| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969387
Identifier: 113969387
GI number: 113969387
Start: 1217240
End: 1218241
Strand: Direct
Name: 113969387
Synonym: Shewmr4_1043
Alternate gene names: NA
Gene position: 1217240-1218241 (Clockwise)
Preceding gene: 113969386
Following gene: 113969389
Centisome position: 25.86
GC content: 53.29
Gene sequence:
>1002_bases ATGGACTACCAGCGACTGACTTTGACTTCCCCTTCATCCCAACACTCGGCGCAAACGCCCGCACAAACTTCCCTCTATAT TCCGTACCGAGATGGACAGCTGCATCTGCGCCAGTTGTTGCCTGCTAATGCGGATTTTTCAAAGCCTCCGATCCTGATGT TACATGGCGCCATGTCCAATGGCCGGGTATTTTACAGCCAGAGTGGCCGAGGCTTAGGATGCTTTCTCGCTCAGGCGGGC TTTGCTGTATATGTGCTGGATACGGCGGGCAGAGGTTTGAGTCTACCCAAAATTGCGCGTGGGTTTACTCTGGGGCAAGG GGAGGTGATCCGCGAGCAGCTGCCATTAGTGCAGCAGCATATTTTGAAGATACATCAACAGCGTTGTCAGGAGCAGGGAA AGCCGGCGCCATCGCAGCTGCATTGGTGCGCGCATTCTTGGGGCGGCGTGTTGATGGCAAGCGCCTTAGCGCGTTACCCC GATTTGCAGCAGAGTGTACGGTCATTGCTAACCTTTGGTAGTAAACGCACGATTCGAGTGAAGTCCTTTAAAAAATGGCT GATGGTCGATGTGTTTTGGAATCGCCTCGCCCCGAGTTTAGCCGTGGGGCAGGGGTATCTCGCCGCCGATAAACTGCGTG TCGGCATGGATAACGAGAGCCGGGCCTCATTAACTCAAAGCATAGATTGGGTGCGTGGAGAGTGGCGTGACCATGACGAT GGCTTCGATTATGGCAAGGCGGCGAAAGCGGCCAACTGGCCCGTCGCGTGGTTTATTGCTGGGCAAAACGACACTGTGCT TGGGCATCCCGAAGATGTCGCCGATATGATCTCTGAATGTGGTTTTCGCCAAGTGAAATACACTTTGCTCTCAAAGGCGA ATGGCTTTAAACACGACTATGGTCATGCGGATATGCTGACCCATCTGGATGCGATGAATGACCATTTTCCGCTGATCCGC GATTGGTATCTCGGGTTTGAATTGGCGGTGTTAAAAGACTAG
Upstream 100 bases:
>100_bases TATCTGCTGCAGTTTTAATTTATCCACTGTTTCCGAGTCGTGAACATTAGAGTAATGACTCTTGTTTTTTGACGCTTAGC TGGTAGTTTAGTGTTCATTA
Downstream 100 bases:
>100_bases GGCTATGTACCCTCGTTTATTTTTGCAGAGCAGGATAGCGCAGCTCCACCTCTTGGGTGATATCGAGTAGCTCACCTACA CCGATAATCCGCCAGAGTTG
Product: alpha/beta hydrolase fold domain-containing protein
Products: NA
Alternate protein names: Esterase/Lipase; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Fold Family Hydrolase; Esterase; Alpha/Beta Hydrolase Fold Protein; Lipase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MDYQRLTLTSPSSQHSAQTPAQTSLYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSNGRVFYSQSGRGLGCFLAQAG FAVYVLDTAGRGLSLPKIARGFTLGQGEVIREQLPLVQQHILKIHQQRCQEQGKPAPSQLHWCAHSWGGVLMASALARYP DLQQSVRSLLTFGSKRTIRVKSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWRDHDD GFDYGKAAKAANWPVAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDYGHADMLTHLDAMNDHFPLIR DWYLGFELAVLKD
Sequences:
>Translated_333_residues MDYQRLTLTSPSSQHSAQTPAQTSLYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSNGRVFYSQSGRGLGCFLAQAG FAVYVLDTAGRGLSLPKIARGFTLGQGEVIREQLPLVQQHILKIHQQRCQEQGKPAPSQLHWCAHSWGGVLMASALARYP DLQQSVRSLLTFGSKRTIRVKSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWRDHDD GFDYGKAAKAANWPVAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDYGHADMLTHLDAMNDHFPLIR DWYLGFELAVLKD >Mature_333_residues MDYQRLTLTSPSSQHSAQTPAQTSLYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSNGRVFYSQSGRGLGCFLAQAG FAVYVLDTAGRGLSLPKIARGFTLGQGEVIREQLPLVQQHILKIHQQRCQEQGKPAPSQLHWCAHSWGGVLMASALARYP DLQQSVRSLLTFGSKRTIRVKSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWRDHDD GFDYGKAAKAANWPVAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDYGHADMLTHLDAMNDHFPLIR DWYLGFELAVLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37313; Mature: 37313
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYQRLTLTSPSSQHSAQTPAQTSLYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSN CCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEECCCCC GRVFYSQSGRGLGCFLAQAGFAVYVLDTAGRGLSLPKIARGFTLGQGEVIREQLPLVQQH CEEEEECCCCCCEEHEECCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH ILKIHQQRCQEQGKPAPSQLHWCAHSWGGVLMASALARYPDLQQSVRSLLTFGSKRTIRV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEH KSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWRDHDD HHHHHHHHHHHHHHHHCCHHHHCCCCEEHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCC GFDYGKAAKAANWPVAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDY CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC GHADMLTHLDAMNDHFPLIRDWYLGFELAVLKD CCHHHHHHHHHCCCCCCHHHHHHCCEEEEEECC >Mature Secondary Structure MDYQRLTLTSPSSQHSAQTPAQTSLYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSN CCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEECCCCC GRVFYSQSGRGLGCFLAQAGFAVYVLDTAGRGLSLPKIARGFTLGQGEVIREQLPLVQQH CEEEEECCCCCCEEHEECCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH ILKIHQQRCQEQGKPAPSQLHWCAHSWGGVLMASALARYPDLQQSVRSLLTFGSKRTIRV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEH KSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWRDHDD HHHHHHHHHHHHHHHHCCHHHHCCCCEEHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCC GFDYGKAAKAANWPVAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDY CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC GHADMLTHLDAMNDHFPLIRDWYLGFELAVLKD CCHHHHHHHHHCCCCCCHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA