| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is proA [H]
Identifier: 113969297
GI number: 113969297
Start: 1115617
End: 1116894
Strand: Direct
Name: proA [H]
Synonym: Shewmr4_0953
Alternate gene names: 113969297
Gene position: 1115617-1116894 (Clockwise)
Preceding gene: 113969296
Following gene: 113969301
Centisome position: 23.7
GC content: 52.82
Gene sequence:
>1278_bases TTGAGTCAAACTAATCAAGCGCAATATTTACAACAACTGGGCAGTCAGGCTAAACAAGCCAGCTATGCCTTAGCAAATCT TAGCGCCGCACAGAAAGCGGATTTACTCGAGGCGATTGCCGAGGCCCTGACGCAGAACACTCAGGCGATTCTCGCGGCTA ACGCCAAAGACGTTGCAGCCGCTAAGGCTGAAGGCTTGAATGATGCAATGATCGATAGACTCTTGCTTAACGAGTCGCGT CTAGCGGGGATTATCGGTGATATCGGTGATGTGGTGCGTCTTGCCGATCCCGTTGGCGAAGAGTTTGGCAGCCGCGTGTT GGACAATGGCTTAAGGCTCACGCGCCGCCGTGTTCCACTTGGGGTGATTGGGGTTATCTACGAGGCGCGGCCGAATGTGA CGGTCGATATTGCTGTGTTGGCACTTAAAACCGGTAACGCGGTGATTTTGCGCGGCGGAAAAGAGACGCTCGAATCTAAC AAACTGATTAGCGAAGTGATCCGTGGCGCAATTGCAAGCCAAGGTCTGCCAGTCGATGCGGTGCAGCTGATTGATTCTCC CGATAGAGCCTTAGTCACAGGGCTACTCAAGCTCGACCAATATGTCGATATGATAGTCCCCCGTGGCGGACAAGCCTTAC AGCGCCTTTGCGCCGAGCAAGCGACGATTCCGGTGATCTTAGGCGGCATTGGGATCTGCCATCTGTATGTCGATAAACAT GCCGATCTTGAGCGCGCACTCGAGGTGATTGCCAACGCAAAAGTGCAGCGCCCTACGGTATGTAATGCATTAGACACCTT GCTGGTGGATAACGCGGTTGCCGAGCGTTTTGTGCCGCAAATTGCCGAATACTTACACCGTTTAGGTGTGCGTTTTTCGG TGTGTGAACAAAGCTATGCGCTGCTCGATGGGCTGGGGTTTGATATTTCCCCGGCAACTGAGCAAAGCTTTGCGACCGAA TGGTTGTCTTTGGCCTTAGGCATTAAAGTGGTGAATGACATAGATACAGCTATTGCCCATATCCGTACCTATTCCAGTGG GCACTCGGAGGCGATTCTCACCGATGATATCCATACGGCCACGCATTTTATGAACGAAGTGAATTCGGCTGCTGTGTATG TGAATGCCAGTACTCGCTTTACCGATGGCGGCCAATTTGGCTTGGGTGCCGAGGTGGCCGTAAGCACACAAAAACTCCAT GCCCGCGGTCCTATGGGGCTGGAGGCGTTGACCACCTATAAGTGGTTAGCATGGGGCGATTACACCAGCCGTGCTTAG
Upstream 100 bases:
>100_bases GGGTAAACATTCCGACGAAATCGAGTCAGTGCTCGGTTACGATTATGGTGACGCAATAGTGCACCGCAACGACATGGTCG TCTTATAAGCGAGGTCTGTT
Downstream 100 bases:
>100_bases TGAATTAAGTACACTAAAAGTCACCCATTAAAAAAGCCGCAATAGCGGCTTTTTTAATGGGTAAATGGTGCGGTTAATGG ATAAGCGGAGTGTAAGTGGC
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase [H]
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSQTNQAQYLQQLGSQAKQASYALANLSAAQKADLLEAIAEALTQNTQAILAANAKDVAAAKAEGLNDAMIDRLLLNESR LAGIIGDIGDVVRLADPVGEEFGSRVLDNGLRLTRRRVPLGVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLESN KLISEVIRGAIASQGLPVDAVQLIDSPDRALVTGLLKLDQYVDMIVPRGGQALQRLCAEQATIPVILGGIGICHLYVDKH ADLERALEVIANAKVQRPTVCNALDTLLVDNAVAERFVPQIAEYLHRLGVRFSVCEQSYALLDGLGFDISPATEQSFATE WLSLALGIKVVNDIDTAIAHIRTYSSGHSEAILTDDIHTATHFMNEVNSAAVYVNASTRFTDGGQFGLGAEVAVSTQKLH ARGPMGLEALTTYKWLAWGDYTSRA
Sequences:
>Translated_425_residues MSQTNQAQYLQQLGSQAKQASYALANLSAAQKADLLEAIAEALTQNTQAILAANAKDVAAAKAEGLNDAMIDRLLLNESR LAGIIGDIGDVVRLADPVGEEFGSRVLDNGLRLTRRRVPLGVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLESN KLISEVIRGAIASQGLPVDAVQLIDSPDRALVTGLLKLDQYVDMIVPRGGQALQRLCAEQATIPVILGGIGICHLYVDKH ADLERALEVIANAKVQRPTVCNALDTLLVDNAVAERFVPQIAEYLHRLGVRFSVCEQSYALLDGLGFDISPATEQSFATE WLSLALGIKVVNDIDTAIAHIRTYSSGHSEAILTDDIHTATHFMNEVNSAAVYVNASTRFTDGGQFGLGAEVAVSTQKLH ARGPMGLEALTTYKWLAWGDYTSRA >Mature_424_residues SQTNQAQYLQQLGSQAKQASYALANLSAAQKADLLEAIAEALTQNTQAILAANAKDVAAAKAEGLNDAMIDRLLLNESRL AGIIGDIGDVVRLADPVGEEFGSRVLDNGLRLTRRRVPLGVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLESNK LISEVIRGAIASQGLPVDAVQLIDSPDRALVTGLLKLDQYVDMIVPRGGQALQRLCAEQATIPVILGGIGICHLYVDKHA DLERALEVIANAKVQRPTVCNALDTLLVDNAVAERFVPQIAEYLHRLGVRFSVCEQSYALLDGLGFDISPATEQSFATEW LSLALGIKVVNDIDTAIAHIRTYSSGHSEAILTDDIHTATHFMNEVNSAAVYVNASTRFTDGGQFGLGAEVAVSTQKLHA RGPMGLEALTTYKWLAWGDYTSRA
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate [H]
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family [H]
Homologues:
Organism=Homo sapiens, GI62912457, Length=413, Percent_Identity=37.2881355932203, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI21361368, Length=413, Percent_Identity=37.2881355932203, Blast_Score=258, Evalue=1e-68, Organism=Escherichia coli, GI1786438, Length=416, Percent_Identity=58.6538461538462, Blast_Score=491, Evalue=1e-140, Organism=Caenorhabditis elegans, GI17569967, Length=415, Percent_Identity=35.9036144578313, Blast_Score=264, Evalue=5e-71, Organism=Caenorhabditis elegans, GI17569969, Length=415, Percent_Identity=35.9036144578313, Blast_Score=264, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6324899, Length=431, Percent_Identity=38.7470997679814, Blast_Score=288, Evalue=8e-79, Organism=Drosophila melanogaster, GI21357643, Length=421, Percent_Identity=35.8669833729216, Blast_Score=257, Evalue=1e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.41 [H]
Molecular weight: Translated: 45503; Mature: 45372
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTNQAQYLQQLGSQAKQASYALANLSAAQKADLLEAIAEALTQNTQAILAANAKDVAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH AKAEGLNDAMIDRLLLNESRLAGIIGDIGDVVRLADPVGEEFGSRVLDNGLRLTRRRVPL HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCE GVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLESNKLISEVIRGAIASQGLPVDA EEEEEEEECCCCCEEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHH VQLIDSPDRALVTGLLKLDQYVDMIVPRGGQALQRLCAEQATIPVILGGIGICHLYVDKH HHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCEEEEEEECCC ADLERALEVIANAKVQRPTVCNALDTLLVDNAVAERFVPQIAEYLHRLGVRFSVCEQSYA CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLDGLGFDISPATEQSFATEWLSLALGIKVVNDIDTAIAHIRTYSSGHSEAILTDDIHTA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHH THFMNEVNSAAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWLAWGD HHHHHHCCCEEEEEECCCEECCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHHHHHEEECC YTSRA CCCCC >Mature Secondary Structure SQTNQAQYLQQLGSQAKQASYALANLSAAQKADLLEAIAEALTQNTQAILAANAKDVAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH AKAEGLNDAMIDRLLLNESRLAGIIGDIGDVVRLADPVGEEFGSRVLDNGLRLTRRRVPL HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCE GVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLESNKLISEVIRGAIASQGLPVDA EEEEEEEECCCCCEEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHH VQLIDSPDRALVTGLLKLDQYVDMIVPRGGQALQRLCAEQATIPVILGGIGICHLYVDKH HHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCEEEEEEECCC ADLERALEVIANAKVQRPTVCNALDTLLVDNAVAERFVPQIAEYLHRLGVRFSVCEQSYA CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLDGLGFDISPATEQSFATEWLSLALGIKVVNDIDTAIAHIRTYSSGHSEAILTDDIHTA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHH THFMNEVNSAAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWLAWGD HHHHHHCCCEEEEEECCCEECCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHHHHHEEECC YTSRA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]