| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969500
Identifier: 113969500
GI number: 113969500
Start: 1359561
End: 1359785
Strand: Direct
Name: 113969500
Synonym: Shewmr4_1156
Alternate gene names: NA
Gene position: 1359561-1359785 (Clockwise)
Preceding gene: 113969499
Following gene: 113969502
Centisome position: 28.89
GC content: 46.22
Gene sequence:
>225_bases ATGCAAGCAACACAAGCGACAGTTACCGTTTTGTATTATGACGCGCCAGTCGGGTTAATTATGCACAACGCGGTGTTAGA AGGTTTACCTGTGAGCGATTCCGGTCGTGTGATGATACCTGCGAGTTTTCGTAAGGGAAAATCCATCATCGCCGTGCTTG AAGGTGAGTGTAAAATATTGAACTCACTCGGTGAGCGGGTATTTGCGCAGGCTAATATAGGTTAA
Upstream 100 bases:
>100_bases GTAAAATGCATCTTGGAGTTTTGTTGTTATAAGAGATGAAGGGAGACTCTTGCCACTTTGATCGATAGCAGTAGATTCTG CTTAATGTGAGTTAAAAGTT
Downstream 100 bases:
>100_bases TAAAAACGAAAAATAGCACTGGTAACACTTGAAACTTAAAGGACGATAAGTGGATTTATTGTCCTTTTGCGTTTTTGGGG CTGCTTAACTAAGCACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MQATQATVTVLYYDAPVGLIMHNAVLEGLPVSDSGRVMIPASFRKGKSIIAVLEGECKILNSLGERVFAQANIG
Sequences:
>Translated_74_residues MQATQATVTVLYYDAPVGLIMHNAVLEGLPVSDSGRVMIPASFRKGKSIIAVLEGECKILNSLGERVFAQANIG >Mature_74_residues MQATQATVTVLYYDAPVGLIMHNAVLEGLPVSDSGRVMIPASFRKGKSIIAVLEGECKILNSLGERVFAQANIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7861; Mature: 7861
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATQATVTVLYYDAPVGLIMHNAVLEGLPVSDSGRVMIPASFRKGKSIIAVLEGECKIL CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHH NSLGERVFAQANIG HHHHHHEEEECCCC >Mature Secondary Structure MQATQATVTVLYYDAPVGLIMHNAVLEGLPVSDSGRVMIPASFRKGKSIIAVLEGECKIL CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHH NSLGERVFAQANIG HHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA