| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is surE [H]
Identifier: 113969464
GI number: 113969464
Start: 1314658
End: 1315407
Strand: Direct
Name: surE [H]
Synonym: Shewmr4_1120
Alternate gene names: 113969464
Gene position: 1314658-1315407 (Clockwise)
Preceding gene: 113969463
Following gene: 113969465
Centisome position: 27.93
GC content: 51.07
Gene sequence:
>750_bases ATGATCCGCATCCTTGTCAGTAATGATGATGGTGTGAATGCGCCGGGGATCAAGGCCTTAACCGAGGCGCTTGCCGAAAT CGCAACCGTGATGACGGTCGCGCCCGATCGTAATTGTTCCGGCGCAAGTAACTCTTTAACCTTGACTAACCCATTAAGAA TTAATAGGTTAGATAATGGTTATATTTCGGTTCACGGTACGCCAACGGATTGCGTTCACTTAGCCATTCGCGAACTTTGT GATGGTGAGCCGGATATGGTGGTATCGGGCATCAATGCTGGCGCGAATATGGGCGATGATACCTTATATTCGGGCACGGT AGCGGCGGCGATGGAGGGGCGTTTTTTGGGTTTCCCCGCCGTTGCGATTTCGCTTAATGGTAAGGCCTTAAAGCATTATC ACTCTGCGGCTGTGTATGCGCGGCGAATCGTGCAGGGGCTGTTAGCGCATCCGATTGCGAGCGATCAGATCCTCAATATC AATGTGCCCGATTTACCGCTCGATGAGATTAAAGGGATCAGGGTGACGCGCCTAGGTGCACGGCATAAGGCCGAAGGCAT AGTGCGAACGCAGGATCCTGCAGGGCGAGAAATTTTCTGGCTTGGCCCTCCGGGTGTTGAACAAGATGCGAGTGAAGGAA CGGATTTCCATGCGATTGCCCATGGTTATGTGTCGATCACTCCCTTAACCGTGGACTTGACCGCGTATAGACAATTATCG GTATTGCAAGATTGGGTAGATAAAATATGA
Upstream 100 bases:
>100_bases AAGCGACAGTCTCACCTGATGCTAATGCTCCTGAGGCCAATCTCGCCACTGAAAGTGATGTGGCTGAGGTCAGTTCAACA GATAATGGCGAGTCCGCTTT
Downstream 100 bases:
>100_bases CTCGAGTTGCCTTAACATCGGCGGTGAATTTAGCTAAAAAGCTTCAGGAGGCGGGGATCCGTCATCCAGCCGTTCTTAAG GCAATATCCCATACCCCGCG
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIRILVSNDDGVNAPGIKALTEALAEIATVMTVAPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELC DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGKALKHYHSAAVYARRIVQGLLAHPIASDQILNI NVPDLPLDEIKGIRVTRLGARHKAEGIVRTQDPAGREIFWLGPPGVEQDASEGTDFHAIAHGYVSITPLTVDLTAYRQLS VLQDWVDKI
Sequences:
>Translated_249_residues MIRILVSNDDGVNAPGIKALTEALAEIATVMTVAPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELC DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGKALKHYHSAAVYARRIVQGLLAHPIASDQILNI NVPDLPLDEIKGIRVTRLGARHKAEGIVRTQDPAGREIFWLGPPGVEQDASEGTDFHAIAHGYVSITPLTVDLTAYRQLS VLQDWVDKI >Mature_249_residues MIRILVSNDDGVNAPGIKALTEALAEIATVMTVAPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELC DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGKALKHYHSAAVYARRIVQGLLAHPIASDQILNI NVPDLPLDEIKGIRVTRLGARHKAEGIVRTQDPAGREIFWLGPPGVEQDASEGTDFHAIAHGYVSITPLTVDLTAYRQLS VLQDWVDKI
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=249, Percent_Identity=59.4377510040161, Blast_Score=292, Evalue=2e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 26596; Mature: 26596
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILVSNDDGVNAPGIKALTEALAEIATVMTVAPDRNCSGASNSLTLTNPLRINRLDNG CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEECCEEEEEECCC YISVHGTPTDCVHLAIRELCDGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPA EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCEEEEHHCCCEECCCE VAISLNGKALKHYHSAAVYARRIVQGLLAHPIASDQILNINVPDLPLDEIKGIRVTRLGA EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCEEEEECCC RHKAEGIVRTQDPAGREIFWLGPPGVEQDASEGTDFHAIAHGYVSITPLTVDLTAYRQLS CHHCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECEEEEEEEEEEHHHHHHHH VLQDWVDKI HHHHHHHCC >Mature Secondary Structure MIRILVSNDDGVNAPGIKALTEALAEIATVMTVAPDRNCSGASNSLTLTNPLRINRLDNG CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEECCEEEEEECCC YISVHGTPTDCVHLAIRELCDGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPA EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCEEEEHHCCCEECCCE VAISLNGKALKHYHSAAVYARRIVQGLLAHPIASDQILNINVPDLPLDEIKGIRVTRLGA EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCEEEEECCC RHKAEGIVRTQDPAGREIFWLGPPGVEQDASEGTDFHAIAHGYVSITPLTVDLTAYRQLS CHHCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECEEEEEEEEEEHHHHHHHH VLQDWVDKI HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA