEFDYLDGRVSSYVRANYGKTLVG EEEEECCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEECCCHHHHHHHHCCCCEEEE VGGYSAQSASEAIAADKFDLIAIGRPFIANPDYVARVRQGHELVTYSDEMLASLV ECCCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]